GEO help: Mouse over screen elements for information.
Status
Public on Aug 17, 2006
Title
Agilent-014706 Human Promoter ChIP-on-Chip Set 244K, Microarray 1 of 2 G4489A (Feature Number version)
Technology type
in situ oligonucleotide
Distribution
custom-commercial
Organism
Homo sapiens Manufacturer
Agilent Technologies
Manufacture protocol
see manufacturer's web site at http://www.agilent.com/
Catalog number
G4489A
Description
Submission date
Aug 17, 2006
Last update date
Dec 06, 2012
Organization
Agilent Technologies
E-mail(s)
cag_sales-na@agilent.com Phone
877-424-4536
URL
http://www.agilent.com Department
Street address
City
Palo Alto
State/province
CA
ZIP/Postal code
94304
Country
USA
Samples (130)
GSM180122 , GSM180124 , GSM180315 , GSM180317 , GSM180320 , GSM180322
GSM180325 ,
GSM180338 ,
GSM180340 ,
GSM180343 ,
GSM238443 ,
GSM238445 ,
GSM238447 ,
GSM238449 ,
GSM281579 ,
GSM281589 ,
GSM281698 ,
GSM281700 ,
GSM283906 ,
GSM283907 ,
GSM283908 ,
GSM283909 ,
GSM283910 ,
GSM346071 ,
GSM346072 ,
GSM346073 ,
GSM346074 ,
GSM346075 ,
GSM346076 ,
GSM346077 ,
GSM346078 ,
GSM346079 ,
GSM346080 ,
GSM346081 ,
GSM346082 ,
GSM346083 ,
GSM346084 ,
GSM346085 ,
GSM346086 ,
GSM346087 ,
GSM346088 ,
GSM346089 ,
GSM346090 ,
GSM374796 ,
GSM374797 ,
GSM374798 ,
GSM374799 ,
GSM374800 ,
GSM374801 ,
GSM374802 ,
GSM374803 ,
GSM374804 ,
GSM374805 ,
GSM374806 ,
GSM374807 ,
GSM375847 ,
GSM375853 ,
GSM402831 ,
GSM402833 ,
GSM402835 ,
GSM402837 ,
GSM402839 ,
GSM402841 ,
GSM402843 ,
GSM402845 ,
GSM402847 ,
GSM402849 ,
GSM402851 ,
GSM402853 ,
GSM402855 ,
GSM402857 ,
GSM402859 ,
GSM402861 ,
GSM402863 ,
GSM402865 ,
GSM442662 ,
GSM442664 ,
GSM442666 ,
GSM442668 ,
GSM468268 ,
GSM468269 ,
GSM570353 ,
GSM570355 ,
GSM570357 ,
GSM570359 ,
GSM585183 ,
GSM585184 ,
GSM634467 ,
GSM634468 ,
GSM635412 ,
GSM635414 ,
GSM639393 ,
GSM639394 ,
GSM639397 ,
GSM639398 ,
GSM661301 ,
GSM661303 ,
GSM661305 ,
GSM661307 ,
GSM661309 ,
GSM661311 ,
GSM661313 ,
GSM661315 ,
GSM661317 ,
GSM661319 ,
GSM661321 ,
GSM661323 ,
GSM661325 ,
GSM661327 ,
GSM661329 ,
GSM661331 ,
GSM661333 ,
GSM661335 ,
GSM661337 ,
GSM661339 ,
GSM661341 ,
GSM661343 ,
GSM661345 ,
GSM661347 ,
GSM934071 ,
GSM934072 ,
GSM934075 ,
GSM934076 ,
GSM969963 ,
GSM996301 ,
GSM996302 ,
GSM996303 ,
GSM996304 ,
GSM996305 ,
GSM1055160 Series (25)
GSE7449 Genome-wide analysis reveals determinants of redundant and specific binding within a transcription factor family
GSE9367 IRF4 ChIP-on-chip for Myeloma Cell Lines
GSE11173 Defining a Chromatin Pattern That Characterizes DNA Hypermethylated Genes in Colon Cancer Cells
GSE11245 Genome-Wide profile of c-Myc binding in HL60 cells
GSE13749 Genome-wide characterization of the transcriptional program of Myc-dependent transformation, ChIP-chip
