Data table |
ID |
SPOT_ID |
seqname |
strand |
start |
stop |
total_probes |
gene_assignment |
mrna_assignment |
swissprot |
unigene |
GO_biological_process |
GO_cellular_component |
GO_molecular_function |
protein_domains |
crosshyb_type |
category |
18450782 |
transcript_cluster_id: 18450782 |
chrI |
+ |
12773647 |
12782247 |
27 |
NM_060836 // B0019.2 // hypothetical protein // --- // 173147 /// B0019.2 // B0019.2 // hypothetical protein // --- // 173147 |
"NM_060836 // RefSeq // Caenorhabditis elegans Uncharacterized protein (B0019.2) |
partial mRNA. // chrI // 100 // 93 // 25 // 25 // 0 /// B0019.2 // ENSEMBL // Caenorhabditis elegans Protein B0019.2 (B0019.2) mRNA |
complete cds. [gene_biotype:protein_coding transcript_biotype:protein_coding] // chrI // 100 // 100 // 27 // 27 // 0" |
NM_060836 // G5EBL4 /// B0019.2 // G5EBL4 |
NM_060836 // Cel.19323 // --- /// B0019.2 // Cel.19323 // --- |
--- |
--- |
NM_060836 // GO:0003677 // DNA binding // inferred from electronic annotation /// B0019.2 // GO:0003677 // DNA binding // inferred from electronic annotation |
B0019.2 // Pfam // IPR006570 // SPK domain |
18450797 |
transcript_cluster_id: 18450797 |
chrI |
+ |
6028488 |
6033460 |
29 |
NM_001025782 // vps-34 // Phosphatidylinositol 3-kinase // --- // 172280 /// NM_001025783 // vps-34 // Phosphatidylinositol 3-kinase // --- // 172280 /// NM_059340 // vps-34 // Phosphatidylinositol 3-kinase // --- // 172280 /// B0025.1a // vps-34 // Phosphatidylinositol 3-kinase // --- // 172280 /// B0025.1b // vps-34 // Phosphatidylinositol 3-kinase // --- // 172280 /// B0025.1c.1 // vps-34 // Phosphatidylinositol 3-kinase // --- // 172280 /// B0025.1c.2 // vps-34 // Phosphatidylinositol 3-kinase // --- // 172280 |
"NM_001025782 // RefSeq // Caenorhabditis elegans Phosphatidylinositol 3-kinase (vps-34) |
partial mRNA. // chrI // 100 // 48 // 14 // 14 // 0 /// NM_001025783 // RefSeq // Caenorhabditis elegans Phosphatidylinositol 3-kinase (vps-34) |
partial mRNA. // chrI // 100 // 72 // 21 // 21 // 0 /// NM_059340 // RefSeq // Caenorhabditis elegans Phosphatidylinositol 3-kinase (vps-34) |
partial mRNA. // chrI // 100 // 72 // 21 // 21 // 0 /// B0025.1a // ENSEMBL // Caenorhabditis elegans Protein VPS-34 |
isoform c (vps-34) mRNA |
complete cds. [gene_biotype:protein_coding transcript_biotype:protein_coding] // chrI // 100 // 86 // 25 // 25 // 0 /// B0025.1b // ENSEMBL // Caenorhabditis elegans Protein VPS-34 |
isoform c (vps-34) mRNA |
complete cds. [gene_biotype:protein_coding transcript_biotype:protein_coding] // chrI // 100 // 76 // 22 // 22 // 0 /// B0025.1c.1 // ENSEMBL // Caenorhabditis elegans Protein VPS-34 |
isoform c (vps-34) mRNA |
18450806 |
transcript_cluster_id: 18450806 |
chrI |
+ |
6022659 |
6026983 |
24 |
NM_059339 // csn-2 // COP9 signalosome complex subunit 2 // --- // 172278 /// B0025.2.1 // csn-2 // COP9 signalosome complex subunit 2 // --- // 172278 /// B0025.2.2 // csn-2 // COP9 signalosome complex subunit 2 // --- // 172278 |
"NM_059339 // RefSeq // Caenorhabditis elegans COP9 signalosome complex subunit 2 (csn-2) |
partial mRNA. // chrI // 100 // 88 // 21 // 21 // 0 /// B0025.2.1 // ENSEMBL // Caenorhabditis elegans Protein CSN-2 (csn-2) mRNA |
complete cds. [gene_biotype:protein_coding transcript_biotype:protein_coding] // chrI // 100 // 100 // 24 // 24 // 0 /// B0025.2.2 // ENSEMBL // Caenorhabditis elegans Protein CSN-2 (csn-2) mRNA |
complete cds. [gene_biotype:protein_coding transcript_biotype:protein_coding] // chrI // 100 // 100 // 24 // 24 // 0" |
NM_059339 // O01422 |
NM_059339 // Cel.7990 // L1 larva| L4 larva /// B0025.2.1 // Cel.7990 // L1 larva| L4 larva /// B0025.2.2 // Cel.7990 // L1 larva| L4 larva |
