GEO help: Mouse over screen elements for information.
Status
Public on Aug 17, 2006
Title
Agilent-014879 Whole Rat Genome Microarray 4x44K G4131F (Feature Number version)
Technology type
in situ oligonucleotide
Distribution
custom-commercial
Organism
Rattus norvegicus
Manufacturer
Agilent Technologies
Manufacture protocol
see manufacturer's web site at http://www.agilent.com/
Catalog number
G4131F
Description
With a focus on well known rat genes and homologues to human and mouse genes with useful annotation, Agilent's Whole Rat Genome Oligo – 4X44K microarray provides researchers with a new tool for modeling human biology in the rat model organism. For researchers, this means they now have access to a microarray made up of relevant content that has been empirically validated by Agilent. Arrays of this design have barcodes that begin with 16014879 or 2514879. Orientation: Features are numbered numbered Left-to-Right, Top-to-Bottom as scanned by an Agilent scanner (barcode on the left, DNA on the back surface, scanned through the glass), matching the FeatureNum output from Agilent's Feature Extraction software. The ID column represents the Agilent Feature Extraction feature number. Rows and columns are numbered as scanned by an Axon Scanner (barcode on the bottom, DNA on the front surface). To match data scanned on an Axon scanner, use the RefNumber column contained in the Agilent-provided GAL file as the ID_REF column in sample submissions. *** A different version of this platform with the Agilent Probe names in the ID column is assigned accession number GPL7294.
Submission date
Aug 17, 2006
Last update date
Dec 21, 2016
Organization
Agilent Technologies
E-mail(s)
cag_sales-na@agilent.com
Phone
877-424-4536
URL
http://www.agilent.com
Department
Street address
City
Palo Alto
State/province
CA
ZIP/Postal code
94304
Country
USA
Samples (2080)
GSM253585 , GSM253586 , GSM253587 , GSM253588 , GSM253589 , GSM253590
GSM253591 ,
GSM253592 ,
GSM253593 ,
GSM253594 ,
GSM253595 ,
GSM253596 ,
GSM256740 ,
GSM256756 ,
GSM256757 ,
GSM256758 ,
GSM278717 ,
GSM278718 ,
GSM278719 ,
GSM278720 ,
GSM278721 ,
GSM278722 ,
GSM278723 ,
GSM278724 ,
GSM278725 ,
GSM278726 ,
GSM278727 ,
GSM278728 ,
GSM278729 ,
GSM278730 ,
GSM278731 ,
GSM278732 ,
GSM278856 ,
GSM290499 ,
GSM290504 ,
GSM290507 ,
GSM290512 ,
GSM290513 ,
GSM290514 ,
GSM290516 ,
GSM290518 ,
GSM290537 ,
GSM290538 ,
GSM290539 ,
GSM290540 ,
GSM353763 ,
GSM353764 ,
GSM353765 ,
GSM353766 ,
GSM353767 ,
GSM353768 ,
GSM353769 ,
GSM353770 ,
GSM353771 ,
GSM362052 ,
GSM362053 ,
GSM362054 ,
GSM362055 ,
GSM362056 ,
GSM362057 ,
GSM362058 ,
GSM362059 ,
GSM362060 ,
