GEO help: Mouse over screen elements for information.
Status
Public on Oct 08, 2008
Title
Agilent-014879 Whole Rat Genome Microarray 4x44K G4131F (Probe Name version)
Technology type
in situ oligonucleotide
Distribution
commercial
Organism
Rattus norvegicus Manufacturer
Agilent Technologies
Manufacture protocol
see manufacturer's web site at http://www.agilent.com/
Catalog number
G4131F
Description
Submission date
Sep 11, 2008
Last update date
Sep 13, 2014
Organization
Agilent Technologies
E-mail(s)
cag_sales-na@agilent.com Phone
877-424-4536
URL
http://www.agilent.com Department
Street address
City
Palo Alto
State/province
CA
ZIP/Postal code
94304
Country
USA
Samples (1945)
GSM332901 , GSM332902 , GSM332903 , GSM332904 , GSM332905 , GSM332906
GSM332907 ,
GSM332908 ,
GSM332909 ,
GSM332910 ,
GSM332911 ,
GSM333231 ,
GSM333232 ,
GSM333233 ,
GSM333234 ,
GSM333235 ,
GSM333236 ,
GSM333237 ,
GSM333238 ,
GSM333239 ,
GSM333240 ,
GSM333241 ,
GSM333242 ,
GSM333243 ,
GSM333244 ,
GSM333245 ,
GSM333246 ,
GSM334030 ,
GSM334292 ,
GSM334294 ,
GSM334298 ,
GSM334299 ,
GSM334300 ,
GSM337377 ,
GSM337378 ,
GSM337387 ,
GSM337388 ,
GSM337389 ,
GSM337390 ,
GSM338935 ,
GSM338936 ,
GSM338937 ,
GSM338938 ,
GSM338939 ,
GSM338940 ,
GSM338941 ,
GSM338942 ,
GSM338943 ,
GSM338944 ,
GSM338945 ,
GSM338946 ,
GSM341564 ,
GSM341565 ,
GSM341567 ,
GSM341570 ,
GSM363856 ,
GSM363857 ,
GSM363858 ,
GSM363859 ,
GSM387581 ,
GSM387582 ,
GSM387583 ,
GSM387584 ,
GSM387585 ,
GSM387586 ,
GSM387587 ,
GSM387588 ,
GSM397394 ,
GSM397395 ,
GSM397396 ,
GSM397397 ,
GSM397398 ,
GSM397399 ,
GSM397400 ,
GSM397401 ,
GSM401388 ,
GSM402895 ,
GSM402897 ,
GSM402900 ,
GSM402902 ,
GSM402903 ,
GSM402904 ,
GSM402905 ,
GSM402906 ,
GSM402907 ,
GSM402908 ,
GSM402909 ,
GSM404323 ,
GSM404324 ,
GSM404325 ,
GSM404326 ,
GSM404327 ,
GSM404328 ,
GSM419313 ,
GSM419314 ,
GSM419315 ,
GSM419316 ,
GSM419317 ,
GSM419318 ,
GSM419319 ,
GSM419320 ,
GSM420190 ,
GSM420191 ,
GSM420192 ,
GSM420193 ,
GSM420194 ,
GSM420195 ,
GSM420196 ,
GSM420197 ,
GSM420198 ,
GSM420199 ,
GSM420200 ,
GSM420201 ,
GSM420202 ,
GSM420203 ,
GSM420204 ,
GSM420205 ,
GSM420206 ,
GSM420207 ,
GSM420208 ,
GSM420209 ,
GSM420210 ,
GSM420211 ,
GSM420212 ,
GSM420213 ,
GSM420214 ,
GSM420215 ,
GSM420216 ,
GSM420217 ,
GSM420218 ,
GSM420219 ,
GSM420220 ,
GSM420221 ,
GSM420222 ,
GSM420223 ,
GSM420224 ,
GSM420225 ,
GSM420226 ,
GSM420227 ,
GSM420228 ,
GSM420229 ,
GSM420230 ,
GSM420231 ,
GSM425134 ,
GSM425135 ,
GSM425136 ,
GSM425137 ,
GSM425138 ,
GSM442196 ,
GSM442613 ,
GSM442614 ,
GSM442615 ,
GSM442616 ,
GSM442617 ,
GSM442618 ,
GSM442619 ,
GSM442620 ,
GSM442621 ,
GSM442622 ,
GSM442623 ,
GSM442660 ,
GSM442661 ,
GSM442994 ,
GSM442995 ,
GSM442996 ,
GSM442997 ,
GSM442998 ,
GSM442999 ,
GSM443000 ,
GSM443001 ,
GSM458149 ,
GSM458150 ,
GSM458151 ,
GSM458152 ,
GSM458153 ,
GSM458154 ,
GSM458155 ,
GSM458156 ,
GSM458157 ,
GSM458158 ,
GSM458159 ,
GSM458160 ,
GSM481214 ,
GSM481215 ,
GSM481216 ,
GSM481217 ,
GSM524517 ,
GSM524518 ,
GSM524519 ,
GSM524520 ,
GSM524521 ,
GSM524522 ,
GSM524523 ,
GSM524524 ,
GSM524525 ,
GSM524526 ,
GSM524527 ,
GSM524528 ,
GSM524529 ,
GSM524530 ,
GSM524531 ,
GSM524532 ,
GSM524533 ,
GSM524534 ,
GSM524535 ,
GSM524536 ,
GSM524537 ,
GSM524538 ,
GSM524539 ,
GSM524540 ,
GSM524541 ,
GSM524542 ,
GSM524543 ,
GSM524544 ,
GSM524545 ,
GSM524546 ,
GSM524547 ,
GSM524548 ,
GSM524549 ,
GSM524550 ,
GSM524551 ,
GSM524552 ,