NM_059339 // GO:0000003 // reproduction // inferred from electronic annotation /// NM_059339 // GO:0000910 // cytokinesis // inferred from electronic annotation /// NM_059339 // GO:0007275 // multicellular organismal development // inferred from electronic annotation /// NM_059339 // GO:0009792 // embryo development ending in birth or egg hatching // inferred from electronic annotation /// NM_059339 // GO:0018991 // oviposition // inferred from electronic annotation /// NM_059339 // GO:0030154 // cell differentiation // inferred from electronic annotation /// NM_059339 // GO:0048477 // oogenesis // inferred from electronic annotation /// B0025.2.1 // GO:0000003 // reproduction // inferred from electronic annotation /// B0025.2.1 // GO:0000910 // cytokinesis // inferred from electronic annotation /// B0025.2.1 // GO:0007275 // multicellular organismal development // inferred from electronic annotation /// B0025.2.1 // GO:0009792 // embryo development ending in birth or egg hatching // inferred from electronic annotation /// B0025.2.1 // GO:0018991 // oviposition // inferred from electronic annotation /// B0025.2.1 // GO:0030154 // cell differentiation // inferred from electronic annotation /// B0025.2.1 // GO:0048477 // oogenesis // inferred from electronic annotation /// B0025.2.1 // GO:0000003 // reproduction // inferred from mutant phenotype /// B0025.2.1 // GO:0000910 // cytokinesis // inferred from mutant phenotype /// B0025.2.1 // GO:0009792 // embryo development ending in birth or egg hatching // inferred from mutant phenotype /// B0025.2.1 // GO:0018991 // oviposition // inferred from mutant phenotype /// B0025.2.2 // GO:0000003 // reproduction // inferred from electronic annotation /// B0025.2.2 // GO:0000910 // cytokinesis // inferred from electronic annotation /// B0025.2.2 // GO:0007275 // multicellular organismal development // inferred from electronic annotation /// B0025.2.2 // GO:0009792 // embryo development ending in birth or egg hatching // inferred from electronic annotation /// B0025.2.2 // GO:0018991 // oviposition // inferred from electronic annotation /// B0025.2.2 // GO:0030154 // cell differentiation // inferred from electronic annotation /// B0025.2.2 // GO:0048477 // oogenesis // inferred from electronic annotation /// B0025.2.2 // GO:0000003 // reproduction // inferred from mutant phenotype /// B0025.2.2 // GO:0000910 // cytokinesis // inferred from mutant phenotype /// B0025.2.2 // GO:0009792 // embryo development ending in birth or egg hatching // inferred from mutant phenotype /// B0025.2.2 // GO:0018991 // oviposition // inferred from mutant phenotype |
NM_059339 // GO:0005634 // nucleus // inferred from electronic annotation /// NM_059339 // GO:0005737 // cytoplasm // inferred from electronic annotation /// NM_059339 // GO:0008180 // COP9 signalosome // inferred from electronic annotation /// B0025.2.1 // GO:0005634 // nucleus // inferred from electronic annotation /// B0025.2.1 // GO:0005737 // cytoplasm // inferred from electronic annotation /// B0025.2.1 // GO:0008180 // COP9 signalosome // inferred from electronic annotation /// B0025.2.2 // GO:0005634 // nucleus // inferred from electronic annotation /// B0025.2.2 // GO:0005737 // cytoplasm // inferred from electronic annotation /// B0025.2.2 // GO:0008180 // COP9 signalosome // inferred from electronic annotation |
NM_059339 // GO:0005515 // protein binding // inferred from physical interaction /// B0025.2.1 // GO:0005515 // protein binding // inferred from physical interaction /// B0025.2.1 // GO:0005515 // protein binding // inferred from electronic annotation /// B0025.2.2 // GO:0005515 // protein binding // inferred from physical interaction /// B0025.2.2 // GO:0005515 // protein binding // inferred from electronic annotation |
18450814 |
transcript_cluster_id: 18450814 |
chrI |
+ |
6027194 |
6028372 |
25 |
NM_170871 // B0025.4 // hypothetical protein // --- // 172279 /// B0025.4 // B0025.4 // hypothetical protein // --- // 172279 |
"NM_170871 // RefSeq // Caenorhabditis elegans Uncharacterized protein (B0025.4) |
partial mRNA. // chrI // 100 // 64 // 16 // 16 // 0 /// B0025.4 // ENSEMBL // Caenorhabditis elegans Protein B0025.4 (B0025.4) mRNA |
complete cds. [gene_biotype:protein_coding transcript_biotype:protein_coding] // chrI // 100 // 100 // 25 // 25 // 0" |
NM_170871 // Q8WQC3 /// B0025.4 // Q8WQC3 |
NM_170871 // Cel.23228 // embryo /// B0025.4 // Cel.23228 // embryo |
--- |
--- |
--- |
"B0025.4 // Pfam // IPR015418 // Histone H4 acetyltransferase |
18450818 |
transcript_cluster_id: 18450818 |
chrI |
+ |
4664500 |
4665349 |
28 |
NM_059021 // B0041.1 // hypothetical protein // --- // 181822 /// B0041.1 // B0041.1 // hypothetical protein // --- // 181822 |