GSM362061 ,
GSM362062 ,
GSM362063 ,
GSM362064 ,
GSM362065 ,
GSM362066 ,
GSM362067 ,
GSM362068 ,
GSM362069 ,
GSM362070 ,
GSM362071 ,
GSM362072 ,
GSM362073 ,
GSM362074 ,
GSM362075 ,
GSM362076 ,
GSM362077 ,
GSM362078 ,
GSM362079 ,
GSM362080 ,
GSM384928 ,
GSM385002 ,
GSM385004 ,
GSM385005 ,
GSM385006 ,
GSM385007 ,
GSM385008 ,
GSM385009 ,
GSM400094 ,
GSM400095 ,
GSM400096 ,
GSM400097 ,
GSM400098 ,
GSM400099 ,
GSM400100 ,
GSM400101 ,
GSM400102 ,
GSM400103 ,
GSM400104 ,
GSM400105 ,
GSM400106 ,
GSM400107 ,
GSM400108 ,
GSM400109 ,
GSM400110 ,
GSM400111 ,
GSM400112 ,
GSM400113 ,
GSM400114 ,
GSM400115 ,
GSM400116 ,
GSM400117 ,
GSM400118 ,
GSM400119 ,
GSM400120 ,
GSM400121 ,
GSM400122 ,
GSM400123 ,
GSM400124 ,
GSM400125 ,
GSM400126 ,
GSM400127 ,
GSM400128 ,
GSM400129 ,
GSM400130 ,
GSM400131 ,
GSM400132 ,
GSM400133 ,
GSM400134 ,
GSM400135 ,
GSM400136 ,
GSM400137 ,
GSM400138 ,
GSM400139 ,
GSM400140 ,
GSM400141 ,
GSM400142 ,
GSM400143 ,
GSM402336 ,
GSM402337 ,
GSM402338 ,
GSM402339 ,
GSM402340 ,
GSM402341 ,
GSM402342 ,
GSM402343 ,
GSM402344 ,
GSM402345 ,
GSM402346 ,
GSM402347 ,
GSM441288 ,
GSM441289 ,
GSM441290 ,
GSM441291 ,
GSM441292 ,
GSM441293 ,
GSM441294 ,
GSM441295 ,
GSM441296 ,
GSM441297 ,
GSM441298 ,
GSM441299 ,
GSM441300 ,
GSM441301 ,
GSM441302 ,
GSM441303 ,
GSM441304 ,
GSM441305 ,
GSM441306 ,
GSM441307 ,
GSM441308 ,
GSM441309 ,
GSM441310 ,
GSM441311 ,
GSM441312 ,
GSM441313 ,
GSM441314 ,
GSM441315 ,
GSM441316 ,
GSM441317 ,
GSM441318 ,
GSM441319 ,
GSM441320 ,
GSM441321 ,
GSM441322 ,
GSM441323 ,
GSM441324 ,
GSM441325 ,
GSM441326 ,
GSM441327 ,
GSM450645 ,
GSM450646 ,
GSM450647 ,
GSM450648 ,
GSM450649 ,
GSM450650 ,
GSM450651 ,
GSM450652 ,
GSM450653 ,
GSM450654 ,
GSM450655 ,
GSM450656 ,
GSM450657 ,
GSM450658 ,
GSM450659 ,
GSM450660 ,
GSM450661 ,
GSM450662 ,
GSM471612 ,
GSM471613 ,
GSM471614 ,
GSM471615 ,
GSM471616 ,
GSM471617 ,
GSM471618 ,
GSM471619 ,
GSM471620 ,
GSM471621 ,
GSM471622 ,
GSM471623 ,
GSM471624 ,
GSM471625 ,
GSM471626 ,
GSM471627 ,
GSM471628 ,
GSM471629 ,
GSM471630 ,
GSM471631 ,
GSM471632 ,
GSM471633 ,
GSM471634 ,
GSM471635 ,
GSM471636 ,
GSM471637 ,
GSM471638 ,
GSM471639 ,
GSM471640 ,
GSM471641 ,
GSM471642 ,
GSM477800 ,
GSM477801 ,
GSM477802 ,
GSM477803 ,
GSM489389 ,
GSM489390 ,
GSM489391 ,
GSM489392 ,
GSM489393 ,
GSM489394 ,
GSM489395 ,
GSM489396 ,
GSM489397 ,
GSM489398 ,
GSM489399 ,
GSM489400 ,
GSM489401 ,
GSM489402 ,
GSM489403 ,
GSM489404 ,
GSM489405 ,
GSM489406 ,
GSM489407 ,
GSM489408 ,
GSM489409 ,
GSM489410 ,
GSM489411 ,
GSM489412 ,
GSM489413 ,
GSM489414 ,
GSM489415 ,
GSM489416 ,
GSM489417 ,
GSM489418 ,
GSM489419 ,
GSM489420 ,
GSM489421 ,
GSM489422 ,
GSM489423 ,
GSM489424 ,
