GEO help: Mouse over screen elements for information.
Status
Public on Feb 01, 2014
Title
Agilent-048534 Rhesus 60k version of 44k 026806 [Probe Name version]
Technology type
in situ oligonucleotide
Distribution
custom-commercial
Organism
Macaca mulatta
Manufacturer
Agilent Technologies
Manufacture protocol
See manufacturer's web site at http://www.agilent.com/
Description
Rhesus 60k version of 44k 026806 which is v2 of monkey array.
Submission date
Jul 17, 2013
Last update date
Feb 01, 2014
Contact name
Michael Katze
E-mail(s)
data@viromics.washington.edu
Organization name
University of Washington
Department
Microbiology
Lab
Michael G. Katze, Ph.D
Street address
Rosen Building 960 Republican St.
City
Seattle
State/province
WA
ZIP/Postal code
98109-4325
Country
USA
Samples (501)
GSM1190990 , GSM1190991 , GSM1190992 , GSM1190993 , GSM1190994 , GSM1190995
GSM1190996 ,
GSM1190997 ,
GSM1190998 ,
GSM1190999 ,
GSM1191000 ,
GSM1191001 ,
GSM1191002 ,
GSM1191003 ,
GSM1191004 ,
GSM1191005 ,
GSM1191006 ,
GSM1191007 ,
GSM1191008 ,
GSM1191009 ,
GSM1191010 ,
GSM1191011 ,
GSM1191012 ,
GSM1191013 ,
GSM2060069 ,
GSM2060070 ,
GSM2060071 ,
GSM2060072 ,
GSM2060073 ,
GSM2060074 ,
GSM2060075 ,
GSM2060076 ,
GSM2060077 ,
GSM2060078 ,
GSM2060079 ,
GSM2060080 ,
GSM2060081 ,
GSM2060082 ,
GSM2060083 ,
GSM2060084 ,
GSM2060085 ,
GSM2060086 ,
GSM2060087 ,
GSM2060088 ,
GSM2060089 ,
GSM2060090 ,
GSM2060091 ,
GSM2060092 ,
GSM2060093 ,
GSM2060094 ,
GSM2060095 ,
GSM2060096 ,
GSM2060097 ,
GSM2060098 ,
GSM2060099 ,
GSM2060100 ,
GSM2060101 ,
GSM2060102 ,
GSM2463249 ,
GSM2463250 ,
GSM2463251 ,
GSM2463252 ,
GSM2463253 ,
GSM2463254 ,
GSM2463255 ,
GSM2463256 ,
GSM2463257 ,
GSM2463258 ,
GSM2463259 ,
GSM2463260 ,
GSM2463261 ,
GSM2463262 ,
GSM2463263 ,
GSM2463264 ,
GSM2463265 ,
GSM2463266 ,
GSM2463267 ,
GSM2463268 ,
GSM2463269 ,
GSM2463270 ,
GSM2463271 ,
GSM2463272 ,
GSM2463273 ,
GSM2463274 ,
GSM2463275 ,
GSM2463276 ,
GSM2463277 ,
GSM2463278 ,
GSM2463279 ,
GSM2463280 ,
GSM2463281 ,
GSM2463282 ,
GSM2463283 ,
GSM2463284 ,
GSM2463285 ,
GSM2463286 ,
GSM2463287 ,
GSM2463288 ,
GSM2463289 ,
GSM2463290 ,
GSM2463291 ,
GSM2463292 ,
GSM2463293 ,
GSM2463294 ,
GSM2463295 ,
GSM2463296 ,
GSM2463297 ,
GSM2463298 ,
GSM2463299 ,
GSM2463300 ,
GSM2463301 ,
GSM2463302 ,
GSM2463303 ,
GSM2463304 ,
GSM2463305 ,
GSM2463306 ,
GSM2463307 ,
GSM2463308 ,
GSM2463309 ,
GSM2463310 ,
GSM2463311 ,
GSM2463312 ,
GSM2463313 ,
GSM2463314 ,
GSM2463315 ,
GSM2463316 ,