"NM_059021 // RefSeq // Caenorhabditis elegans Uncharacterized protein (B0041.1) |
partial mRNA. // chrI // 100 // 46 // 13 // 13 // 0 /// B0041.1 // ENSEMBL // Caenorhabditis elegans Protein B0041.1 (B0041.1) mRNA |
complete cds. [gene_biotype:protein_coding transcript_biotype:protein_coding] // chrI // 100 // 100 // 28 // 28 // 0" |
NM_059021 // O02060 /// B0041.1 // O02060 |
NM_059021 // Cel.34608 // --- /// B0041.1 // Cel.34608 // --- |
--- |
--- |
--- |
--- |
18450827 |
transcript_cluster_id: 18450827 |
chrI |
+ |
4653472 |
4659519 |
31 |
NM_001025786 // ain-2 // ALG-1 INteracting protein // --- // 172076 /// NM_001262753 // ain-2 // ALG-1 INteracting protein // --- // 172076 /// NM_059019 // ain-2 // ALG-1 INteracting protein // --- // 172076 /// NM_059020 // ain-2 // ALG-1 INteracting protein // --- // 172076 /// B0041.2a.1 // ain-2 // ALG-1 INteracting protein // --- // 172076 /// B0041.2a.2 // ain-2 // ALG-1 INteracting protein // --- // 172076 /// B0041.2b // ain-2 // ALG-1 INteracting protein // --- // 172076 /// B0041.2c.1 // ain-2 // ALG-1 INteracting protein // --- // 172076 /// B0041.2c.2 // ain-2 // ALG-1 INteracting protein // --- // 172076 /// B0041.2d // ain-2 // ALG-1 INteracting protein // --- // 172076 |
"NM_001025786 // RefSeq // Caenorhabditis elegans ALG-1 INteracting protein (ain-2) |
partial mRNA. // chrI // 100 // 81 // 25 // 25 // 0 /// NM_001262753 // RefSeq // Caenorhabditis elegans ALG-1 INteracting protein (ain-2) |
partial mRNA. // chrI // 100 // 90 // 28 // 28 // 0 /// NM_059019 // RefSeq // Caenorhabditis elegans ALG-1 INteracting protein (ain-2) |
partial mRNA. // chrI // 100 // 81 // 25 // 25 // 0 /// NM_059020 // RefSeq // Caenorhabditis elegans ALG-1 INteracting protein (ain-2) |
partial mRNA. // chrI // 100 // 74 // 23 // 23 // 0 /// B0041.2a.1 // ENSEMBL // Caenorhabditis elegans Protein AIN-2 |
isoform d. [gene_biotype:protein_coding transcript_biotype:protein_coding] // chrI // 100 // 90 // 28 // 28 // 0 /// B0041.2a.2 // ENSEMBL // Caenorhabditis elegans Protein AIN-2 |
isoform d. [gene_biotype:protein_coding transcript_biotype:protein_coding] // chrI // 100 // 100 // 31 // 31 // 0 /// B0041.2b // ENSEMBL // Caenorhabditis elegans Protein AIN-2 |
isoform d. [gene_biotype:protein_coding transcript_biotype:protein_coding] // chrI // 100 // 94 // 29 // 29 // 0 /// B0041.2c.1 // ENSEMBL // Caenorhabditis elegans Protein AIN-2 |
isoform d. [gene_biotype:protein_coding transcript_biotype:protein_coding] // chrI // 100 // 90 // 28 // 28 // 0 /// B0041.2c.2 // ENSEMBL // Caenorhabditis elegans Protein AIN-2 |
18450840 |
transcript_cluster_id: 18450840 |
chrI |
+ |
4644438 |
4645627 |
25 |
NM_059014 // lmd-2 // LysM Domain (peptidoglycan binding) protein // --- // 172073 /// B0041.3 // lmd-2 // LysM Domain (peptidoglycan binding) protein // --- // 172073 |
"NM_059014 // RefSeq // Caenorhabditis elegans LysM Domain (peptidoglycan binding) protein (lmd-2) |
partial mRNA. // chrI // 100 // 76 // 19 // 19 // 0 /// B0041.3 // ENSEMBL // Caenorhabditis elegans Protein B0041.3 (B0041.3) mRNA |
complete cds. [gene_biotype:protein_coding transcript_biotype:protein_coding] // chrI // 100 // 100 // 25 // 25 // 0" |
NM_059014 // O02055 /// B0041.3 // O02055 |
NM_059014 // Cel.19320 // --- /// B0041.3 // Cel.19320 // --- |
NM_059014 // GO:0019915 // lipid storage // inferred from electronic annotation /// B0041.3 // GO:0019915 // lipid storage // inferred from electronic annotation /// B0041.3 // GO:0019915 // lipid storage // inferred from mutant phenotype |
--- |
--- |
B0041.3 // Pfam // IPR018392 // LysM domain |
18450845 |
transcript_cluster_id: 18450845 |
chrI |
+ |
4647319 |
4648279 |
25 |
NM_059016 // B0041.8 // hypothetical protein // --- // 259374 /// B0041.8.1 // B0041.8 // hypothetical protein // --- // 259374 /// B0041.8.2 // B0041.8 // hypothetical protein // --- // 259374 |
"NM_059016 // RefSeq // Caenorhabditis elegans Uncharacterized protein (B0041.8) |
partial mRNA. // chrI // 100 // 60 // 15 // 15 // 0 /// B0041.8.1 // ENSEMBL // Caenorhabditis elegans Protein B0041.8 (B0041.8) mRNA |