GSM524553 ,
GSM524554 ,
GSM524555 ,
GSM524556 ,
GSM524557 ,
GSM524558 ,
GSM524559 ,
GSM524560 ,
GSM524561 ,
GSM524562 ,
GSM524563 ,
GSM524564 ,
GSM524565 ,
GSM524566 ,
GSM524567 ,
GSM524568 ,
GSM524569 ,
GSM524570 ,
GSM524571 ,
GSM524572 ,
GSM524573 ,
GSM524574 ,
GSM524575 ,
GSM524576 ,
GSM524577 ,
GSM524578 ,
GSM524579 ,
GSM524580 ,
GSM524581 ,
GSM524582 ,
GSM524583 ,
GSM524584 ,
GSM524585 ,
GSM524586 ,
GSM524587 ,
GSM524588 ,
GSM524589 ,
GSM524590 ,
GSM524591 ,
GSM524592 ,
GSM524593 ,
GSM524594 ,
GSM524595 ,
GSM524596 ,
GSM524597 ,
GSM524598 ,
GSM524599 ,
GSM524600 ,
GSM524601 ,
GSM524602 ,
GSM524603 ,
GSM524604 ,
GSM524605 ,
GSM524606 ,
GSM524607 ,
GSM524608 ,
GSM524609 ,
GSM533099 ,
GSM533100 ,
GSM533101 ,
GSM533102 ,
GSM533103 ,
GSM533104 ,
GSM533105 ,
GSM533106 ,
GSM533107 ,
GSM533108 ,
GSM533109 ,
GSM533110 ,
GSM533111 ,
GSM533112 ,
GSM533113 ,
GSM533114 ,
GSM533115 ,
GSM533116 ,
GSM533117 ,
GSM533118 ,
GSM533119 ,
GSM533120 ,
GSM533121 ,
GSM533122 ,
GSM533123 ,
GSM533124 ,
GSM533125 ,
GSM533126 ,
GSM533127 ,
GSM533128 ,
GSM533129 ,
GSM533130 ,
GSM533131 ,
GSM533132 ,
GSM533133 ,
GSM533134 ,
GSM533135 ,
GSM533136 ,
GSM533137 ,
GSM533138 ,
GSM533139 ,
GSM533140 ,
GSM533141 ,
GSM533142 ,
GSM533143 ,
GSM533144 ,
GSM533145 ,
GSM533146 ,
GSM533147 ,
GSM533148 ,
GSM533149 ,
GSM533150 ,
GSM533151 ,
GSM533152 ,
GSM533153 ,
GSM533154 ,
GSM533155 ,
GSM533156 ,
GSM533157 ,
GSM533158 ,
GSM533159 ,
GSM533160 ,
GSM533161 ,
GSM533162 ,
GSM533163 ,
GSM533164 ,
GSM533165 ,
GSM533166 ,
GSM533167 ,
GSM533168 ,
GSM533169 ,
GSM533170 ,
GSM533171 ,
GSM533172 ,
GSM533173 ,
GSM533174 ,
GSM533175 ,
GSM533176 ,
GSM533177 ,
GSM533178 ,
GSM533179 ,
GSM533180 ,
GSM533181 ,
GSM533182 ,
GSM533183 ,
GSM533184 ,
GSM533185 ,
GSM533186 ,
GSM533187 ,
GSM533188 ,
GSM534858 ,
GSM534859 ,
GSM534860 ,
GSM534861 ,
GSM558658 ,
GSM558659 ,
GSM558660 ,
GSM558661 ,
GSM558662 ,
GSM558663 ,
GSM563163 ,
GSM563164 ,
GSM563165 ,
GSM563166 ,
GSM563167 ,
GSM563168 ,
GSM563169 ,
GSM563170 ,
GSM563171 ,
GSM563172 ,
GSM563173 ,
GSM563174 ,
GSM563175 ,
GSM590025 ,
GSM590026 ,
GSM590027 ,
GSM590028 ,
GSM590029 ,
GSM590030 ,
GSM590031 ,
GSM590032 ,
GSM652248 ,
GSM652249 ,
GSM652250 ,
GSM652251 ,
GSM652252 ,
GSM652253 ,
GSM652254 ,
GSM652255 ,
GSM652256 ,
GSM652257 ,
GSM652258 ,
GSM652259 ,
GSM652260 ,
GSM678547 ,
GSM678548 ,
GSM678549 ,
GSM678550 ,
GSM678551 ,
GSM678552 ,
GSM678553 ,
GSM678554 ,
GSM678555 ,
GSM678556 ,
GSM678557 ,
GSM678558 ,
GSM698360 ,
GSM698361 ,
GSM698362 ,
GSM698363 ,
GSM698364 ,
GSM698365 ,
GSM698366 ,
GSM698367 ,
GSM698368 ,
GSM698369 ,
GSM698370 ,
GSM698371 ,
GSM698372 ,
GSM698373 ,
GSM698374 ,
GSM698375 ,
GSM698376 ,
GSM698377 ,
GSM698378 ,
GSM698379 ,
GSM698380 ,
GSM698381 ,
GSM698382 ,
GSM698383 ,
GSM698384 ,
GSM698385 ,
GSM698386 ,
GSM698387 ,
GSM698388 ,
GSM698389 ,
GSM698390 ,
GSM698391 ,
GSM698392 ,
GSM698393 ,
GSM698394 ,
GSM698395 ,
GSM698396 ,
GSM698397 ,
GSM698398 ,
GSM698399 ,
GSM698400 ,
GSM698401 ,
GSM711426 ,
GSM711427 ,
GSM711428 ,
GSM711429 ,
GSM711430 ,
GSM711431 ,
GSM711432 ,
GSM711433 ,
GSM711434 ,
GSM711435 ,
GSM711436 ,
GSM711437 ,
GSM711438 ,
GSM711439 ,
GSM711440 ,
GSM711441 ,
GSM714108 ,
GSM714109 ,
GSM714110 ,
GSM714111 ,
GSM714112 ,
GSM714113 ,
GSM714114 ,
GSM714115 ,
GSM714116 ,
GSM714117 ,
GSM714118 ,
GSM714119 ,
GSM714120 ,
GSM714121 ,
GSM714122 ,
GSM714123 ,
GSM714124 ...