GSM2463317 ,
GSM2463318 ,
GSM2463319 ,
GSM2463320 ,
GSM2463321 ,
GSM2463322 ,
GSM2463323 ,
GSM2463324 ,
GSM2463325 ,
GSM2463326 ,
GSM2463327 ,
GSM2463328 ,
GSM2463329 ,
GSM2463330 ,
GSM2463331 ,
GSM2463332 ,
GSM2463333 ,
GSM2463334 ,
GSM2463335 ,
GSM2463336 ,
GSM2463337 ,
GSM2463338 ,
GSM2463339 ,
GSM2463340 ,
GSM2463341 ,
GSM2463342 ,
GSM2463343 ,
GSM2463344 ,
GSM2463345 ,
GSM2463346 ,
GSM2463347 ,
GSM2463348 ,
GSM2463349 ,
GSM2463350 ,
GSM2463351 ,
GSM2463352 ,
GSM2463353 ,
GSM2463354 ,
GSM2463355 ,
GSM2463356 ,
GSM2463357 ,
GSM2463358 ,
GSM2463359 ,
GSM2463360 ,
GSM2463361 ,
GSM2463362 ,
GSM2463363 ,
GSM2463364 ,
GSM2463365 ,
GSM2463366 ,
GSM2463367 ,
GSM2463368 ,
GSM2463369 ,
GSM2463370 ,
GSM2463371 ,
GSM2463372 ,
GSM2463373 ,
GSM2463374 ,
GSM2463375 ,
GSM2463376 ,
GSM2463377 ,
GSM2463378 ,
GSM2463379 ,
GSM2463380 ,
GSM2463381 ,
GSM2463382 ,
GSM2463383 ,
GSM2463384 ,
GSM2463385 ,
GSM2463386 ,
GSM2463387 ,
GSM2463388 ,
GSM2463389 ,
GSM2463390 ,
GSM2463391 ,
GSM2463392 ,
GSM2463393 ,
GSM2463394 ,
GSM2463395 ,
GSM2463396 ,
GSM2463397 ,
GSM2463398 ,
GSM2463399 ,
GSM2463400 ,
GSM2463401 ,
GSM2463402 ,
GSM2463403 ,
GSM2463404 ,
GSM2463405 ,
GSM2463406 ,
GSM2463407 ,
GSM2463408 ,
GSM2463409 ,
GSM2463410 ,
GSM2463411 ,
GSM2463412 ,
GSM2463413 ,
GSM2463414 ,
GSM2463415 ,
GSM2463416 ,
GSM2463417 ,
GSM2463418 ,
GSM2463419 ,
GSM2463420 ,
GSM2463421 ,
GSM2463422 ,
GSM2463423 ,
GSM2463424 ,
GSM2463425 ,
GSM2463426 ,
GSM2463427 ,
GSM2463428 ,
GSM2463429 ,
GSM2463430 ,
GSM2463431 ,
GSM2463432 ,
GSM2463433 ,
GSM2463434 ,
GSM2463435 ,
GSM2463436 ,
GSM2463437 ,
GSM2463438 ,
GSM2463439 ,
GSM2463440 ,
GSM2463441 ,
GSM2463442 ,
GSM2463443 ,
GSM2463444 ,
GSM2463445 ,
GSM2463446 ,
GSM2463447 ,
GSM2463448 ,
GSM2463449 ,
GSM2463450 ,
GSM2463451 ,
GSM2463452 ,
GSM2463453 ,
GSM2463454 ,
GSM2463455 ,
GSM2463456 ,
GSM2463457 ,
GSM2463458 ,
GSM2463459 ,
GSM2463460 ,
GSM2463461 ,
GSM2463462 ,
GSM2463463 ,
GSM2463464 ,
GSM2463465 ,
GSM2463466 ,
GSM2463467 ,
GSM2463468 ,
GSM2463469 ,
GSM2463470 ,
GSM2463471 ,
GSM2463472 ,
GSM2463473 ,
GSM2463474 ,
GSM2463475 ,
GSM2463476 ,
GSM2463477 ,
GSM2463478 ,
GSM2463479 ,
GSM2463480 ,
GSM2463481 ,
GSM2463482 ,
GSM2463483 ,
GSM2463484 ,
GSM2463485 ,
GSM2463486 ,
GSM2463487 ,
GSM2463488 ,
GSM2463489 ,
GSM2463490 ,
GSM2463491 ,
GSM2463492 ,
GSM2463493 ,
GSM2463494 ,
GSM2463495 ,
GSM2463496 ,
GSM2463497 ,
GSM2463498 ,
GSM2463499 ,
GSM2463500 ,
GSM2463501 ,
GSM2463502 ,
GSM2463503 ,