GSE14264 Genome-wide characterization of the transcriptional program of Myc-dependent transformation
GSE15002 Identification of Myc target genes in xenograft tissue derived from human lung cancers
GSE15052 NPAS2 ChIP-on-chip in MCF7 cells
GSE15594 Distinctive Chromatin in Human Sperm Packages Genes that Guide Embryo Development
GSE15701 Distinctive Chromatin in Human Sperm Packages Genes that Guide Embryo Development: ChIP-chip
GSE17733 Delineation of EZH2 oncogenic functions in hepatocellular carcinoma
GSE18892 Silencing of AEBP1 in U87MG glial cells and Chip-chIP with AEBP1 antibody
GSE23170 ChIP-on-chip experiment from Ramos cells to analyze genome-wide CRTC2 binding sites in germinal center B cells
GSE23171 CRTC2 couples genotoxic stress and plasma cell differentiation in the germinal center
GSE23709 Poly(ADP-ribose) polymerase 3: a key regulator of ectodermal specification and neural crest development.
GSE25824 CpG Methylation profile of Invasive Prostate Cancer Cells compared to Non-invasive
GSE25884 Delineation of AR oncogenic functions in hepatocellular carcinoma
GSE26035 Chromatin-associated protein kinase C-0 regulates an inducible gene expression program and microRNAs in human T lymphocytes
GSE26861 Genomic Binding of Human Linker Histone H1.5 during differentiation (ChIP-chip)
GSE26979 Human Linker Histone H1.5
GSE38076 CpG Methylation profile of Invasive Pancreatic Cancer Cells compared to Non-invasive
GSE39490 Helicobacter pylori-mediated Epigenetic Dysregulation of FOXD3 Tumor-suppressive Cascade In Gastric Carcinogenesis [ChIP]
GSE39600 Helicobacter pylori-mediated Epigenetic Dysregulation of FOXD3 Tumor-suppressive Cascade In Gastric Carcinogenesis
GSE40554 Identifying chromatin associations with promyelocytic leukemia nuclear bodies using immunoTRAP
GSE43018 Identification of GATA1 transcriptional regulation in the megakaryoblastic cell line Meg01
Relations Alternative to
GPL8169
Data table header descriptions ID Agilent feature number
COL Column
ROW Row
SPOT_ID Spot identifier
CONTROL_TYPE Control type
GB_ACC GenBankAccession
GENE_SYMBOL Gene Symbol
GENE_NAME Gene Name
ACCESSION_STRING Accession String
CHROMOSOMAL_LOCATION Chromosomal Location
CYTOBAND Cytoband
DESCRIPTION Description
GB_RANGE NCBI Build 35.1 Accession.Version[start..end]
Data table ID COL ROW SPOT_ID CONTROL_TYPE GB_ACC GENE_SYMBOL GENE_NAME ACCESSION_STRING CHROMOSOMAL_LOCATION CYTOBAND DESCRIPTION GB_RANGE 1
267
912
HsCGHBrightCorner
pos
2
267
910
DarkCorner
pos
3
267
908
DarkCorner
pos
4
267
906
A_17_P03529681
FALSE
NM_004564 PET112L
ref|NM_004564|ref|PET112L:2131|ens|ENST00000263985:2144
chr4:153037594-153037647
INSIDE
NC_000004.9[153037594..153037647]
5
267
904
A_17_P01064881
FALSE
NM_007266 XAB1