Accession list truncated, click here to browse through all related public accessions You can also download a list of all accessions here Series (111)
GSE13166 Rat medial prefrontal cortex gene expression following heroin self-administration, abstinence, and extinction
GSE13193 The effects of edema on intestinal smooth muscle
GSE13249 Gene expression profiles in rat lung after inhalation exposure to C60 fullerene or ultrafine NiO particles
GSE13359 Rat iPS F65 cells' gene expression difference compared with that of the adult cells including rat BMC and PEF cells
GSE13360 Rat iPS M13 cells' gene expression difference compared with that of the adult cells including rat BMC and PEF cells
GSE13461 Sexual Dimorphic Regulation of Liver Gene Expression by Glucocorticoids
GSE13462 Comparison of human ES cells, mouse ES cells, rat iPS cells and their somatic cells.
GSE13572 Rat heart cells' gene expression difference compared with that of the adult cells including rat BMC and PEF cells
GSE13573 Rat lung cells' gene expression difference compared with that of the adult cells including rat BMC and PEF cells
GSE14544 Colon mucosa of F344 rats: control treated with 5% DSS vs Resveratrol + 5% DSS
GSE15449 Thrombopoietin (TPO) protects against heart damage induced by doxorubicin and infarction in rat models
GSE15813 High weight differences between donor and recipient affect early kidney graft function -a role for IL-6 signaling
GSE16137 Differential gene profile of resorbed embryos following paternal tamoxifen treatment
GSE16138 Transcriptome analysis of mesothelioma induced by intraperitoneal injections of ferric saccharate in rats
GSE16735 Evidence for a rheostat that determines neuronal survival after traumatic brain injury
GSE16764 Comparative microarray analyses between the rat superior olivary complex and the brain
GSE16985 Neonatal Hydrocephalus: Saline Control vs. Kaolin-Induced
GSE17747 Gene expression profiles in rat lung following intratracheal instillation with C60 fullerene particles
GSE18356 Network analysis of differentially expressed genes in a rat model of neonatal HI encephalopathy +/- antioxidant
GSE19394 Borna disease virus phosphoprotein expression affects glial functions in the C6 glioma cells
GSE20980 Temporal Gene Expression Profiling of Bone Repair in a Rat Calvarial Defect
GSE21335 Rat life cycle liver gene expression
GSE21406 Potential Target Genes of MicroRNA-21 In Ischemia-Reperfusion Injury Of The Gracilis Muscle In Rats
GSE21423 MicroRNA Profiling in Ischemia-Reperfusion Injury of the Gracilis Muscle in Rats
GSE22489 Thrombopoietin (TPO) protects against heart damage induced infarction in rat model
GSE22770 Comparison of rat mammary carcinomas induced by pre- and postpubertal irradiation
GSE23941 Leptin dependent control of testosterone regulated hepatic lipid metabolism
GSE26528 NGF and proNGF activate functionally distinct mRNAs in PC12 cells: an early gene expression profiling
GSE27465 Fish oil alters tamoxifen-modulated expression of genes related to differentiation, proliferation, metastasis, and immune response in rat mammary tumors
GSE28202 A molecular and phenotypic integrative approach to identify a no effect dose level for anti-androgen induced testicular toxicity
GSE28717 Gene expression profiles of rat tissues surrounding Vcap xenograft tumors with chemical or physical denervation.
GSE28831 Changes in gene expression in the retina of diabetic Long Evans rats after one, four, and twelve weeks of diabetes
GSE28982 Gene expression profiles of denervation in prostate cells
GSE29733 Comparison of the global gene expression of choroid plexus and meninges and associated vasculature under control conditions and after pronounced hyperthermia or amphetamine toxicity
GSE30165 Gene expression signatures following nerve injury in a rat model (0d-14d)
GSE30322 Gene Expression Analyses of Subchondral Bone in Early Experimental Osteoarthritis by Microarray
GSE32437 Gene profiles during vestibular compensation in unilateral labyrinthectomized rats
GSE33175 Gene expression signatures following nerve injury in a rat model (0h-9h)
GSE33725 Effect of erythropoietin on cerebral ischemia-induced changes in gene expression in rats
GSE34003 Time course expression study in the rat superior olivary complex
GSE34250 Cross-Species Comparisons of Transcriptomic Alterations in Human and Rat Primary Hepatocytes Exposed to 2,3,7,8-Tetrachlorodibenzo-p-dioxin: rat samples
GSE34251 Cross-Species Comparisons of Transcriptomic Alterations in Human and Rat Primary Hepatocytes Exposed to 2,3,7,8-Tetrachlorodibenzo-p-dioxin
GSE35697 Mechanistic evaluation of the insulin response in H4IIE hepatoma cells: New endpoints for toxicity testing?