GSM2463504 ,
GSM2463505 ,
GSM2463506 ,
GSM2463507 ,
GSM2463508 ,
GSM2463509 ,
GSM2463510 ,
GSM2463511 ,
GSM2463512 ,
GSM2463513 ,
GSM2463514 ,
GSM2463515 ,
GSM2463516 ,
GSM2463517 ,
GSM2463518 ,
GSM2463519 ,
GSM2463520 ,
GSM2463521 ,
GSM2463522 ,
GSM2463523 ,
GSM2463524 ,
GSM2463525 ,
GSM2463526 ,
GSM2463527 ,
GSM2463528 ,
GSM2463529 ,
GSM2463530 ,
GSM2463531 ,
GSM2463532 ,
GSM2463533 ,
GSM2463534 ,
GSM2463535 ,
GSM2463536 ,
GSM2463537 ,
GSM2463538 ,
GSM2463539 ,
GSM2463540 ,
GSM2463541 ,
GSM2463542 ,
GSM2463543 ,
GSM2463544 ,
GSM2463545 ,
GSM2463546 ,
GSM2463547 ,
GSM2463548 ,
GSM2463549 ,
GSM2463550 ,
GSM2463551 ,
GSM2463552 ,
GSM2463553 ,
GSM2463554 ,
GSM2463555 ,
GSM2463556 ,
GSM2463557 ,
GSM2463558 ,
GSM2463559 ,
GSM2463560 ,
GSM2463561 ,
GSM2463562 ,
GSM2463563 ,
GSM2463564 ,
GSM2463565 ,
GSM2463566 ,
GSM2463567 ,
GSM2463568 ,
GSM2463569 ,
GSM2463570 ,
GSM2463571 ,
GSM2463572 ,
GSM2463573 ,
GSM2463574 ,
GSM2463575 ,
GSM2463576 ,
GSM2463577 ,
GSM2463578 ,
GSM2463579 ,
GSM2463580 ,
GSM2463581 ,
GSM2463582 ,
GSM2463583 ,
GSM2463584 ,
GSM2463585 ,
GSM2463586 ,
GSM2463587 ,
GSM2463588 ,
GSM2463589 ,
GSM2463590 ,
GSM2463591 ,
GSM2463592 ,
GSM2463593 ,
GSM2463594 ,
GSM2463595 ,
GSM2463596 ,
GSM2463597 ,
GSM2463598 ,
GSM2463599 ,
GSM2463600 ,
GSM2463601 ,
GSM2463602 ,
GSM2463603 ,
GSM2463604 ,
GSM2463605 ,
GSM2463606 ,
GSM2463607 ,
GSM2463608 ,
GSM2463609 ,
GSM2463610 ,
GSM2463611 ,
GSM2463612 ,
GSM2463613 ,
GSM2463614 ,
GSM2463615 ,
GSM2463616 ,
GSM2463617 ,
GSM2463618 ,
GSM2463619 ,
GSM2463620 ,
GSM2463621 ,
GSM2463622 ,
GSM2463623 ,
GSM2463624 ,
GSM2463625 ,
GSM2463626 ,
GSM2463627 ,
GSM2463628 ,
GSM2463629 ,
GSM2463630 ,
GSM2463631 ,
GSM2463632 ,
GSM2463633 ,
GSM2463634 ,
GSM2463635 ,
GSM2463636 ,
GSM2463637 ,
GSM2463638 ,
GSM2463639 ,
GSM2463640 ,
GSM2463641 ,
GSM2463642 ,
GSM2463643 ,
GSM2463644 ,
GSM2463645 ,
GSM2463646 ,
GSM2463647 ,
GSM2463648 ,
GSM2463649 ,
GSM2463650 ,
GSM2463651 ,
GSM2463652 ,
GSM2463653 ,
GSM2463654 ,
GSM2463655 ,
GSM2463656 ,
GSM2463657 ,
GSM2463658 ,
GSM2463659 ,
GSM2463660 ,
GSM2575217 ,
GSM2575218 ,
GSM2575219 ,
GSM2575220 ,
GSM2575221 ,
GSM2575222 ,
GSM2575223 ,
GSM2575224 ,
GSM2575225 ,
GSM2575226 ,
GSM2575227 ,
GSM2575228 ,
GSM2575229 ,
GSM2575230 ,
GSM2575231 ,
GSM2575232 ,
GSM2575233 ,
GSM2575234 ,
GSM2575235 ,
GSM2575236 ,
GSM2575237 ,
GSM2575238 ,
GSM2575239 ,
GSM2575240 ,
GSM2575241 ,
GSM2575242 ,
GSM2575243 ,
GSM2575244 ,
GSM2575245 ,
GSM2575246 ...