ref|NM_007266|ref|XAB1:2255|mgc|BC007451:2239
chr2:027765781-027765836
INSIDE
NC_000002.9[027765781..027765836]
6
267
902
A_17_P07003827
FALSE
mgc|BC034752:79
chr9:135461096-135461140
Unknown
NC_000009.9[135461096..135461140]
7
267
900
A_17_P00143608
FALSE
NM_024700 SNIP1
ref|NM_024700|ref|SNIP1:172|mgc|BC027040:172
chr1:037688802-037688846
INSIDE
NC_000001.8[037688802..037688846]
8
267
898
A_17_P05837998
FALSE
NM_004445 EPHB6
ref|NM_004445|ref|EPHB6:10252|mgc|BC110606:2527
chr7:142079855-142079905
INSIDE
NC_000007.11[142079855..142079905]
9
267
896
A_17_P00011407
FALSE
NM_005427 TP73
ref|NM_005427|ref|TP73:26612|ens|ENST00000346387:-3189|ens|ENST00000160698:26612
chr1:003618875-003618919
INSIDE
NC_000001.8[003618875..003618919]
10
267
894
A_17_P15187012
FALSE
NM_020247 CABC1
ref|NM_020247|ref|CABC1:332|mgc|BC005171:332
chr1:223435033-223435077
INSIDE
NC_000001.8[223435033..223435077]
11
267
892
A_17_P07126947
FALSE
NM_153714 C10orf67
ref|NM_153714|ref|C10orf67:-2764|mgc|BC035732:-2764
chr10:023676513-023676572
PROMOTER
NC_000010.8[023676513..023676572]
12
267
890
A_17_P05008762
FALSE
NM_153036 C6orf78
ref|NM_153036|ref|C6orf78:26878|ens|ENST00000343644:-1867|mgc|BC057769:26912
chr6:116983784-116983843
INSIDE
NC_000006.9[116983784..116983843]
13
267
888
A_17_P00879288
FALSE
NM_001005736 LYST
ref|NM_001005736|ref|LYST:-2248|ens|ENST00000359334:-2272
chr1:232375200-232375259
PROMOTER
NC_000001.8[232375200..232375259]
14
267
886
A_17_P04456174
FALSE
NM_017785 FLJ20364
ref|NM_017785|ref|FLJ20364:-2017|mgc|BC012568:-2017
chr5:168941308-168941367
PROMOTER
NC_000005.8[168941308..168941367]
15
267
884
A_17_P00689043
FALSE
NM_002927 RGS13
ref|NM_002927|ref|RGS13:-115|ref|NM_144766:-115
chr1:189336794-189336853
PROMOTER
NC_000001.8[189336794..189336853]
16
267
882
A_17_P00748918
FALSE
NM_022731 NUCKS1
ref|NM_022731|ref|NUCKS1:2591|mgc|BC000805:2591
chr1:202448330-202448389
INSIDE
NC_000001.8[202448330..202448389]
17
267
880
A_17_P04285063
FALSE
NM_003687 PDLIM4
ref|NM_003687|ref|PDLIM4:-4930|mgc|BC003096:-4943
chr5:131616332-131616378
PROMOTER
NC_000005.8[131616332..131616378]
18
267
878
A_17_P05078052
FALSE
NM_004842 AKAP7
ref|NM_004842|ref|AKAP7:-987|ref|NM_138633:-987|ref|NM_016377:104056
chr6:131612180-131612239
PROMOTER
NC_000006.9[131612180..131612239]
19
267
876
A_17_P04680536
FALSE
NM_138928 MOCS1
ref|NM_138928|ref|MOCS1:-197|ref|NM_005943:-197|mgc|BC036839:4519|ens|ENST00000340692:6521
chr6:040003607-040003654
PROMOTER
NC_000006.9[040003607..040003654]
20
267
874
A_17_P16025454
FALSE
NM_001001656 OR9A4
ref|NM_001001656|ref|OR9A4:-1365|ens|ENST00000311336:-1365
chr7:141070472-141070516
PROMOTER
NC_000007.11[141070472..141070516]
243504 42511 Kbytes .Supplementary data files not provided
Less...
More...