complete cds. [gene_biotype:protein_coding transcript_biotype:protein_coding] // chrI // 100 // 80 // 20 // 20 // 0 /// B0041.8.2 // ENSEMBL // Caenorhabditis elegans Protein B0041.8 (B0041.8) mRNA |
complete cds. [gene_biotype:protein_coding transcript_biotype:protein_coding] // chrI // 100 // 100 // 25 // 25 // 0" |
NM_059016 // Q95R19 /// B0041.8.1 // Q95R19 /// B0041.8.2 // Q95R19 |
NM_059016 // Cel.19317 // L1 larva /// B0041.8.1 // Cel.19317 // L1 larva /// B0041.8.2 // Cel.19317 // L1 larva |
NM_059016 // GO:0007411 // axon guidance // inferred from electronic annotation /// NM_059016 // GO:0007413 // axonal fasciculation // inferred from electronic annotation /// NM_059016 // GO:0019915 // lipid storage // inferred from electronic annotation /// B0041.8.1 // GO:0007411 // axon guidance // inferred from electronic annotation /// B0041.8.1 // GO:0007413 // axonal fasciculation // inferred from electronic annotation /// B0041.8.1 // GO:0019915 // lipid storage // inferred from electronic annotation /// B0041.8.1 // GO:0007411 // axon guidance // inferred from mutant phenotype /// B0041.8.1 // GO:0007413 // axonal fasciculation // inferred from mutant phenotype /// B0041.8.1 // GO:0019915 // lipid storage // inferred from mutant phenotype /// B0041.8.2 // GO:0007411 // axon guidance // inferred from electronic annotation /// B0041.8.2 // GO:0007413 // axonal fasciculation // inferred from electronic annotation /// B0041.8.2 // GO:0019915 // lipid storage // inferred from electronic annotation /// B0041.8.2 // GO:0007411 // axon guidance // inferred from mutant phenotype /// B0041.8.2 // GO:0007413 // axonal fasciculation // inferred from mutant phenotype /// B0041.8.2 // GO:0019915 // lipid storage // inferred from mutant phenotype |
--- |
--- |
18450851 |
transcript_cluster_id: 18450851 |
chrI |
+ |
10708352 |
10710364 |
25 |
NM_060403 // B0205.10 // hypothetical protein // --- // 172973 /// B0205.10.1 // B0205.10 // hypothetical protein // --- // 172973 /// B0205.10.2 // B0205.10 // hypothetical protein // --- // 172973 |
"NM_060403 // RefSeq // Caenorhabditis elegans Uncharacterized protein (B0205.10) |
partial mRNA. // chrI // 100 // 56 // 14 // 14 // 0 /// B0205.10.1 // ENSEMBL // Caenorhabditis elegans Protein B0205.10 (B0205.10) mRNA |
complete cds. [gene_biotype:protein_coding transcript_biotype:protein_coding] // chrI // 100 // 84 // 21 // 21 // 0 /// B0205.10.2 // ENSEMBL // Caenorhabditis elegans Protein B0205.10 (B0205.10) mRNA |
complete cds. [gene_biotype:protein_coding transcript_biotype:protein_coding] // chrI // 100 // 100 // 25 // 25 // 0" |
NM_060403 // O61747 /// B0205.10.1 // O61747 /// B0205.10.2 // O61747 |
NM_060403 // Cel.19311 // L4 larva /// B0205.10.1 // Cel.19311 // L4 larva /// B0205.10.2 // Cel.19311 // L4 larva |
NM_060403 // GO:0008340 // determination of adult lifespan // inferred from electronic annotation /// B0205.10.1 // GO:0008340 // determination of adult lifespan // inferred from electronic annotation /// B0205.10.2 // GO:0008340 // determination of adult lifespan // inferred from electronic annotation |
--- |
--- |
18450859 |
transcript_cluster_id: 18450859 |
chrI |
+ |
10730456 |
10730701 |
22 |
NM_001025788 // B0205.12 // hypothetical protein // --- // 3565131 /// B0205.12 // B0205.12 // hypothetical protein // --- // 3565131 |
"NM_001025788 // RefSeq // Caenorhabditis elegans Uncharacterized protein (B0205.12) |
partial mRNA. // chrI // 100 // 86 // 19 // 19 // 0 /// B0205.12 // ENSEMBL // Caenorhabditis elegans Protein B0205.12 (B0205.12) mRNA |
complete cds. [gene_biotype:protein_coding transcript_biotype:protein_coding] // chrI // 100 // 100 // 22 // 22 // 0" |
NM_001025788 // Q4W4Z5 /// B0205.12 // Q4W4Z5 |
NM_001025788 // Cel.29744 // --- /// B0205.12 // Cel.29744 // --- |
--- |
--- |
--- |
B0205.12 // Pfam // IPR027854 // Protein of unknown function DUF4535 |
18450863 |
transcript_cluster_id: 18450863 |
chrI |
+ |
10726907 |
10727340 |
24 |
NM_001047166 // B0205.14 // hypothetical protein // --- // 4363000 /// B0205.14 // B0205.14 // hypothetical protein // --- // 4363000 |
"NM_001047166 // RefSeq // Caenorhabditis elegans Uncharacterized protein (B0205.14) |