Accession list truncated, click here to browse through all related public accessions You can also download a list of all accessions here
Series (4)
GSE48976
Cynomolgus macaque model of H7N9 influenza infection
GSE77824
Multivalent Influenza DNA vaccine induces cross-reactive polyfunctional T lymphocytes and promotes rapid clearance of heterologous challenge strain in non-human primates
GSE93835
Strong Vaccine-Elicited Th1-Biased CD4 T cell Response Abrogates SIV Vaccine Efficacy
GSE97676
Liver Macrophage Infiltration and Inflammation are associated with Antiviral Responses During SIV Infection in Macaques that is Only Partly Reduced during cART
Relations
Alternative to
GPL17463
Data table header descriptions
ID
Agilent Probe Name
SPOT_ID
Spot identifier
CONTROL_TYPE
Control type
REFSEQ
RefSeq Accession
GB_ACC
GenBank or RefSeq Accession
ENTREZ_GENE_ID
Gene ID
GENE_SYMBOL
Gene Symbol
GENE_NAME
Gene Name
UNIGENE_ID
UniGene ID
ENSEMBL_ID
Ensembl ID
ACCESSION_STRING
Accession String
CHROMOSOMAL_LOCATION
Chromosomal Location
DESCRIPTION
Description
SEQUENCE
Sequence
Data table
ID
SPOT_ID
CONTROL_TYPE
REFSEQ
GB_ACC
ENTREZ_GENE_ID
GENE_SYMBOL
GENE_NAME
UNIGENE_ID
ENSEMBL_ID
ACCESSION_STRING
CHROMOSOMAL_LOCATION
DESCRIPTION
SEQUENCE
A_01_P000001
A_01_P000001
FALSE
XM_001103444
704781
MEP1A
meprin A, alpha (PABA peptide hydrolase)
Mmu.9720
gb|XM_001103444
chr4:46665254-46665313
PREDICTED: Macaca mulatta meprin A, alpha (PABA peptide hydrolase) (MEP1A), mRNA [XM_001103444]
AGCAGCACCTCCTCCATGCAGGCCTTATTTTCCCATGGTCAGTGCAGTTTGGGGCAGCTT
A_01_P000002
A_01_P000002
FALSE
chr5:080630462-080630521
AGTATGGTGAGTGCCAAAACAGAGTTATGAACACGATATCTATCTGGAAGCACTGAGAAG
A_01_P000003
A_01_P000003
FALSE
NM_001168609
NM_001168609
704662
CAPZA2
capping protein (actin filament) muscle Z-line, alpha 2
Mmu.173
ref|NM_001168609|gb|JV662796|gb|JV630231|gb|JV595212
chr3:154247892-154247951
Macaca mulatta capping protein (actin filament) muscle Z-line, alpha 2 (CAPZA2), mRNA [NM_001168609]
GGTTTCATTCAATAGAGTATTGCTTATTATACTTGAGTGGAATCCTTTCCTCACATACTC
A_01_P000004
A_01_P000004
FALSE
JV633867
Mmu.20650
gb|JV633867|gb|JV636463|gb|JV665980|gb|JV636465
chr15:78064016-78064075
TSA: Macaca mulatta Mamu_186693 mRNA sequence. [JV633867]
TGCTGCACAAAAGCAGATACTTGAGGAAAACACTATTTCCAAAAGCACGTGTATTGACAA
A_01_P000005
A_01_P000005
FALSE
JV669144
Mmu.22458
gb|JV669144|gb|JV529696|gb|JV602388|gb|JV595058
chr19:6272179-6272238