GSE36010 mRNA profiles after experimental ischemia
GSE36470 Rat superior olivary complex
GSE37564 Expression profile of PC12 cells stimulated by nerve growth factor measured by Agilent microarray
GSE37777 Comprehensive gene expression analysis of cerebral cortices from mature rats after neonatal hypoxic-ischemic brain injury
GSE38950 Comprehensive expression analysis of primary hepatocytes under four different culture conditions
GSE39344 New insights into the molecular mechanisms of 1,3-dinitrobenzene-induced testicular toxicity
GSE39350 Gene expression profiles of non-genotoxic hepatocarcinogens and hepatotoxicants in rat liver
GSE39378 Hepatic transcriptome of rats treated with vehicle or fipronil (3 mg/kg/d per os for 14 days)
GSE41540 Genes induced after BDV infection in Sprague Dawley and Lewis rats
GSE41901 Comparison of the effects of Tris (2-ethylhexyl) trimellitate (TOTM) on gene expression associated with testicular maldevelopment (TMD) in male rat foetal testes by transcription profiling
GSE43671 Time-Dependent Gene Profiling Indicates the Presence of Different Phases for Ischemia/Reperfusion Injury in Retina
GSE44144 Development of gene expression signatures for senecionine exposure
GSE45560 Analysis of gene expression during glucocorticoid-induced apoptosis of rat primary thymocytes
GSE48011 Mesenchymal stem cells gene expression on liver after ischemia-reperfusion injury.
GSE48298 Transcriptome analysis of mesothelioma induced by intraperitoneal injections of asbestos in rats
GSE48455 Translation value of the bleomycin rat model for the treatment of patients with Idiopathic Pulmonary Fibrosis (IPF)
GSE48795 Differential transcrpitome analysis of Sertoli cells during their phases of postnatal maturation in rat testes
GSE49473 A Genomics-Based Analysis of Relative Potencies of Dioxin-Like Compounds in Primary Rat Hepatocytes
GSE50664 Gene expression profiles in rat lung following intratracheal instillation with single-wall carbon nanotubes
GSE50804 Effects of gentamycin on gene expression of kidney in SD rats
GSE50941 Opposing Effects of HIF1α and HIF2α on Chromaffin Cell Phenotypic Features and Tumor Cell Proliferation: Insights from MAX [rat]
GSE51087 Opposing Effects of HIF1α and HIF2α on Chromaffin Cell Phenotypic Features and Tumor Cell Proliferation: Insights from MAX
GSE55803 Rat hypothalamus: Methimazole (MMI)-saline vs MMI-T3
GSE57692 Hong Shan Capsule (HSC) offers radioprotection and modulates acute lethal total-body irradiation-induced alterations of gene expression in rats
GSE58302 10nM insulin stimulation of Fao Cells
GSE61319 Gene expression profiles in rat alveolar macrophages exposure to impurity-free single-wall carbon nanotubes
GSE61483 Gene expression profiles in rat lung following intratracheal instillation with impurity-free single-wall carbon nanotubes
GSE61498 Development of gene expression for stress in heat- and shake-induced injury in the rat jejunum
GSE62994 Microarray analysis of the therapeutic effects of the mixture of salvianolic acids from Salvia miltiorrhiza and total flavonoids from Anemarrhena asphodeloides on sulfur mustard-induced damages
GSE64733 Identification of molecules from dying cells that act as signals to promote proliferation of surrounding cells
GSE67788 Transcriptional analysis of apoptotic cerebellar granule neurons following rescue by Gip, Sp, Pacap and Igf1
GSE68973 Prenatal exposure to bisphenol A, genistein and indole-3-carbinol on early mammary gland development and carcinogenesis in female Sprague-Dawley offspring
GSE70662 Gene expression in response to low-intensity pulsed ultrasound treatment of bone marrow cells under osteogenic conditions in vitro
GSE72004 Comparison of radiation-induced rat mammary carcinomas from individuals with different sensitivity to diet-induced obesity
GSE72181 Differential Gene Expression Profiles of PASMCs Induced by Quercetin under Hypoxia
GSE72431 Self-maintenance of rat C6 glioma stem cells (GSCs) by their non-GSC progenies
GSE72569 Effects of residual metals contained in single-wall carbon nanotubes on cellular response in rat alveolar macrophages and human alveolar epithelial cell line
