 |
 |
GEO help: Mouse over screen elements for information. |
|
| Status |
Public on Jan 23, 2015 |
| Title |
Illumina HiSeq 2500 (Solanum lycopersicum) |
| Technology type |
high-throughput sequencing |
| Distribution |
virtual |
| Organism |
Solanum lycopersicum |
| |
|
| |
|
| Submission date |
Jan 23, 2015 |
| Last update date |
Jun 14, 2018 |
| Contact name |
GEO |
| Country |
USA |
| |
|
| Samples (465)
|
GSM1590644, GSM1590645, GSM1590646, GSM1590647, GSM1590648, GSM1590649
GSM1590650, GSM1590651, GSM1590652, GSM1590653, GSM1590654, GSM1590655, GSM1661202, GSM1661203, GSM1661204, GSM1661205, GSM1661206, GSM1661207, GSM1661208, GSM1661209, GSM1857767, GSM1857768, GSM1857769, GSM1857770, GSM1857771, GSM1857772, GSM1857773, GSM1857774, GSM1857775, GSM1857776, GSM1857777, GSM1857778, GSM1857779, GSM1857780, GSM1857781, GSM1857782, GSM1936127, GSM1936128, GSM1936129, GSM1936130, GSM1936131, GSM1936132, GSM1936133, GSM1936134, GSM2388478, GSM2388479, GSM2411746, GSM2411747, GSM2454427, GSM2454428, GSM2454429, GSM2454430, GSM2454431, GSM2454432, GSM2454615, GSM2454616, GSM2454617, GSM2454618, GSM2454619, GSM2454620, GSM2454621, GSM2454622, GSM2454623, GSM2454624, GSM2454625, GSM2454626, GSM2454627, GSM2454628, GSM2454629, GSM2454645, GSM2454646, GSM2454647, GSM2454648, GSM2454649, GSM2454650, GSM2454651, GSM2454652, GSM2454653, GSM2454654, GSM2454655, GSM2454656, GSM2454657, GSM2454658, GSM2454659, GSM2459854, GSM2459855, GSM2459856, GSM2459857, GSM2480915, GSM2480916, GSM2480917, GSM2491691, GSM2491692, GSM2491693, GSM2491694, GSM2491695, GSM2491696, GSM2491697, GSM2491698, GSM2491699, GSM2491700, GSM2491701, GSM2491702, GSM2496416, GSM2496417, GSM2496418, GSM2496419, GSM2496420, GSM2496421, GSM2496422, GSM2496423, GSM2496442, GSM2496443, GSM2496444, GSM2496445, GSM2522413, GSM2522414, GSM2522415, GSM2522416, GSM2522417, GSM2522418, GSM2522419, GSM2522420, GSM2522421, GSM2522422, GSM2522423, GSM2522424, GSM2522425, GSM2522426, GSM2522427, GSM2522428, GSM2522429, GSM2522430, GSM2522431, GSM2522432, GSM2522433, GSM2522434, GSM2522435, GSM2522436, GSM2522437, GSM2522438, GSM2559477, GSM2722734, GSM2722735, GSM2722736, GSM2722737, GSM2722738, GSM2722739, GSM2722740, GSM2722741, GSM2722742, GSM2732745, GSM2732746, GSM2732747, GSM2732748, GSM2732749, GSM2732750, GSM2732751, GSM2732752, GSM2732753, GSM2732754, GSM2732755, GSM2732756, GSM2732757, GSM2735609, GSM2735611, GSM2735613, GSM2735615, GSM2735617, GSM2735618, GSM2735619, GSM2735620, GSM2735621, GSM2735622, GSM2735623, GSM2735624, GSM2735625, GSM2735626, GSM2735627, GSM2735628, GSM2735629, GSM2735630, GSM2735631, GSM2735632, GSM2735633, GSM2741396, GSM2741397, GSM2741398, GSM2741399, GSM2741415, GSM2741416, GSM2741417, GSM2741418, GSM2741432, GSM2741433, GSM2741434, GSM2741435, GSM2850648, GSM2850649, GSM2850650, GSM2850651, GSM2850652, GSM2850653, GSM2967009, GSM2967010, GSM2967011, GSM2967012, GSM2967013, GSM2967014, GSM2967015, GSM2967016, GSM2967017, GSM2967018, GSM2967019, GSM2967020, GSM2967021, GSM2967022, GSM2967023, GSM2967024, GSM2967025, GSM2967026, GSM3208897, GSM3425859, GSM3425860, GSM3425861, GSM3425862, GSM3425863, GSM3425864, GSM3425865, GSM3425866, GSM3425867, GSM3425868, GSM3425869, GSM3425870, GSM3425871, GSM3425872, GSM3425873, GSM3425874, GSM3425875, GSM3425876, GSM3425877, GSM3425878, GSM3425879, GSM3425880, GSM3425881, GSM3425882, GSM3717030, GSM3717031, GSM3717032, GSM3717033, GSM3855524, GSM3855525, GSM3855526, GSM3855527, GSM3855528, GSM3855529, GSM3855530, GSM3855531, GSM3855532, GSM3855533, GSM3855534, GSM3855535, GSM3855536, GSM3855537, GSM3855538, GSM3855539, GSM3855540, GSM3855541, GSM3855542, GSM3855543, GSM3855544, GSM3855545, GSM3855546, GSM3855547, GSM3855548, GSM3855549, GSM3855550, GSM3855551, GSM3855552, GSM3855553, GSM3855554, GSM3855555, GSM3995506