GSM489425 ,
GSM489426 ,
GSM489427 ,
GSM489428 ,
GSM489429 ,
GSM489430 ,
GSM489431 ,
GSM489432 ,
GSM489433 ,
GSM489434 ,
GSM489435 ,
GSM489436 ,
GSM489437 ,
GSM489438 ,
GSM489439 ,
GSM489440 ,
GSM489441 ,
GSM489442 ,
GSM489443 ,
GSM489444 ,
GSM489445 ,
GSM489446 ,
GSM489447 ,
GSM489448 ,
GSM489449 ,
GSM489450 ,
GSM489451 ,
GSM489452 ,
GSM489453 ,
GSM489454 ,
GSM489455 ,
GSM489456 ,
GSM489457 ,
GSM489458 ,
GSM489459 ,
GSM489460 ,
GSM489461 ,
GSM489462 ,
GSM489463 ,
GSM489464 ,
GSM489465 ,
GSM489466 ,
GSM489467 ,
GSM489468 ,
GSM489469 ,
GSM489470 ,
GSM489471 ,
GSM489472 ,
GSM489473 ,
GSM489474 ,
GSM489475 ,
GSM489476 ,
GSM489477 ,
GSM489478 ,
GSM489479 ,
GSM489480 ,
GSM489481 ,
GSM489482 ,
GSM489483 ,
GSM489484 ,
GSM489485 ,
GSM489486 ,
GSM489487 ,
GSM489488 ,
GSM489489 ,
GSM489490 ,
GSM489491 ,
GSM489492 ,
GSM489493 ,
GSM489494 ,
GSM489495 ,
GSM489496 ,
GSM489497 ,
GSM489498 ,
GSM489499 ,
GSM489500 ,
GSM489501 ,
GSM489502 ,
GSM489503 ,
GSM489504 ,
GSM489505 ,
GSM489506 ,
GSM489507 ,
GSM489508 ,
GSM489509 ,
GSM489510 ,
GSM489511 ,
GSM489512 ,
GSM489513 ,
GSM489514 ,
GSM489515 ,
GSM489516 ,
GSM489517 ,
GSM489518 ,
GSM489519 ,
GSM489520 ,
GSM489521 ,
GSM489522 ,
GSM489523 ,
GSM489524 ,
GSM489525 ,
GSM489526 ,
GSM489527 ,
GSM489528 ,
GSM489529 ,
GSM489530 ,
GSM489531 ,
GSM489532 ,
GSM489533 ,
GSM489534 ,
GSM489535 ,
GSM489536 ,
GSM489537 ,
GSM489538 ,
GSM489539 ,
GSM489540 ,
GSM489541 ,
GSM489542 ,
GSM489543 ,
GSM489544 ,
GSM489545 ,
GSM489546 ,
GSM489547 ,
GSM489548 ,
GSM489549 ,
GSM489550 ,
GSM489551 ,
GSM489552 ,
GSM489553 ,
GSM489554 ,
GSM489555 ,
GSM489556 ,
GSM489557 ,
GSM489558 ,
GSM489559 ,
GSM489560 ,
GSM489561 ,
GSM489562 ,
GSM489563 ,
GSM489564 ,
GSM489565 ,
GSM489566 ,
GSM489567 ,
GSM489568 ,
GSM489569 ,
GSM489570 ,
GSM489571 ,
GSM489572 ,
GSM489573 ,
GSM489574 ,
GSM489575 ,
GSM489576 ,
GSM489577 ,
GSM489578 ,
GSM489579 ,
GSM489580 ,
GSM489581 ,
GSM489582 ,
GSM489583 ,
GSM489584 ,
GSM489585 ,
GSM489586 ,
GSM489587 ,
GSM490342 ,
GSM490343 ,
GSM490344 ,
GSM490345 ,
GSM490346 ,
GSM490347 ,
GSM490348 ,
GSM490349 ,
GSM490350 ,
GSM490351 ,
GSM490352 ,
GSM490353 ,
GSM490354 ,
GSM490355 ,
GSM490356 ,
GSM490357 ,
GSM490358 ,
GSM490359 ,
GSM490360 ,
GSM490361 ,
GSM490362 ,
GSM490363 ,
GSM490364 ,
GSM490365 ,
GSM490366 ,
GSM490367 ,
GSM490368 ,
GSM490369 ,
GSM490370 ,
GSM490371 ,
GSM490372 ,
GSM490373 ,
GSM490374 ,
GSM490375 ,
GSM490376 ,
GSM490377 ,
GSM490378 ,
GSM490379 ,
GSM490380 ,
GSM490381 ,
GSM490382 ,
GSM490383 ,
GSM490384 ,
GSM490385 ,
GSM490386 ,
GSM490387 ,
GSM490388 ,
GSM490389 ,
GSM490390 ,
GSM490391 ,
GSM490392 ,
GSM490393 ,
GSM490394 ,
GSM490395 ,
GSM490396 ...