TSA: Macaca mulatta Mamu_318745 mRNA sequence. [JV669144]
TTGAGGAACTTTTAATTTGCAAGGGTGCCCCCTATGGATGGGGCATTCCAGCTGAGACAC
A_01_P000006
A_01_P000006
FALSE
ENSMMUT00000005571
ens|ENSMMUT00000005571
chr10:56888885-56888826
cystatin 9 (testatin) [Source:HGNC Symbol;Acc:13261] [ENSMMUT00000005571]
GTCTGCGGTTTTATGACTTGGCATTTTAGAAACTCCTCATTGTCCAGGTTCCTCATGTAG
A_01_P000010
A_01_P000010
FALSE
JV051555
707872
CNGA3
cyclic nucleotide gated channel alpha 3
Mmu.26723
ENSMMUT00000029814
ens|ENSMMUT00000029814|gb|JV051555|gb|JU338699|gb|JV706782
chr13:98290363-98290422
cyclic nucleotide gated channel alpha 3 [Source:HGNC Symbol;Acc:2150] [ENSMMUT00000029814]
AGCAACGTACAGGGAGAGCCTTTTAGATTGAAGGCTGGAGTGGTGTCCTAAACCAAAAAA
A_01_P000011
A_01_P000011
FALSE
JU485823
Mmu.4531
gb|JU485823|gb|JV059993|gb|JV650342|gb|JV713913
chr11:103587190-103587131
TSA: Macaca mulatta Mamu_377566 mRNA sequence. [JU485823]
AATTTCCCCTGCTACTTTGAAACCAGAAAATAATGACTGGCCATTCATTATATCTGTCTT
A_01_P000012
A_01_P000012
FALSE
XM_001118474
XM_001118474
722313
LOC722313
barH-like 1 homeobox protein-like
ENSMMUT00000006487
ens|ENSMMUT00000006487|ref|XM_001118474
chr15:6052815-6052756
BarH-like homeobox 1 [Source:HGNC Symbol;Acc:953] [ENSMMUT00000006487]
CAACCTGAACCCCGGCGCGGCGCTCTACCTGTACCGCGGCCCCAGCGCGCCGCCGCCCGC
A_01_P000013
A_01_P000013
FALSE
JV055251
701783
SLC4A1AP
solute carrier family 4 (anion exchanger), member 1, adaptor protein
Mmu.14370
ENSMMUT00000027755
ens|ENSMMUT00000027755|ens|ENSMMUT00000043658|gb|JV055251|gb|JV498921
chr13:27675776-27675835
solute carrier family 4 (anion exchanger), member 1, adaptor protein [Source:HGNC Symbol;Acc:13813] [ENSMMUT00000027755]
TGGTGACTGGCCTTTCCTTCTGTGTTCTTGGCTTCCTAAATTTATCTGCCCATATGATTC
A_01_P000017
A_01_P000017
FALSE
JV056871
705802
ZDHHC20
zinc finger, DHHC-type containing 20
Mmu.18098
ENSMMUT00000010310
ens|ENSMMUT00000010310|gb|JV056871|gb|JV577181|gb|JV463322
chr17:2005334-2005275
zinc finger, DHHC-type containing 20 [Source:HGNC Symbol;Acc:20749] [ENSMMUT00000010310]
TAAAAAAGAAGCTTTGTACAGTCCTGGGATCCACAGACGCACTGCTCCAGAGCGGAACGA
A_01_P000018
A_01_P000018
FALSE
JU471134
714092
ATG16L1
autophagy related 16-like 1 (S. cerevisiae)
Mmu.33997
ENSMMUT00000032865
ens|ENSMMUT00000032865|ens|ENSMMUT00000032859|ens|ENSMMUT00000032861|ens|ENSMMUT00000032863
chr12:97182605-97182664
autophagy-related protein 16-1 [Source:RefSeq peptide;Acc:NP_001248040] [ENSMMUT00000032865]
TCACGGGCCAGGGCACATCTTTTATTTATTTCGTTATGTTGCCCAACAGAACTTGATTGT