GSE75148 Gene expression profiles in rat lung following intratracheal instillation with short size single-wall and multi-wall carbon nanotubes
GSE75275 Effect of fipronil on the thyroid gland transcriptome in the rat
GSE77591 Rat cardiomyocyte; control vs celecoxib treatment
GSE77880 Rat cardiomyocyte: control vs diclofenac treatment
GSE83308 Differential analysis of testosterone induced genes by peritubular cells
GSE85785 Leptin-Mediated Gene Expression Profiling Exhibits New Candidate Genes Associated with Osteoarthritis in Rat
GSE86270 Dietary zinc deficiency and supplementation in early life and mammary tumors development in adulthood female rats
GSE87261 Transcriptomic data to assess hexavalent chromium mode of action in mice and rats [rat]
GSE87262 Transcriptomic data to assess hexavalent chromium mode of action in mice and rats
GSE94678 Acutely Injured Kidneys Release Proteins into the Serum that Cause Oxidative Stress
GSE94780 Gene expression in rat striatum following carbon monoxide poisoning and hypoxic hypoxia
GSE100006 Developing the gene expression of glomerulus in anti-Thy1 nephritis
GSE100173 Alterations in the Transcriptional Profile of the Liver Tissue and the Therapeutic Effects of Propolis Extracts in Alcohol-induced Steatosis in Rats
GSE100177 Gene expression profiles in rat alveolar macrophages exposure to exfoliated graphene
GSE104191 A senescent liver is rejuvenated in a young systemic environment: A study based on comparison of chronological and biological ages
GSE115662 Optimizing Personalized Therapy for Rheumatoid Arthritis Using a Novel Drug Combination of Bioactive Chemical Constituents Derived from a Classic Chinese Herbal Formula
GSE124639 Investigation of gene expression profiles in a rat adjuvant arthritis model
GSE126835 Goto-Kakizaki rats with Roux-en-Y gastric bypass surgery
GSE136098 Identification of AIA-related genes
GSE137008 Gene expression profiles in rat alveolar macrophages exposure to multi-walled carbon nanotubes
GSE137131 The novel long noncoding RNA Lnc19959.2 modulating triglyceride metabolism associated genes through interaction with Purb and hnRNPA2B1
GSE144262 Comprehensive Expression Analysis of mRNA and microRNA for Investigation of Compensatory Mechanisms in the Rat Kidney after Unilateral Nephrectomy (Male_mRNA)
GSE144263 Comprehensive Expression Analysis of mRNA and microRNA for Investigation of Compensatory Mechanisms in the Rat Kidney after Unilateral Nephrectomy (Female_mRNA)
GSE144264 Comprehensive Expression Analysis of mRNA and microRNA for Investigation of Compensatory Mechanisms in the Rat Kidney after Unilateral Nephrectomy
GSE145223 To investigate gene expression changes in neurons lacking cap methyltransferase 1 (CMTR1)
GSE154013 Gene expression profiles in rat lung following intratracheal instillation with cellulose nanofibrils and multi-walled carbon nanotubes
GSE163132 Dynamic gene expression in Schwann cell for regulating myelination
GSE178083 Gene expression profiles in rat alveolar macrophages exposure to submicron carbon fibers
GSE189942 Identification of AIA_H related genes and BHGZD therapeutic effect related genes. [array]
GSE190523 Identification of AIA_H related genes and BHGZD therapeutic effect related genes.
GSE241791 Gene expression profiles in rat alveolar macrophages exposure to cellulose nanofibrils, microcrystalline cellulose, and lipopolysaccharide.
Relations Alternative to
GPL4135
Data table header descriptions ID Agilent feature number
SPOT_ID Spot identifier
CONTROL_TYPE Control type
REFSEQ RefSeq Accession number
GB_ACC GenBank Accession number
GENE Entrez Gene ID
GENE_SYMBOL Gene Symbol
GENE_NAME Gene Name
UNIGENE_ID UnigeneID
ENSEMBL_ID EnsemblID
TIGR_ID TIGRID
ACCESSION_STRING Accession String
CHROMOSOMAL_LOCATION Chromosomal Location
CYTOBAND Cytoband
DESCRIPTION Description
GO_ID GoIDs
SEQUENCE Sequence
Data table ID SPOT_ID CONTROL_TYPE REFSEQ GB_ACC GENE GENE_SYMBOL GENE_NAME UNIGENE_ID ENSEMBL_ID TIGR_ID ACCESSION_STRING CHROMOSOMAL_LOCATION CYTOBAND DESCRIPTION GO_ID SEQUENCE A_42_P453055
A_42_P453055