, GSM3995507, GSM3995508, GSM3995509, GSM3995510, GSM3995511, GSM3995512, GSM3995513, GSM3995514, GSM3995515, GSM3995516, GSM3995517, GSM4074979, GSM4074980, GSM4074981, GSM4074982, GSM4074983, GSM4074984, GSM4173803, GSM4173804, GSM4173805, GSM4173806, GSM4173807, GSM4173808, GSM4173809, GSM4173810, GSM4173811, GSM4173812, GSM4173813, GSM4173814, GSM4173815, GSM4173816, GSM4173817, GSM4173818, GSM4277876, GSM4277877, GSM4277878, GSM4277879, GSM4277880, GSM4277881, GSM4277882, GSM4277883, GSM4277884, GSM4570167, GSM4570168, GSM4570169, GSM4570170, GSM4570171, GSM4570172, GSM4570173, GSM4570174, GSM4570175, GSM4570176, GSM4570177, GSM4570178, GSM4570179, GSM4570180, GSM4570181, GSM4570182, GSM4570183, GSM4570184, GSM4570185, GSM4570186, GSM4570187, GSM4570188, GSM4570189, GSM4570190, GSM4570191, GSM4570192, GSM4570193, GSM4570194, GSM4570195, GSM4570196, GSM4570197, GSM4570198, GSM4570199, GSM4570200, GSM4570201, GSM4570202, GSM4570203, GSM4570204, GSM4570205, GSM5050310, GSM5050311, GSM5050312, GSM5050313, GSM5050314, GSM5050315, GSM5731680, GSM5731681, GSM5731682, GSM5731683, GSM5731684, GSM5731685, GSM5775810, GSM5775811, GSM5775812, GSM5775813, GSM5775814, GSM5775815, GSM5905615, GSM5905616, GSM5905617, GSM5905618, GSM5905619, GSM5905620, GSM5905621, GSM5905622, GSM5905623, GSM5905624, GSM5905625, GSM5905626, GSM5974582, GSM5974583, GSM5974584, GSM5974585, GSM5974586, GSM5974587, GSM5974588, GSM5974589, GSM5974590, GSM5974591, GSM5974592, GSM5974593, GSM6005068, GSM6005070, GSM6005071, GSM6005072, GSM6005075, GSM6005076, GSM6005078, GSM6005079, GSM6005080, GSM6005081, GSM6005082, GSM6005083, GSM6005084, GSM6005087, GSM6005088, GSM6005089, GSM6005090, GSM6005093, GSM6005094, GSM6005095, GSM6005096, GSM6005097, GSM6005098, GSM6005100, GSM6005101, GSM6005102, GSM6005104, GSM6005105, GSM6005106, GSM6005107, GSM6005108, GSM6005109, GSM6005110, GSM6005111, GSM6005112, GSM6005113, GSM6005114, GSM6005115, GSM6043859, GSM6043860, GSM6043861, GSM6043862, GSM6043863, GSM6043864, GSM6043865, GSM6043866, GSM6043867, GSM6043868, GSM6043869, GSM6043870, GSM7474772, GSM8060087, GSM8060088, GSM8060089, GSM8060090, GSM8060091, GSM8060092, GSM8060093, GSM8060094
|
| Series (47)
|
| GSE65242 |
Global transcriptomic changes induced by manipulate MSH1 gene in tomato using next generation sequencing |
| GSE68018 |
Next Generation Sequencing of tomato WT, M82 and pro∆GRAS mutant treated with Gibberellin |
| GSE72216 |
Spatial-temporal order of regulation in tomato early fruit development |
| GSE74827 |
Spatial-temporal order of regulation in tomato early fruit development |
| GSE74828 |
Transcriptome datasets of big-fruit tomato MM, cherry tomato CC and wild tomato PP |
| GSE85516 |
Diversification of Root Hair Development Genes in Vascular Plants |
| GSE89772 |
A naturally unique variation in Al-activated malate transporter 9 determines fruit malate in cultivated tomato |
| GSE90747 |
The B-type cyclin gene, SlCycB2, is essential to multicellular trichome-mediated defense against herbivores and reproductive organ development in tomato |
| GSE93540 |
Transcriptome analysis of tomato leafless (lfs) mutants and TIBA-induced pins |
| GSE93556 |
Regulatory divergence controlling wound-responsive gene expression in domesticated and wild tomatoes |
| GSE93648 |
Gene family Diversification in conserved miRNAs target sites in Tomato revealed as layers of interaction with a nuclear-replicating virus. |
| GSE94903 |
Critical roles of DNA demethylation in the activation of ripening-induced genes and inhibition of ripening-repressed genes in tomato fruit |
| GSE95110 |
Transcriptome analysis of the shoot apical meristem (SAM) of WT tomato and the late termination (ltm) mutant [exp1] |
| GSE95114 |
Transcriptome analysis of the shoot apical meristem (SAM) of WT tomato and the late termination (ltm) mutant [exp2] |
