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Series GSE54444 Query DataSets for GSE54444
Status Public on Sep 15, 2014
Title Expression analysis for detection of mycobacterial transcripts present in exosomes derived from M.tb infected macrophages
Platform organism Mycobacterium tuberculosis
Sample organism Mycobacterium tuberculosis H37Rv
Experiment type Expression profiling by array
Summary Mycobacterial transcripts were identified in exosomes released from M.tb infected RAW264.7 macrophages that were not present in uninfected exosomes suggesting export of mycobacterial RNA via exosomes
Mycobacterial RNA was used as positive control and RNA from exosomes released from uninfected macrophages was used as negative control
 
Overall design Total RNA isolated from exosomes or mycobacteria was reverse transcribed to ds cDNA which wa slabeled with Cy3 and hybridized to custom whole M.tb genome array from Nimblegen 120910_Mtub_AD_expr.ndf
 
Contributor(s) Singh P, Schorey J
Citation(s) 25753779
Submission date Jan 27, 2014
Last update date Mar 16, 2015
Contact name prachi singh
Organization name university of notredame
Department biological sciences
Street address 130 Galvin
City Notredame
State/province indiana
ZIP/Postal code 46556
Country USA
 
Platforms (1)
GPL18228 Custom Mycobacterium Expression Design OID39789
Samples (4)
GSM1315564 M.tb
GSM1315565 Rv exoquick
GSM1315566 Rv sucrose
Relations
BioProject PRJNA236531

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE54444_RAW.tar 12.3 Mb (http)(custom) TAR (of PAIR)
Processed data included within Sample table

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