Accession list truncated, click here to browse through all related public accessions You can also download a list of all accessions here
Series (88)
GSE10034
Transcriptomic Analysis of Nephrotoxicity Induced by Cephaloridine, a Representative Cephalosporin Antibiotic
GSE10148
Analysis of Endoglin function in rat hepatic stellate cells (HSC)
GSE11022
Dietary calcium inhibits colitis development in HLA-B27 transgenic rats
GSE11529
Sex-specific early growth hormone response genes in rat liver (Rattus norvegicus)
GSE14094
Diet induced gene expression in rat peripheral blood mononuclear cells
GSE14497
Diet and feeding condition induced gene expression in rat peripheral blood mononuclear cells
GSE15332
Proteomics and transcriptomics analysis of rat retinal ganglion cells exposed to chronic ocular hypertension.
GSE15952
RNA profiles of rat olfactory epithelia : individual and age related variations (gender/supplier experiment)
GSE15953
RNA profiles of rat olfactory epithelia : individual and age related variations (age experiment)
GSE15954
RNA profiles of rat olfactory epithelia : individual and age related variations
GSE16063
Prostates of rats with induced partial bladder outlet obstruction and the effect of Eviprostat on those changes
GSE17698
The genetics of wound healing in tympanic membranes in rats
GSE18016
Identification of genes which are responsible for induction of the initial differentiation process of PC12 cells
GSE19058
Identification of cathepsin L as a potential sex-specific biomarker for renal damage
GSE19250
Comparative Gene Expression Profiling of Olfactory Ensheathing Cells from Olfactory Bulb and Olfactory Mucosa
GSE19628
Liver toxicity induced by munitions compounds TNT, 2,6-DNT, 2,4-DNT, 4A-DNT, and 2A-DNT
GSE19662
Identification of biomarkers that distinguish chemical contaminants using a gradient feature selection method
GSE21068
Estrogen-mediated Epigenetic Repression of Large Chromosomal Regions through DNA Looping
GSE21239
Transcriptional profiling of lung tissue of rat pretreated with cobalt in normoxic and hypoxic conditions and comapring with saline treated normoxic and hypoxic lung tissue in different time interval
GSE21843
Three Major salivary glands
GSE22218
Alteration of the expression and 17, 20 lyase activity of cytochrome P450 17-hydroxylase/17, 20 lyase and of the expression of other Leydig cells genes in the rat fetal testis directly exposed to Mono-ethyl hexyl phthalate in culture.
GSE22622
Neurotoxin tetrodotoxin TTX withdrawal induced neuronal activity: RNA Pol II is poised for rapid induction of arc and other neuronal VF-IEGs
GSE22631
Whole-genome gene expression profiling of F11 dorsal root ganglion (DRG)-like cells stimulated with forskolin
GSE23079
Global gene expression profiling in early-stage polycystic kidney disease in the Han:SPRD Cy rat identifies a role for RXR signaling
GSE23093
Using Oligo Array Analysis to Determine Genes of Importance in the Meninges and Associated Vasculature Function and their Sensitivity to Amphetamine Toxicity
GSE24213
Expression profiling of rat heart and blood after amiodarone treatment
GSE24255
Wide-genome analysis of hepatocytes isolated from male and female rats treated with glucocorticoid.
GSE24377
Gene expression data from liver of rat fed a high-fat diet and high-fructose water without/with Eucommia ulmoides leaves
GSE24431
Evaluation of phenoxybenzamine in the CFA model of pain following gene expression studies and connectivity mapping
GSE25152
Tracheal occlusion conditioning in conscious rats modulates gene expression profile of medial thalamus
GSE25153
Tracheal Occlusion Modulates the Gene Expression Profile of the Medial Thalamus in Anesthetized Rats
GSE26108
Gene expression in colon tissue of rats fed digestion resistant carbohydrates
GSE26937
PAX8 transcriptional profiling in rat PCCL3 cells
GSE26938
Global analysis of in vivo Pax8-binding sites in rat thyroid cells using high-throughput technologies: Chip-Seq and whole genome expression arrays
GSE27956
Insulin biosynthesis in neuronal progenitors derived from adult hippocampus and the olfactory bulb
GSE29114
MAPC culture condition supports the derivation of cells with nascent hypoblast features from bone marrow and blastocysts
GSE29445
Effect of telmisartan on prostate carcinogenesis in TRAP rats
GSE29679
Gene expression signature of DMBA induced hamster buccal pouch carcinomas: Modulation by chlorophyllin, and ellagic acid