FALSE
NM_031752 NM_031752 78958 Bcam
basal cell adhesion molecule
Rn.7003
ENSRNOT00000045574
ref|NM_031752|ens|ENSRNOT00000045574|gb|AB035510|gb|BC072479
chr1:79069491-79069432
rn|1q21
Rattus norvegicus basal cell adhesion molecule (Bcam), mRNA [NM_031752]
GO:0005055(laminin receptor activity)|GO:0005886(plasma membrane)|GO:0007155(cell adhesion)|GO:0007160(cell-matrix adhesion)|GO:0009986(cell surface)|GO:0016021(integral to membrane)|GO:0043236(laminin binding)
TGGCAGTCAGCGTCGGTCTCTTGCTACTCGTAGTCGCTGCTTTCTACTGCATGAGACGCA
A_42_P453737
A_42_P453737
FALSE
FM085525 Rn.163289
gb|FM085525|tc|TC588956|gb|AW918040
chr15:66484938-66484997
rn|15q12
FM085525 etnoaor Rattus norvegicus cDNA clone etnoaorP0061C11 5', mRNA sequence [FM085525]
AAATGGCACCGTAAAATATAGTCATGTAGTAATGAGCAGTATGCTTTATGAGAACCAGGT
A_42_P453894
A_42_P453894
FALSE
NM_001108296 NM_001108296 360617 Mien1
migration and invasion enhancer 1
Rn.143893
ENSRNOT00000009485
ref|NM_001108296|ens|ENSRNOT00000009485|gb|FQ214212|tc|TC587562
chr10:87243261-87243202
rn|10q31
Rattus norvegicus migration and invasion enhancer 1 (Mien1), mRNA [NM_001108296]
GO:0005829(cytosol)|GO:0008430(selenium binding)|GO:0030335(positive regulation of cell migration)|GO:0031235(intrinsic to internal side of plasma membrane)|GO:0043066(negative regulation of apoptotic process)|GO:0045454(cell redox homeostasis)|GO:0051491(positive regulation of filopodium assembly)
CACAAAGAGGGATTAGACATTTCTATGGTCTAAGGAAGAAAAGAGATGTTCTCCGTGGAC
A_42_P453935
A_42_P453935
FALSE
NM_001198580 NM_001198580 288770 Naca
nascent polypeptide-associated complex alpha subunit
Rn.162909
ENSRNOT00000003550
ref|NM_001198580|ref|NM_001105939|ref|NM_001198562|ens|ENSRNOT00000003550
chr7:1341431-1341490
rn|7q11
Rattus norvegicus nascent polypeptide-associated complex alpha subunit (Naca), transcript variant 3, mRNA [NM_001198580]
TTACAGGGGTTACGAGAGTCACTATCCGGAAATCTAAAAATATCCTCTTTGTCATCACAA
A_42_P453959
A_42_P453959
FALSE
NM_001107833 NM_001107833 311866 Lrsam1
leucine rich repeat and sterile alpha motif containing 1
Rn.61607
ENSRNOT00000060186
ref|NM_001107833|ens|ENSRNOT00000060186|ens|ENSRNOT00000034151|tc|TC599544
chr3:11918584-11918525
rn|3p11
Rattus norvegicus leucine rich repeat and sterile alpha motif containing 1 (Lrsam1), mRNA [NM_001107833]
GO:0000209(protein polyubiquitination)|GO:0004842(ubiquitin-protein ligase activity)|GO:0005737(cytoplasm)|GO:0008270(zinc ion binding)|GO:0030163(protein catabolic process)|GO:0044425(membrane part)|GO:0045806(negative regulation of endocytosis)|GO:0046755(non-lytic virus budding)|GO:0046872(metal ion binding)|GO:0051865(protein autoubiquitination)|GO:0070086(ubiquitin-dependent endocytosis)
AACGAAGCAGGAAAATTACTGGCTCATCCAGTACCAACGGCTTTTGAACCAGAAGCCTTT
A_42_P453976
A_42_P453976
FALSE
XM_219476 XM_219476 309104 Ifitm6
interferon induced transmembrane protein 6
Rn.136568
ref|XM_219476|ref|XM_001061891|tc|TC646750
chr1:201204979-201204920
rn|1q41
PREDICTED: Rattus norvegicus interferon induced transmembrane protein 6 (Ifitm6), mRNA [XM_219476]
GO:0009607(response to biotic stimulus)|GO:0016021(integral to membrane)
CAGGGATAACAAGCCTATCCTATAGCCGACATAATTAGAACCTACTAGTTAGGTACTAAC
A_42_P454824
A_42_P454824
FALSE
NM_001107511 NM_001107511 308578 Ap2a1
adaptor-related protein complex 2, alpha 1 subunit
Rn.162416
ENSRNOT00000042370
ref|NM_001107511|ens|ENSRNOT00000042370|ens|ENSRNOT00000020304|tc|TC625835
chr1:95377775-95377716
rn|1q22
Rattus norvegicus adaptor-related protein complex 2, alpha 1 subunit (Ap2a1), mRNA [NM_001107511]
GO:0005515(protein binding)|GO:0006886(intracellular protein transport)|GO:0008022(protein C-terminus binding)|GO:0008150(biological_process)|GO:0008565(protein transporter activity)|GO:0016020(membrane)|GO:0016192(vesicle-mediated transport)|GO:0016323(basolateral plasma membrane)|GO:0016324(apical plasma membrane)|GO:0030117(membrane coat)|GO:0030131(clathrin adaptor complex)|GO:0043234(protein complex)
ACCTACATCAAGTTCATCAACCTCTTCCCTGAGACCAAGGCCACCATCCAAGGTGTTCTT
A_42_P454907
A_42_P454907
FALSE
NM_053644 NM_053644 114102 Cdh23
cadherin-related 23
Rn.208796
ENSRNOT00000043015