partial mRNA. // chrI // 100 // 100 // 24 // 24 // 0 /// B0205.14 // ENSEMBL // Caenorhabditis elegans Protein B0205.14 (B0205.14) mRNA |
complete cds. [gene_biotype:protein_coding transcript_biotype:protein_coding] // chrI // 100 // 100 // 24 // 24 // 0" |
NM_001047166 // Q336L2 /// B0205.14 // Q336L2 |
NM_001047166 // Cel.33939 // --- /// B0205.14 // Cel.33939 // --- |
--- |
--- |
--- |
--- |
18450866 |
transcript_cluster_id: 18450866 |
chrI |
+ |
10740207 |
10740579 |
22 |
NM_060412 // B0205.5 // hypothetical protein // --- // 181832 /// B0205.5 // B0205.5 // hypothetical protein // --- // 181832 |
"NM_060412 // RefSeq // Caenorhabditis elegans Uncharacterized protein (B0205.5) |
partial mRNA. // chrI // 100 // 68 // 15 // 15 // 0 /// B0205.5 // ENSEMBL // Caenorhabditis elegans Protein B0205.5 (B0205.5) mRNA |
complete cds. [gene_biotype:protein_coding transcript_biotype:protein_coding] // chrI // 100 // 100 // 22 // 22 // 0" |
NM_060412 // O61740 /// B0205.5 // O61740 |
NM_060412 // Cel.37012 // --- /// B0205.5 // Cel.37012 // --- |
--- |
--- |
--- |
--- |
18450870 |
transcript_cluster_id: 18450870 |
chrI |
+ |
10736686 |
10739900 |
30 |
NM_060411 // B0205.6 // hypothetical protein // --- // 172979 /// B0205.6 // B0205.6 // hypothetical protein // --- // 172979 |
"NM_060411 // RefSeq // Caenorhabditis elegans Uncharacterized protein (B0205.6) |
partial mRNA. // chrI // 100 // 90 // 27 // 27 // 0 /// B0205.6 // ENSEMBL // Caenorhabditis elegans Protein B0205.6 (B0205.6) mRNA |
complete cds. [gene_biotype:protein_coding transcript_biotype:protein_coding] // chrI // 100 // 100 // 30 // 30 // 0" |
NM_060411 // O61741 /// B0205.6 // O61741 |
NM_060411 // Cel.17271 // embryo| L1 larva| L4 larva /// B0205.6 // Cel.17271 // embryo| L1 larva| L4 larva |
NM_060411 // GO:0000003 // reproduction // inferred from electronic annotation /// NM_060411 // GO:0002119 // nematode larval development // inferred from electronic annotation /// NM_060411 // GO:0006534 // cysteine metabolic process // inferred from electronic annotation /// NM_060411 // GO:0008152 // metabolic process // inferred from electronic annotation /// NM_060411 // GO:0009792 // embryo development ending in birth or egg hatching // inferred from electronic annotation /// NM_060411 // GO:0044571 // [2Fe-2S] cluster assembly // inferred from electronic annotation /// B0205.6 // GO:0000003 // reproduction // inferred from electronic annotation /// B0205.6 // GO:0002119 // nematode larval development // inferred from electronic annotation /// B0205.6 // GO:0006534 // cysteine metabolic process // inferred from electronic annotation /// B0205.6 // GO:0008152 // metabolic process // inferred from electronic annotation /// B0205.6 // GO:0009792 // embryo development ending in birth or egg hatching // inferred from electronic annotation /// B0205.6 // GO:0000003 // reproduction // inferred from mutant phenotype /// B0205.6 // GO:0002119 // nematode larval development // inferred from mutant phenotype /// B0205.6 // GO:0009792 // embryo development ending in birth or egg hatching // inferred from mutant phenotype /// B0205.6 // GO:0044571 // [2Fe-2S] cluster assembly // inferred from electronic annotation |
--- |
NM_060411 // GO:0003824 // catalytic activity // inferred from electronic annotation /// NM_060411 // GO:0030170 // pyridoxal phosphate binding // inferred from electronic annotation /// NM_060411 // GO:0031071 // cysteine desulfurase activity // inferred from electronic annotation /// B0205.6 // GO:0003824 // catalytic activity // inferred from electronic annotation /// B0205.6 // GO:0030170 // pyridoxal phosphate binding // inferred from electronic annotation /// B0205.6 // GO:0031071 // cysteine desulfurase activity // inferred from electronic annotation |
B0205.6 // Pfam // IPR000192 // Aminotransferase class V domain |
18450883 |
transcript_cluster_id: 18450883 |
chrI |
+ |
10734011 |
10736596 |
27 |
NM_060410 // kin-3 // Casein kinase II subunit alpha // --- // 172978 /// B0205.7 // kin-3 // Casein kinase II subunit alpha // --- // 172978 |
"NM_060410 // RefSeq // Caenorhabditis elegans Casein kinase II subunit alpha (kin-3) |