| GSE95117 |
Transcriptome analysis of the shoot apical meristem (SAM) of WT tomato and the late termination (ltm) mutant |
| GSE95710 |
Global gene regulation in tomato plant (Solanum lycopersicum) responding to vector (Bactericera cockerelli) feeding and pathogen (‘Candidatus Liberibacter solanacearum’) infection |
| GSE97192 |
Paramutation of natural epialleles in tomato [BiSulfite-seq] |
| GSE97247 |
Paramutation of natural epialleles in tomato |
| GSE102070 |
Changes in transcript abundance in the shoot apex highlight chloroplast development |
| GSE102273 |
Critical function of DNA methyltransferase 1 in tomato development and regulation of the DNA methylome and transcriptome |
| GSE102373 |
Mechanisms of RNA virus induced plant death |
| GSE102374 |
RNA transcriptome analysis of floral buds of male-fertile and male-sterile tomato |
| GSE102576 |
Comparison of sRNA populations obtained using HD or standard Illumina adapters in S Lycopersicum without TAP treatment |
| GSE102579 |
Comparison of sRNA populations obtained using HD or standard Illumina adapters in S Lycopersicum (rdr6 mutant) without TAP treatment |
| GSE102581 |
Comparison of sRNA populations obtained using HD or standard Illumina adapters in S Lycopersicum with TAP treatment |
| GSE106811 |
Global transcriptome of Arabidopsis thaliana and Solanum lycopersicum infected by S. sclerotiorum |
| GSE109772 |
Transcription Factor-Mediated Control of Anthocyanin Biosynthesis in Vegetative Tissues of Tomato |
| GSE116095 |
Identification of Exosome-Like Nanoparticle Derived MicroRNAs from Eleven Edible Plants |
| GSE121089 |
Genome wide identification of circRNAs, miRNAs and their targets in tomatoes at heat, drought and their combination |
| GSE129610 |
Lasting expression changes in tomato after tomato psyllid (Bactericera cockerelli) infestation |
| GSE132280 |
Florigen Accelerates Secondary Cell Wall Biogenesis to Harmonize Vascular Maturation with flowering and reproductive phase Development |
| GSE135232 |
Transcriptome Analysis of Tomato Genotypes in Response to Bacterial spot (Xanthomonas perforans) Race T4 Inoculation |
| GSE137303 |
Effect on tomato plants of asymptomatic infection with southern tomato virus |
| GSE140537 |
RNA-seq data of Phytophthora infestans 88069 infected tomato leaves |
| GSE143999 |
The role of DELLA protein in tomato plant response to water-deficit stress |
| GSE151277 |
Transcription profiles of tomato (Solanum lycopersicum) seedlings response to drought and heat stress |
| GSE165807 |
Lasting consequences of psyllid (Bactericera cockerelli L.) infestation on tomato defense, gene expression, and growth |
| GSE190780 |
Long-lasting priming by β-amino butyric acid is marked by DNA hypomethylation |
| GSE190782 |
Long-lasting priming by β-amino butyric acid is marked by DNA hypomethylation. |
| GSE193170 |
BS-seq of WT, slnor, and sldml2 |
| GSE196951 |
Effects of ‘Candidatus Liberibacter solanacearum’ haplotypes A and B on tomato gene expression and geotropism |
| GSE199518 |
The tomato receptor-like cytoplasmic kinase Fir1 is involved in flagellin signaling and regulates pre-invasion immunity |
| GSE200034 |
Next Generation Sequencing of tomato germplasm for cold tolerance and yield studies |
| GSE200795 |
Transcriptomic analysis of the tomato plant response to Tuta absoluta herbivory |
| GSE234786 |
Detection of plant microRNAs in edible-plant based products |
| GSE254910 |
Exogenous Melatonin RegulatesAlternaria brassicaeReproduction and Pathogenicity in a Dose-Dependent Manner [miRNA] |
| GSE254911 |
Exogenous Melatonin RegulatesAlternaria brassicaeReproduction and Pathogenicity in a Dose-Dependent Manner [miRNA_degradome] |
|
| Supplementary data files not provided |
|
|
|
|
 |
Less...
More...