GSE30797
Olfactory Enshealting Cells : p75 High vs p75 Low cells population
GSE32891
Discover preclinical biomarkers of hepatotoxicity: Acetaminophen and Carbon tetrachloride
GSE32990
In vitro differentiation of rat multipotent adult porgenitor cells to smooth muscle like cells
GSE33170
Comparison of gene expression profiles in rat sarcomas and masenchymal stem cells (MSCs)
GSE35167
Global gene expression profiling in PPAR-γ agonist-treated kidneys in an orthologous rat model of human autosomal recessive polycystic kidney disease
GSE37413
Genome-wide DNA Microarray Unravels Rapid Changes in the Transcriptome of MK-801 treated Rat Brain
GSE37732
Impact of oral compost-extract administration on gene expression in the rat gastrointestinal tract
GSE40490
Hippocampal gene expression profiling in a rat model of posttraumatic epilepsy reveals temporal upregulation of lipid metabolism-related genes
GSE42579
Gene expression in the right ventricle of Rattus norvegicus during development of right ventricular heart failure and treatment
GSE42793
Intracranial self-stimulation regulates gene expression in rat hippocampus
GSE43375
Striatal molecular signature of subchronic subthalamic nucleus high frequency stimulation in parkinsonian rat
GSE44112
Time dependent expression profiles of mRNAs in rat milk
GSE44114
Time dependent expression profiles of mRNAs and microRNAs in rat milk
GSE44411
Hepatic Gene Expression in woodrats on Creosote and Juniper Diets with distinct Plant Secondary Compounds
GSE45813
Transcriptomic profile of mild exercise-enhanced adult hippocampal neurogenesis: Comparison with the effects of intense exercise
GSE46221
Increase in membrane cholesterol of neurons in culture recapitulates Alzheimer’s disease early phenotypes.
GSE47068
Rat Life Cycle Kidney Male Gene Expression Data
GSE47069
Rat Life Cycle Kidney Female Gene Expression Data
GSE47070
Rat Life Cycle Kidney Gene Expression Data
GSE48623
Analyzing the hippocampal gene network to determine the effects of coral calcium hydride on antioxidant ability in rat brain
GSE52204
A Global Approach to Dissect Palmitate-induced Impairment of Hepatic Glucose Production
GSE52481
Rat Astrocyte-Neuron Co-cultures versus purified co-cultured Astrocytes versus Astrocyte alone
GSE52516
Down-regulation as the dominant hippocampal gene expression profile with voluntary resistance wheel running by DNA microarray analysis
GSE54035
Dextran sodium sulfate treatment of Pirc rats alters colonic and tumor gene expression
GSE54036
Effects of dextran sodium sulfate on normal colonic tissue and tumors in wild type and Apc-Pirc/+ rats.
GSE54897
Peripheral blood mononuclear cells gene expression reflects adaptive response and metabolic damage associated to the intake of diets with an unbalanced proportion of macronutrients
GSE56263
Matrine derivative 1b(MASM) offers radioprotection and modulates acute lethal total-body irradiation-induced alterations of gene expression
GSE57858
Isocaloric intake of diets differing in macronutrient content (high protein or high fat) in adult rats indicate adverse effects as analysed by hepatic transcriptomics
GSE58156
Protective role of Apolipoprotein E in experimental acute renal allogaft rejection
GSE58204
Rat Life Cycle (RLC) Heart Gene Expression Data
GSE58777
Effects of two strains of Lactobacillus fermentum on germ free rats
GSE60013
EB-mediated NPY expression and release
GSE62686
PRR7 is a novel NMDA-dependent inhibitor of c-Jun ubiquitination in neurons
GSE63639
Genome-wide DNA Microarray Analysis Unravels Rapid Changes in the Transcriptome of MK-801 treated Rat Brain
GSE63640
A DNA Microarray Analysis of Rat Intestine, Spleen and Liver Transcriptome after Oral Administration of Lavender Oil
GSE65053
Gene expression signatures following nerve injury in a rat model (0.5h-9h)
GSE65064
Transcriptomic analysis of prefrontal medial cortex, hippocampus and nucleus accumbens of alcohol-preferring and nonpreferring rats
GSE67499
Unraveling the rat blood genome-wide transcriptome after oral administration of Lavender oil by a two-color dye-swap DNA microarray approach
GSE73411
Gene expression signature of Lewis rats with experimental NMO and controls
GSE74976
E16/E19 rat fetus microarray
GSE90779
Islet Inflammation and Ductal Proliferation, a Link to Pancreattisin Type-2 Diabetes?
