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GEO accession:
Platform GPL18228
Query DataSets for GPL18228
Status
Public on Feb 14, 2014
Title
Custom Mycobacterium Expression Design OID39789
Technology type
in situ oligonucleotide
Distribution
custom-commercial
Organism
Mycobacterium tuberculosis
Manufacturer
NimbleGen
Manufacture protocol
Whole M.tb H37Rv genome gene expression array
Description
M.tb genome array from Nimblegen 120910_Mtub_AD_expr.ndf with probes for all 3999 mycobacterial genes
Submission date
Jan 27, 2014
Last update date
Feb 14, 2014
Contact name
prachi singh
Organization name
university of notredame
Department
biological sciences
Street address
130 Galvin
City
Notredame
State/province
indiana
ZIP/Postal code
46556
Country
USA
Samples (4)
GSM1315564
,
GSM1315565
,
GSM1315566
,
GSM1315567
Series (1)
GSE54444
Expression analysis for detection of mycobacterial transcripts present in exosomes derived from M.tb infected macrophages
Data table header descriptions
ID
GENOME_ACC
GenBank accession number of Mycobacterium tuberculosis H37Rv
SPOT_ID
Data table
ID
GENOME_ACC
SPOT_ID
GI_15607143:1-1524
NC_000962
GI_15607143:1-1524
GI_15607144:1-1209
NC_000962
GI_15607144:1-1209
GI_15607145:1-1158
NC_000962
GI_15607145:1-1158
GI_15607146:1-564
NC_000962
GI_15607146:1-564
GI_15607147:1-2145
NC_000962
GI_15607147:1-2145
GI_15607148:1-2517
NC_000962
GI_15607148:1-2517
GI_15607149:1-915
NC_000962
GI_15607149:1-915
GI_15607150:1-438
NC_000962
GI_15607150:1-438
GI_15607151:1-549
NC_000962
GI_15607151:1-549
GI_15607152:1-426
NC_000962
GI_15607152:1-426
GI_15607153:1-282
NC_000962
GI_15607153:1-282
GI_15607154:1-789
NC_000962
GI_15607154:1-789
GI_15607156:1-1881
NC_000962
GI_15607156:1-1881
GI_15607157:1-1296
NC_000962
GI_15607157:1-1296
GI_15607158:1-1476
NC_000962
GI_15607158:1-1476
GI_15607159:1-1410
NC_000962
GI_15607159:1-1410
GI_15607160:1-1545
NC_000962
GI_15607160:1-1545
GI_15607161:1-468
NC_000962
GI_15607161:1-468
GI_15607162:1-1584
NC_000962
GI_15607162:1-1584
GI_15607163:1-969
NC_000962
GI_15607163:1-969
Total number of rows:
3998
Table truncated, full table size
182 Kbytes
.
Download family
Format
SOFT formatted family file(s)
SOFT
MINiML formatted family file(s)
MINiML
Supplementary file
Size
Download
File type/resource
GPL18228_120910_Mtub_AD_expr.ndf.gz
4.4 Mb
(ftp)
(http)
NDF
GPL18228_120910_Mtub_AD_expr.pos.gz
1.1 Mb
(ftp)
(http)
POS
GPL18228_myco_probes.txt.gz
1.5 Mb
(ftp)
(http)
TXT
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