partial mRNA. // chrI // 100 // 89 // 24 // 24 // 0 /// B0205.7 // ENSEMBL // Caenorhabditis elegans Protein KIN-3 (kin-3) mRNA |
complete cds. [gene_biotype:protein_coding transcript_biotype:protein_coding] // chrI // 100 // 100 // 27 // 27 // 0" |
NM_060410 // P18334 |
NM_060410 // Cel.17822 // embryo| L1 larva| L4 larva /// B0205.7 // Cel.17822 // embryo| L1 larva| L4 larva |
NM_060410 // GO:0000003 // reproduction // inferred from electronic annotation /// NM_060410 // GO:0006468 // protein phosphorylation // inferred from direct assay /// NM_060410 // GO:0006468 // protein phosphorylation // inferred from electronic annotation /// NM_060410 // GO:0007610 // behavior // inferred from electronic annotation /// NM_060410 // GO:0009792 // embryo development ending in birth or egg hatching // inferred from electronic annotation /// NM_060410 // GO:0016055 // Wnt signaling pathway // inferred from electronic annotation /// NM_060410 // GO:0016310 // phosphorylation // inferred from electronic annotation /// NM_060410 // GO:0034606 // response to hermaphrodite contact // inferred from mutant phenotype /// NM_060410 // GO:0034608 // vulval location // inferred from mutant phenotype /// B0205.7 // GO:0000003 // reproduction // inferred from electronic annotation /// B0205.7 // GO:0006468 // protein phosphorylation // inferred from direct assay /// B0205.7 // GO:0006468 // protein phosphorylation // inferred from electronic annotation /// B0205.7 // GO:0007610 // behavior // inferred from electronic annotation /// B0205.7 // GO:0009792 // embryo development ending in birth or egg hatching // inferred from electronic annotation /// B0205.7 // GO:0016055 // Wnt signaling pathway // inferred from electronic annotation /// B0205.7 // GO:0016310 // phosphorylation // inferred from electronic annotation /// B0205.7 // GO:0034606 // response to hermaphrodite contact // inferred from mutant phenotype /// B0205.7 // GO:0034608 // vulval location // inferred from mutant phenotype /// B0205.7 // GO:0000003 // reproduction // inferred from mutant phenotype /// B0205.7 // GO:0009792 // embryo development ending in birth or egg hatching // inferred from mutant phenotype /// B0205.7 // GO:0040035 // hermaphrodite genitalia development // inferred from mutant phenotype |
NM_060410 // GO:0005634 // nucleus // inferred from direct assay /// NM_060410 // GO:0005929 // cilium // inferred from direct assay /// NM_060410 // GO:0005929 // cilium // inferred from electronic annotation /// NM_060410 // GO:0030424 // axon // inferred from direct assay /// NM_060410 // GO:0030424 // axon // inferred from electronic annotation /// NM_060410 // GO:0030425 // dendrite // inferred from direct assay /// NM_060410 // GO:0030425 // dendrite // inferred from electronic annotation /// NM_060410 // GO:0031513 // nonmotile primary cilium // inferred from direct assay /// NM_060410 // GO:0042995 // cell projection // inferred from electronic annotation /// NM_060410 // GO:0043025 // neuronal cell body // inferred from direct assay /// NM_060410 // GO:0043204 // perikaryon // inferred from electronic annotation /// B0205.7 // GO:0005634 // nucleus // inferred from direct assay /// B0205.7 // GO:0005929 // cilium // inferred from direct assay /// B0205.7 // GO:0005929 // cilium // inferred from electronic annotation /// B0205.7 // GO:0030424 // axon // inferred from direct assay /// B0205.7 // GO:0030424 // axon // inferred from electronic annotation /// B0205.7 // GO:0030425 // dendrite // inferred from direct assay /// B0205.7 // GO:0030425 // dendrite // inferred from electronic annotation /// B0205.7 // GO:0031513 // nonmotile primary cilium // inferred from direct assay /// B0205.7 // GO:0042995 // cell projection // inferred from electronic annotation /// B0205.7 // GO:0043025 // neuronal cell body // inferred from direct assay /// B0205.7 // GO:0043204 // perikaryon // inferred from electronic annotation |