GSE90956
Microarray analysis of aging-associated immune system alterations in the Rostral Ventral Lateral Medulla of F344 rats
GSE93150
Leptin treatment of offspring during lactation after caloric restriction of dams during pregnancy reverts CR-induced dysfunction
GSE94770
Effect of 2-ITX on mRNA expression in the liver of male Wistar rats
GSE96520
Maternal Western-style diet alters the transcriptome of chemically induced mammary tumors in female offspring rats
GSE96886
Global effect of H2A.Z hypervariant knockdown on basal expression of neuronal genes
GSE97083
An integrative model of cirrhosis-associated hepatocarcinogenesis in rat: histological, biochemical and molecular approaches
GSE119955
Identification of early transcriptome-based biomarkers related to lipid metabolism in peripheral blood mononuclear cells of rats nutritionally programmed for improved metabolic health
GSE183591
Transcriptional study of the temporal evolution after severe traumatic spinal cord injury (SCI) and neural progenitor cells (NPCs)-transplantation intervention.
GSE223333
OMICS Analyses Unraveling Related Gene and Protein Driven Molecular Mechanisms Underlying PACAP 38 Induced Neurite Outgrowth in PC12 Cells
Relations
Alternative to
GPL7294
Data table header descriptions
ID
Agilent feature number
COL
Column
ROW
Row
NAME
Name
SPOT_ID
Spot identifier
CONTROL_TYPE
Control type
REFSEQ
RefSeqAccession
GB_ACC
GenBankAccession
GENE
Entrez Gene ID
GENE_SYMBOL
Gene Symbol
GENE_NAME
Gene Name
UNIGENE_ID
UnigeneID
ENSEMBL_ID
EnsemblID
TIGR_ID
TIGRID
ACCESSION_STRING
Accession String
CHROMOSOMAL_LOCATION
Chromosomal Location
CYTOBAND
Cytoband
DESCRIPTION
Description
GO_ID
GoIDs
SEQUENCE
Data table
ID
COL
ROW
NAME
SPOT_ID
CONTROL_TYPE
REFSEQ
GB_ACC
GENE
GENE_SYMBOL
GENE_NAME
UNIGENE_ID
ENSEMBL_ID
TIGR_ID
ACCESSION_STRING
CHROMOSOMAL_LOCATION
CYTOBAND
DESCRIPTION
GO_ID
SEQUENCE
1
266
170
GE_BrightCorner
GE_BrightCorner
pos
2
266
168
DarkCorner
DarkCorner
pos
3
266
166
DarkCorner
DarkCorner
pos
4
266
164
DarkCorner
DarkCorner
pos
5
266
162
DarkCorner
DarkCorner
pos
6
266
160
DarkCorner
DarkCorner
pos
7
266
158
DarkCorner
DarkCorner
pos
8
266
156
DarkCorner
DarkCorner
pos
9
266
154
DarkCorner
DarkCorner
pos
10
266
152
DarkCorner
DarkCorner
pos
11
266
150
DarkCorner
DarkCorner
pos
12
266
148
AA892298
A_44_P465448
FALSE
AA892298
Rn.14747
gb|AA892298
chr9:57247899-57249303
rn|9q31
AA892298 EST196101 Normalized rat kidney, Bento Soares Rattus sp. cDNA clone RKIAO74 3' end, mRNA sequence [AA892298]
CCACATCTGTATGCAGTGTCACAGACATTCTCCTTCTTGATGCTTCTAGGGAGCACTATT
13
266
146
AI232741
A_44_P514796
FALSE
AI232741
Rn.12611
gb|AI232741|gb|AW254068|gb|BI278122
chr7:122235251-122235192
rn|7q34
AI232741 EST229429 Normalized rat kidney, Bento Soares Rattus sp. cDNA clone RKICF89 3' end, mRNA sequence [AI232741]
GTTTAAAATTTATTGACGTGATTTCCCATAAGGATGACGGCCCAGAAGCACTCAGCTGTG
14
266
144
NM_057188
A_44_P409518
FALSE
NM_057188
NM_057188
117533
Gmpr
guanosine monophosphate reductase
Rn.3862
ENSRNOT00000023613
TC568850