A_01_P000020
A_01_P000020
FALSE
JU475178
718197
LOC718197
ly6/PLAUR domain-containing protein 3-like
Mmu.1278
ENSMMUT00000045066
ens|ENSMMUT00000045066|ens|ENSMMUT00000024980|gb|JU475178|gb|XM_001102229
unmapped
LY6/PLAUR domain containing 3 [Source:HGNC Symbol;Acc:24880] [ENSMMUT00000045066]
ACCGTGCCTTATGCCTGTGTGTGATCAGTTTCTGGCACACAGATGCCTCAATAAAGATTT
A_01_P000023
A_01_P000023
FALSE
NM_001194236
NM_001194236
712971
MED31
mediator complex subunit 31
Mmu.18453
ENSMMUT00000005363
ref|NM_001194236|ens|ENSMMUT00000005363|gb|JU475797|gb|JV508588
chr16:6360597-6360538
Macaca mulatta mediator complex subunit 31 (MED31), mRNA [NM_001194236]
GGCAGGACAACTAGTGGTTAATTACTAATTGGACTCTTGACTTTAGAACAAACATGAGGA
A_01_P000024
A_01_P000024
FALSE
NM_001261345
NM_001261345
706690
GPBP1L1
GC-rich promoter binding protein 1-like 1
Mmu.12403
ENSMMUT00000002774
ref|NM_001261345|ens|ENSMMUT00000002774|gb|JV043934|gb|JU471282
chr1:48534918-48534859
Macaca mulatta GC-rich promoter binding protein 1-like 1 (GPBP1L1), mRNA [NM_001261345]
GGGGGGAAATGTGAATTCAGACACAACTGTTCTCTTTTTAGCAGATACTTTTTTGATGCA
A_01_P000028
A_01_P000028
FALSE
chr20:056757809-056757868
ATGATGGACTTTGTACATGAATATGTTCTGTACAAGTACTCTTTCTGTCACTAGTACTAC
A_01_P000029
A_01_P000029
FALSE
JV058150
Mmu.35743
gb|JV058150|gb|JV648509
chr10:13504048-13503989
TSA: Macaca mulatta Mamu_441393 mRNA sequence. [JV058150]
GTCCACCTTATGTTGCACACATATAACATTGTGTAAATTGCATACTATGGTTTGACTTGC
A_01_P000030
A_01_P000030
FALSE
JV612544
Mmu.22685
gb|JV612544|gb|JU484147|gb|JV679776|gb|JV577852
chr2:69798842-69798901
TSA: Macaca mulatta Mamu_194403 mRNA sequence. [JV612544]
TGGAAAAGACTTAGACCTTGACCTGGGTTCTGGGTATATTTGCACTTTTGAGACTGGTAG
A_01_P000031
A_01_P000031
FALSE
696683
ORC5
origin recognition complex, subunit 5
ENSMMUT00000016896
ens|ENSMMUT00000016896
chr3:141548760-141548701
origin recognition complex subunit 5 [Source:RefSeq peptide;Acc:NP_001248017] [ENSMMUT00000016896]
ATTATATCATGAAAATCAAGCAGTTTCTATTGCTTTAAATGCTTTTATTAAAGCAATCTA
A_01_P000036
A_01_P000036
FALSE
JV457416
693763
APOOL
apolipoprotein O-like
Mmu.21167
ENSMMUT00000047910
ens|ENSMMUT00000047910|ens|ENSMMUT00000047909|gb|JV457416|gb|JV571748
chrX:83892488-83892547
apolipoprotein O-like [Source:HGNC Symbol;Acc:24009] [ENSMMUT00000047910]
AAGCTGAAGTAGACTGCATACAGAGACTACATAGAAAACTACAAGATGTGTGACGTTGCA
Total number of rows: 43603 Table truncated, full table size 12459 Kbytes .
Supplementary data files not provided