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| Status |
Public on Feb 12, 2002 |
| Title |
ORF_intergenic_v1.0 |
| Technology type |
spotted DNA/cDNA |
| Distribution |
non-commercial |
| Organism |
Saccharomyces cerevisiae |
| |
|
| Description |
Tip Configuration: Standard 32-tip
Columns per Sector: 24
Column Spacing: 173
Row Spacing: 173
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| |
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| Submission date |
Feb 08, 2002 |
| Last update date |
Jan 18, 2013 |
| Organization |
Stanford Microarray Database (SMD) |
| E-mail(s) |
array@genome.stanford.edu
|
| Phone |
650-498-6012
|
| URL |
http://genome-www5.stanford.edu/
|
| Department |
Stanford University, School of Medicine
|
| Street address |
300 Pasteur Drive
|
| City |
Stanford |
| State/province |
CA |
| ZIP/Postal code |
94305 |
| Country |
USA |
| |
|
| Samples (29)
|
GSM943, GSM944, GSM945, GSM946, GSM75988, GSM75989
GSM75990, GSM75991, GSM75992, GSM75993, GSM75994, GSM75995, GSM75996, GSM75997, GSM75998, GSM75999, GSM76000, GSM76001, GSM76002, GSM76003, GSM76004, GSM76005, GSM76006, GSM76007, GSM76008, GSM76009, GSM76010, GSM76011, GSM76013
|
| Series (2) |
| GSE19 |
SBF-MBF genomic distribution |
| GSE3360 |
Rap1, Sir2, Sir3, Sir4 immunoprecipitations |
|
| Data table header descriptions |
| ID |
unique spot identifier |
| ORF |
ORF name |
| SPOT_ID |
Spot identifier |
| GENE_NAME |
gene name |
| CHROMOSOME |
chromosome number |
| STRAND |
genomic DNA strand upon which gene sequence is placed |
| BEG_COORD |
beginning coordinate of gene sequence on genomic DNA |
| END_COORD |
ending coordinate of gene sequence on genomic DNA |
| PROCESS |
gene process |
| FUNCTION |
gene function |
| DS_GENE_1 |
description |
| DS_GENE_2 |
description |
| SECTOR |
sector of spot print location |
| SECTORROW |
sector row of spot print location |
| SECTORCOL |
sector column of spot print location |
| PLATE |
clone plate number |
| PROW |
clone plate row |
| PCOL |
clone plate column |
| FAILED |
failed |
| IS_CONTAMINATED |
contaminated |
| Data table |
| ID |
ORF |
SPOT_ID |
GENE_NAME |
CHROMOSOME |
STRAND |
BEG_COORD |
END_COORD |
PROCESS |
FUNCTION |
DS_GENE_1 |
DS_GENE_2 |
SECTOR |
SECTORROW |
SECTORCOL |
PLATE |
PROW |
PCOL |
FAILED |
IS_CONTAMINATED |
| 1 |
|
GENOMIC 1X |
GENOMIC 1X |
|
|
|
|
|
|
|
|
1 |
1 |
1 |
1 |
A |
1 |
0 |
U |
| 2 |
|
3XSSC |
3XSSC |
|
|
|
|
|
|
|
|
1 |
1 |
2 |
1 |
A |
5 |
0 |
U |
| 3 |
|
GENOMIC 0.5X |
GENOMIC 0.5X |
|
|
|
|
|
|
|
|
1 |
1 |
3 |
1 |
A |
9 |
0 |
U |
| 4 |
|
3XSSC |
3XSSC |
|
|
|
|
|
|
|
|
1 |
1 |
4 |
1 |
A |
13 |
0 |
U |
| 5 |
|
GENOMIC 0.25X |
GENOMIC 0.25X |
|
|
|
|
|
|
|
|
1 |
1 |
5 |
1 |
A |
17 |
0 |
U |
| 6 |
|
3XSSC |
3XSSC |
|
|
|
|
|
|
|
|
1 |
1 |
6 |
1 |
A |
21 |
0 |
U |
| 7 |
|
EMPTY |
EMPTY |
|
|
|
|
|
|
|
|
1 |
1 |
7 |
1 |
I |
1 |
0 |
U |
| 8 |
|
EMPTY |
EMPTY |
|
|
|
|
|
|
|
|
1 |
1 |
8 |
1 |
I |
5 |
0 |
U |
| 9 |
|
EMPTY |
EMPTY |
|
|
|
|
|
|
|
|
1 |
1 |
9 |
1 |
I |
9 |
0 |
U |
| 10 |
|
EMPTY |
EMPTY |
|
|
|
|
|
|
|
|
1 |
1 |
10 |
1 |
I |
13 |
0 |
U |
| 11 |
|
EMPTY |
EMPTY |
|
|
|
|
|
|
|
|
1 |
1 |
11 |
1 |
I |
17 |
0 |
U |
| 12 |
|
EMPTY |
EMPTY |
|
|
|
|
|
|
|
|
1 |
1 |
12 |
1 |
I |
21 |
0 |
U |
| 13 |
YAL001C |
|
TFC3 |
1 |
C |
151163 |
147591 |
transcription initiation from Pol III promoter |
RNA polymerase III transcription factor |
YAR002W (NUP60) |
|
1 |
1 |
13 |
2 |
A |
1 |
1 |
U |
| 14 |
YAL003W |
|
EFB1 |
1 |
W |
142172 |
143158 |
protein synthesis elongation |
translation elongation factor |
YAL005C (SSA1) |
YAL002W (VPS8) |
1 |
1 |
14 |
2 |
A |
5 |
0 |
U |
| 15 |
YAL005C |
|
SSA1 |
1 |
C |
141429 |
139501 |
protein folding* |
adenosinetriphosphatase* |
YAL007C (ERP2) |
YAL003W (EFB1) |
1 |
1 |
15 |
2 |
A |
9 |
0 |
U |
| 16 |
YAL008W |
|
FUN14 |
1 |
W |
136912 |
137508 |
biological_process unknown |
molecular_function unknown |
|
|
1 |
1 |
16 |
2 |
A |
13 |
0 |
U |
| 17 |
YAL010C |
|
MDM10 |
1 |
C |
135663 |
134182 |
mitochondrion inheritance* |
molecular_function unknown |
YAL009W (SPO7) |
|
1 |
1 |
17 |
2 |
A |
17 |
0 |
U |
| 18 |
YAL012W |
|
CYS3 |
1 |
W |
130798 |
131982 |
|
cystathionine-gamma-lyase |
YAL011W |
|
1 |
1 |
18 |
2 |
A |
21 |
0 |
U |
| 19 |
YBL087C |
|
RPL23A |
2 |
C |
60732 |
59815 |
protein biosynthesis |
structural protein of ribosome |
YBL088C (TEL1) |
|
1 |
1 |
19 |
2 |
I |
1 |
0 |
U |
| 20 |
YBL089W |
|
|
2 |
W |
49418 |
50947 |
biological_process unknown |
|
|
|
1 |
1 |
20 |
2 |
I |
5 |
0 |
U |
Total number of rows: 16128
Table truncated, full table size 1365 Kbytes.
| Supplementary data files not provided |
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