ref|NM_053644|ens|ENSRNOT00000043015|ens|ENSRNOT00000048029|gb|AB053447
chr20:27622552-27622493
rn|20q11
Rattus norvegicus cadherin 23 (otocadherin) (Cdh23), mRNA [NM_053644]
GO:0001917(photoreceptor inner segment)|GO:0005509(calcium ion binding)|GO:0005829(cytosol)|GO:0005886(plasma membrane)|GO:0005929(cilium)|GO:0005932(microtubule basal body)|GO:0006816(calcium ion transport)|GO:0007155(cell adhesion)|GO:0007156(homophilic cell adhesion)|GO:0007605(sensory perception of sound)|GO:0007626(locomotory behavior)|GO:0008344(adult locomotory behavior)|GO:0016021(integral to membrane)|GO:0032420(stereocilium)|GO:0032426(stereocilium bundle tip)|GO:0042472(inner ear morphogenesis)|GO:0042491(auditory receptor cell differentiation)|GO:0045202(synapse)|GO:0045494(photoreceptor cell maintenance)|GO:0048563(post-embryonic organ morphogenesis)|GO:0048839(inner ear development)|GO:0050910(detection of mechanical stimulus involved in sensory perception of sound)|GO:0050953(sensory perception of light stimulus)|GO:0050957(equilibrioception)|GO:0051480(cytosolic calcium ion homeostasis)|GO:0060013(righting reflex)|GO:0060088(auditory receptor cell stereocilium organization)
CATCCTGCCAGAAACTGATTCAGCATCTGATCTCTACCTTCATAAAATTGGTTATTTTTT
A_42_P454929
A_42_P454929
FALSE
NM_001108469 NM_001108469 361505 Cdc42ep5
CDC42 effector protein (Rho GTPase binding) 5
Rn.198486
ENSRNOT00000025110
ref|NM_001108469|ens|ENSRNOT00000025110|tc|TC595652|gb|XM_341784
chr1:69449824-69449883
rn|1q12
Rattus norvegicus CDC42 effector protein (Rho GTPase binding) 5 (Cdc42ep5), mRNA [NM_001108469]
GO:0005737(cytoplasm)|GO:0005886(plasma membrane)|GO:0007254(JNK cascade)|GO:0007266(Rho protein signal transduction)|GO:0008360(regulation of cell shape)|GO:0016020(membrane)|GO:0017049(GTP-Rho binding)|GO:0030838(positive regulation of actin filament polymerization)|GO:0031274(positive regulation of pseudopodium assembly)
ACTGCTGCTCCAATGCTGACTTCCAGCTGGATGATGTCATTGGTCTGTAGTATCTTGATT
A_42_P454990
A_42_P454990
FALSE
XM_002729425 312678 Jarid1a
jumonji, AT rich interactive domain 1A (Rbp2 like)
Rn.224608
ENSRNOT00000034548
ens|ENSRNOT00000034548|gb|FQ226640|gb|FQ232821|gb|FQ225527
chr4:156800322-156802352
rn|4q42
Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:E9PSM3] [ENSRNOT00000034548]
ACCCTCAGAGGACAGATTCTTACATATCATGGAGGATGATAGCGTAGAAGAGAAACCATT
A_42_P455025
A_42_P455025
FALSE
AW143304 Rn.44903
tc|TC598723|gb|AW143304
chr18:074528264-074528205
rn|18q12.3
AW143304 EST293600 Normalized rat brain, Bento Soares Rattus sp. cDNA clone RGIBK05 5' end, mRNA sequence [AW143304]
GCCTGAAAGTATAATTATCCTGATTAAATCATTCTCATTCTCATTAATACCACCGATCCC
A_42_P455078
A_42_P455078
FALSE
NM_001039020 NM_001039020 303763 Zfp207
zinc finger protein 207
Rn.163156
ENSRNOT00000000252
ref|NM_001039020|ens|ENSRNOT00000000252|ens|ENSRNOT00000065567|ens|ENSRNOT00000000253
chr10:68624972-68625031
rn|10q26
Rattus norvegicus zinc finger protein 207 (Zfp207), mRNA [NM_001039020]
GO:0005622(intracellular)|GO:0005634(nucleus)|GO:0005730(nucleolus)|GO:0008201(heparin binding)|GO:0008270(zinc ion binding)
GTCGCAAGGTGGCCGTTACTGATCTTACTTCAAGTCTAATAGGTTTGGAGATTAAACCTT
A_42_P455531
A_42_P455531
FALSE
NM_012527 NM_012527 24260 Chrm3
cholinergic receptor, muscarinic 3
Rn.87735
ENSRNOT00000019662
ref|NM_012527|ens|ENSRNOT00000019662|gb|M16407|tc|TC574260
chr17:71218326-71218385
rn|17q12.1
Rattus norvegicus cholinergic receptor, muscarinic 3 (Chrm3), mRNA [NM_012527]
GO:0003056(regulation of vascular smooth muscle contraction)|GO:0004871(signal transducer activity)|GO:0004872(receptor activity)|GO:0004930(G-protein coupled receptor activity)|GO:0005886(plasma membrane)|GO:0006939(smooth muscle contraction)|GO:0007213(G-protein coupled acetylcholine receptor signaling pathway)|GO:0007586(digestion)|GO:0008144(drug binding)|GO:0016021(integral to membrane)|GO:0016323(basolateral plasma membrane)|GO:0016907(G-protein coupled acetylcholine receptor activity)|GO:0019229(regulation of vasoconstriction)|GO:0030054(cell junction)|GO:0030425(dendrite)|GO:0032279(asymmetric synapse)|GO:0042166(acetylcholine binding)|GO:0043679(axon terminus)|GO:0045211(postsynaptic membrane)|GO:0045987(positive regulation of smooth muscle contraction)