"NM_060410 // GO:0000166 // nucleotide binding // inferred from electronic annotation /// NM_060410 // GO:0004672 // protein kinase activity // inferred from direct assay /// NM_060410 // GO:0004672 // protein kinase activity // inferred from electronic annotation /// NM_060410 // GO:0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// NM_060410 // GO:0005515 // protein binding // inferred from physical interaction /// NM_060410 // GO:0005524 // ATP binding // inferred from electronic annotation /// NM_060410 // GO:0016301 // kinase activity // inferred from electronic annotation /// NM_060410 // GO:0016740 // transferase activity // inferred from electronic annotation /// NM_060410 // GO:0016772 // transferase activity |
transferring phosphorus-containing groups // inferred from electronic annotation /// B0205.7 // GO:0000166 // nucleotide binding // inferred from electronic annotation /// B0205.7 // GO:0004672 // protein kinase activity // inferred from direct assay /// B0205.7 // GO:0004672 // protein kinase activity // inferred from electronic annotation /// B0205.7 // GO:0004674 // protein serine/threonine kinase activity // inferred from electronic annotation /// B0205.7 // GO:0005515 // protein binding // inferred from physical interaction /// B0205.7 // GO:0005524 // ATP binding // inferred from electronic annotation /// B0205.7 // GO:0016301 // kinase activity // inferred from electronic annotation /// B0205.7 // GO:0016740 // transferase activity // inferred from electronic annotation /// B0205.7 // GO:0016772 // transferase activity |
18450893 |
transcript_cluster_id: 18450893 |
chrI |
+ |
10720815 |
10723580 |
21 |
NM_060405 // B0205.9 // hypothetical protein // --- // 172975 /// B0205.9 // B0205.9 // hypothetical protein // --- // 172975 |
"NM_060405 // RefSeq // Caenorhabditis elegans Uncharacterized protein (B0205.9) |
partial mRNA. // chrI // 100 // 86 // 18 // 18 // 0 /// B0205.9 // ENSEMBL // Caenorhabditis elegans Protein B0205.9 (B0205.9) mRNA |
complete cds. [gene_biotype:protein_coding transcript_biotype:protein_coding] // chrI // 100 // 100 // 21 // 21 // 0" |
NM_060405 // O61745 /// B0205.9 // O61745 |
NM_060405 // Cel.5711 // embryo| L1 larva /// B0205.9 // Cel.5711 // embryo| L1 larva |
NM_060405 // GO:0009792 // embryo development ending in birth or egg hatching // inferred from electronic annotation /// B0205.9 // GO:0009792 // embryo development ending in birth or egg hatching // inferred from electronic annotation /// B0205.9 // GO:0009792 // embryo development ending in birth or egg hatching // inferred from mutant phenotype |
--- |
--- |
B0205.9 // Pfam // IPR006570 // SPK domain /// B0205.9 // Pfam // IPR006570 // SPK domain |
18450902 |
transcript_cluster_id: 18450902 |
chrI |
+ |
5965064 |
5967213 |
25 |
NM_059321 // B0207.1 // Protein-tyrosine-phosphatase // --- // 181834 /// B0207.1 // B0207.1 // Protein-tyrosine-phosphatase // --- // 181834 |
"NM_059321 // RefSeq // Caenorhabditis elegans Protein-tyrosine-phosphatase (B0207.1) |
partial mRNA. // chrI // 100 // 100 // 25 // 25 // 0 /// B0207.1 // ENSEMBL // Caenorhabditis elegans Protein B0207.1 (B0207.1) mRNA |
complete cds. [gene_biotype:protein_coding transcript_biotype:protein_coding] // chrI // 100 // 100 // 25 // 25 // 0" |
NM_059321 // O01435 /// B0207.1 // O01435 |
NM_059321 // Cel.37011 // --- /// B0207.1 // Cel.37011 // --- |
NM_059321 // GO:0006470 // protein dephosphorylation // inferred from electronic annotation /// NM_059321 // GO:0035335 // peptidyl-tyrosine dephosphorylation // inferred from electronic annotation /// NM_059321 // GO:0016311 // dephosphorylation // inferred from electronic annotation /// B0207.1 // GO:0006470 // protein dephosphorylation // inferred from electronic annotation /// B0207.1 // GO:0035335 // peptidyl-tyrosine dephosphorylation // inferred from electronic annotation /// B0207.1 // GO:0016311 // dephosphorylation // inferred from electronic annotation |
--- |
NM_059321 // GO:0004721 // phosphoprotein phosphatase activity // inferred from electronic annotation /// NM_059321 // GO:0004725 // protein tyrosine phosphatase activity // inferred from electronic annotation /// NM_059321 // GO:0016787 // hydrolase activity // inferred from electronic annotation /// NM_059321 // GO:0016791 // phosphatase activity // inferred from electronic annotation /// B0207.1 // GO:0004721 // phosphoprotein phosphatase activity // inferred from electronic annotation /// B0207.1 // GO:0004725 // protein tyrosine phosphatase activity // inferred from electronic annotation /// B0207.1 // GO:0016787 // hydrolase activity // inferred from electronic annotation /// B0207.1 // GO:0016791 // phosphatase activity // inferred from electronic annotation |