ref|NM_057188|gb|AF090867|ens|ENSRNOT00000023613|tc|TC568850
chr17:25153992-25153933
rn|17p13
Rattus norvegicus guanosine monophosphate reductase (Gmpr), mRNA [NM_057188]
GO:0003824(catalytic activity)|GO:0003920(GMP reductase activity)|GO:0009409(response to cold)|GO:0016491(oxidoreductase activity)|GO:0030955(potassium ion binding)|GO:0046872(metal ion binding)
GCAGAAGCTGAAGCTTTTCTACGGCATGAGCTCAGACACAGCCATGAAGAAACACGCGGG
15
266
142
XM_236342
A_44_P279262
FALSE
XM_236342
Rn.21843
ENSRNOT00000049602
gb|XM_236342|ens|ENSRNOT00000049602
chr8:69116608-69116667
rn|8q24
Rattus norvegicus similar to CRAG protein (4C711) (LOC315756), mRNA [XM_236342]
TTGGGTTTAACGTCTCTGGTAGATGGAAAGTCTGATGGTTCTAGAACGATTCACACTAAC
16
266
140
NM_001014243
A_44_P375042
FALSE
NM_001014243
NM_001014243
365215
RGD1309888
similar to RIKEN cDNA 1500002O20
Rn.32677
ENSRNOT00000026669
TC521750
ref|NM_001014243|gb|XM_344869|gb|BC087051|ens|ENSRNOT00000026669
chr1:79742705-79743531
rn|1q21
Rattus norvegicus similar to RIKEN cDNA 1500002O20 (RGD1309888), mRNA [NM_001014243]
CCACAGCTGTCGCACACAATCCTCACGGAGAAGAACTGGTTCCACTATGCTGCCAGAATC
17
266
138
XM_222163
A_44_P269499
FALSE
XM_222163
Rn.154560
ENSRNOT00000011278
gb|XM_222163|gb|XR_009247|ens|ENSRNOT00000011278
chr12:30395960-30395901
rn|12q14
Rattus norvegicus similar to 17,000 dalton myosin light chain (LOC304447), mRNA [XM_222163]
TGAAATCCGTCATATCCTAGTCACGCTGGGCGAGAATATGACAGAGGAAGAAGTAGAGAT
18
266
136
AA891661
A_44_P204808
FALSE
AA891661
Rn.1618
gb|AA891661
chr4:84396575-84396516
rn|4q24
AA891661 EST195464 Normalized rat kidney, Bento Soares Rattus sp. cDNA clone RKIAF23 3' end, mRNA sequence [AA891661]
TATTCTGCTGCTTCTAAGCACCTGAAGAATGTGGCTCTCGGTTCACGACATGGTTAACGG
19
266
134
NM_033350
A_44_P438090
FALSE
NM_033350
NM_033350
29322
Plcb3
phospholipase C, beta 3
Rn.16983
ENSRNOT00000028720
TC538381
ref|NM_033350|gb|XM_342005|gb|M99567|ens|ENSRNOT00000028720
chr1:209787835-209787776
rn|1q43
Rattus norvegicus phospholipase C, beta 3 (Plcb3), mRNA [NM_033350]
GO:0004629(phospholipase C activity)|GO:0004871(signal transducer activity)|GO:0007242(intracellular signaling cascade)|GO:0016042(lipid catabolism)|GO:0016787(hydrolase activity)
GGCTCAGGGAGGTTGTCCTGGACGCACATACGACTCAGTTCAAGAGGCTGAAGGAGTTGA
20
266
132
XM_214021
A_44_P330643
FALSE
XM_214021
XM_214021
289561
Polr2b_predicted
polymerase (RNA) II (DNA directed) polypeptide B (predicted)
Rn.153952
ENSRNOT00000039252
TC535070
ref|XM_214021|ref|XM_001075841|gb|CB546931|ens|ENSRNOT00000039252
chr14:33077593-33077330
rn|14p11
PREDICTED: Rattus norvegicus polymerase (RNA) II (DNA directed) polypeptide B (predicted) (Polr2b_predicted), mRNA [XM_214021]
GO:0003677(DNA binding)|GO:0005665(DNA-directed RNA polymerase II, core complex)|GO:0006366(transcription from RNA polymerase II promoter)
AGAGGACATGCCGTTCACTTGTGAAGGCATAACTCCTGACATCATCATAAACCCCCACGC
Total number of rows: 45220 Table truncated, full table size 19079 Kbytes .
Supplementary file
Size
Download
File type/resource
GPL4135_old_annotations.txt.gz
5.7 Mb
(ftp) (http)
TXT