AAAGCTGCTTTTGTATTCAGTGTGAGGTGGTGTTTACAGCCGACTTTGACATCAGTGGGT
A_42_P455785
A_42_P455785
FALSE
NM_080781 NM_080781 114023 Copb1
coatomer protein complex, subunit beta 1
Rn.4327
ENSRNOT00000016292
ref|NM_080781|ens|ENSRNOT00000016292|gb|X57228|gb|BC061882
chr1:172200815-172200007
rn|1q34
Rattus norvegicus coatomer protein complex, subunit beta 1 (Copb1), mRNA [NM_080781]
GO:0000139(Golgi membrane)|GO:0005198(structural molecule activity)|GO:0005515(protein binding)|GO:0005737(cytoplasm)|GO:0005783(endoplasmic reticulum)|GO:0005792(microsome)|GO:0005793(endoplasmic reticulum-Golgi intermediate compartment)|GO:0005794(Golgi apparatus)|GO:0005798(Golgi-associated vesicle)|GO:0005886(plasma membrane)|GO:0006886(intracellular protein transport)|GO:0006890(retrograde vesicle-mediated transport, Golgi to ER)|GO:0006891(intra-Golgi vesicle-mediated transport)|GO:0016192(vesicle-mediated transport)|GO:0030117(membrane coat)|GO:0030126(COPI vesicle coat)|GO:0030137(COPI-coated vesicle)|GO:0031410(cytoplasmic vesicle)
TTCGTGCAAAAAGTCAGGGAATGGCCTTGAGCCTTGGAGATAAAATCAACCTGTCTCAAA
A_42_P455825
A_42_P455825
FALSE
FQ235342 Rn.17195
gb|FQ235342|gb|FQ214934|tc|TC609886|tc|TC638389
chr18:074586526-074586467
rn|18q12.3
Rattus norvegicus TL0AEA55YJ06 mRNA sequence. [FQ235342]
AAAGAGCCGAACCCCAATTCCTGTTGTCCCATATGTGTGTGATGTGACTTCCATGTGTAT
A_42_P455863
A_42_P455863
FALSE
NM_031570 NM_031570 29258 Rps7
ribosomal protein S7
Rn.224475
ENSRNOT00000011545
ref|NM_031570|ens|ENSRNOT00000011545|ens|ENSRNOT00000011333|ens|ENSRNOT00000059208
chr6:46515268-46515209
rn|6q16
Rattus norvegicus ribosomal protein S7 (Rps7), mRNA [NM_031570]
GO:0003674(molecular_function)|GO:0005634(nucleus)|GO:0005730(nucleolus)|GO:0005840(ribosome)|GO:0006364(rRNA processing)|GO:0008150(biological_process)|GO:0022627(cytosolic small ribosomal subunit)|GO:0030529(ribonucleoprotein complex)|GO:0042274(ribosomal small subunit biogenesis)
GTACCAGTTCCTCAGCTGAAATCTTTCCAGAAAATCCAAGTCCGGCTAGTTCGTGAATTG
A_42_P455886
A_42_P455886
FALSE
NM_001108376 NM_001108376 361038 RGD1308430
similar to 1700123O20Rik protein
Rn.2583
ENSRNOT00000049927
ref|NM_001108376|ens|ENSRNOT00000049927|gb|FQ213777|gb|BC158656
chr15:32768887-32768946
rn|15p13
Rattus norvegicus similar to 1700123O20Rik protein (RGD1308430), mRNA [NM_001108376]
TGTTGAGTGCTAACACTGTTGTACCCTGGCAGTACGTCACTTGGACTCTCTCCATTTTTA
A_42_P455982
A_42_P455982
FALSE
NM_001106007 NM_001106007 289632 Pgm2
phosphoglucomutase 2
Rn.203347
ENSRNOT00000002977
ref|NM_001106007|ens|ENSRNOT00000002977|gb|BC160893|tc|TC618711
chr14:46827422-46827363
rn|14p11
Rattus norvegicus phosphoglucomutase 2 (Pgm2), mRNA [NM_001106007]
GO:0000287(magnesium ion binding)|GO:0003674(molecular_function)|GO:0004614(phosphoglucomutase activity)|GO:0005575(cellular_component)|GO:0005829(cytosol)|GO:0005975(carbohydrate metabolic process)|GO:0006006(glucose metabolic process)|GO:0008150(biological_process)|GO:0019255(glucose 1-phosphate metabolic process)
GGTGCCATTGAAGAACATTTTTTCCAGCCACAAAAGTATAACCTACAGCCAAAAGCAGAA
A_42_P456155
A_42_P456155
FALSE
NM_001126097 NM_001126097 690848 Uqcr11
ubiquinol-cytochrome c reductase, complex III subunit XI
Rn.3254
ENSRNOT00000022747
ref|NM_001126097|ens|ENSRNOT00000022747|gb|FQ217927|gb|BC157815
chr7:10820937-10820996
rn|7q11
Rattus norvegicus ubiquinol-cytochrome c reductase, complex III subunit XI (Uqcr11), nuclear gene encoding mitochondrial protein, mRNA [NM_001126097]
GO:0008121(ubiquinol-cytochrome-c reductase activity)|GO:0009055(electron carrier activity)
TCTCCCTTGAGGATTTCCCAGCTCAAGAATCCTTTGAGCTCCCAACACTTGCATGTCGGG
A_42_P456277
A_42_P456277
FALSE
XM_002726483 XM_002726483 312678 Jarid1a
jumonji, AT rich interactive domain 1A (Rbp2 like)
Rn.224608
ENSRNOT00000056198
ens|ENSRNOT00000056198|ens|ENSRNOT00000034548|ref|XM_002726483|ref|XM_002729425
chr4:156740446-156745225
rn|4q42
Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:E9PSM3] [ENSRNOT00000056198]
AGATTCCCGTGGTGGAGAGAAAAATCCTGGATTTGTATGCTTTAAGCAAGATTGTTGCCA
41120 20904 Kbytes .Supplementary data files not provided
Less...
More...