B0207.1 // Pfam // IPR000242 // PTP type protein phosphatase |
18450911 |
transcript_cluster_id: 18450911 |
chrI |
+ |
5968743 |
5968965 |
22 |
NR_050154 // B0207.13 // ncRNA // --- // 13180412 |
"NR_050154 // RefSeq // Caenorhabditis elegans Unclassified non-coding RNA B0207.13 (B0207.13) |
ncRNA. // chrI // 100 // 100 // 22 // 22 // 0 /// B0207.13 // ENSEMBL // cdna:known chromosome:WBcel235:I:5968741:5968963:1 gene:WBGene00195755 transcript:B0207.13 // chrI // 100 // 100 // 22 // 22 // 0 /// NONCELT000388 // NONCODE // Non-coding transcript identified by NONCODE: Antisense |
Sense No Exonic // chrI // 100 // 100 // 22 // 22 // 0" |
--- |
--- |
--- |
--- |
--- |
--- |
18450913 |
transcript_cluster_id: 18450913 |
chrI |
+ |
5969292 |
5969356 |
25 |
NR_050155 // B0207.15 // ncRNA // --- // 13180413 |
"NR_050155 // RefSeq // Caenorhabditis elegans Unclassified non-coding RNA B0207.15 (B0207.15) |
ncRNA. // chrI // 100 // 100 // 25 // 25 // 0 /// B0207.15 // ENSEMBL // cdna:known chromosome:WBcel235:I:5969290:5969354:1 gene:WBGene00198238 transcript:B0207.15 // chrI // 100 // 100 // 25 // 25 // 0 /// NONCELT000389 // NONCODE // Non-coding transcript identified by NONCODE // chrI // 100 // 100 // 25 // 25 // 0" |
--- |
--- |
--- |
--- |
--- |
--- |
1 |
18450915 |
transcript_cluster_id: 18450915 |
chrI |
+ |
5955032 |
5956885 |
24 |
NM_059317 // B0207.2 // hypothetical protein // --- // 181835 /// B0207.2 // B0207.2 // hypothetical protein // --- // 181835 |
"NM_059317 // RefSeq // Caenorhabditis elegans Uncharacterized protein (B0207.2) |
partial mRNA. // chrI // 100 // 79 // 19 // 19 // 0 /// B0207.2 // ENSEMBL // Caenorhabditis elegans Protein B0207.2 (B0207.2) mRNA |
complete cds. [gene_biotype:protein_coding transcript_biotype:protein_coding] // chrI // 100 // 100 // 24 // 24 // 0" |
NM_059317 // O01431 /// B0207.2 // O01431 |
NM_059317 // Cel.20360 // L1 larva /// B0207.2 // Cel.20360 // L1 larva |
--- |
NM_059317 // GO:0016020 // membrane // inferred from electronic annotation /// NM_059317 // GO:0016021 // integral component of membrane // inferred from electronic annotation /// B0207.2 // GO:0016020 // membrane // inferred from electronic annotation /// B0207.2 // GO:0016021 // integral component of membrane // inferred from electronic annotation |
--- |
--- |
18450924 |
transcript_cluster_id: 18450924 |
chrI |
+ |
5942421 |
5945539 |
18 |
NM_001025794 // gpa-14 // Guanine nucleotide-binding protein alpha-14 subunit // --- // 172269 /// NM_001025795 // gpa-14 // Guanine nucleotide-binding protein alpha-14 subunit // --- // 172269 /// B0207.3a // gpa-14 // Guanine nucleotide-binding protein alpha-14 subunit // --- // 172269 /// B0207.3b // gpa-14 // Guanine nucleotide-binding protein alpha-14 subunit // --- // 172269 /// AY008136 // gpa-14 // Guanine nucleotide-binding protein alpha-14 subunit // --- // 172269 |
"NM_001025794 // RefSeq // Caenorhabditis elegans Guanine nucleotide-binding protein alpha-14 subunit (gpa-14) |
partial mRNA. // chrI // 100 // 94 // 17 // 17 // 0 /// NM_001025795 // RefSeq // Caenorhabditis elegans Guanine nucleotide-binding protein alpha-14 subunit (gpa-14) |
partial mRNA. // chrI // 100 // 100 // 18 // 18 // 0 /// B0207.3a // ENSEMBL // Caenorhabditis elegans Protein GPA-14 |
isoform a (gpa-14) mRNA |
complete cds. [gene_biotype:protein_coding transcript_biotype:protein_coding] // chrI // 100 // 94 // 17 // 17 // 0 /// B0207.3b // ENSEMBL // Caenorhabditis elegans Protein GPA-14 |
isoform a (gpa-14) mRNA |
complete cds. [gene_biotype:protein_coding transcript_biotype:protein_coding] // chrI // 100 // 100 // 18 // 18 // 0 /// AY008136 // GenBank // Caenorhabditis elegans isolate GPA-14 heterotrimeric G protein alpha subunit mRNA |
complete cds. // chrI // 100 // 94 // 17 // 17 // 0" |
NM_001025794 // Q9BIG2 /// NM_001025795 // Q9BIG2 /// B0207.3a // Q9BIG2 /// B0207.3b // Q9BIG2 /// AY008136 // Q9BIG2 |