NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Platform GPL7656 Query DataSets for GPL7656
Status Public on Sep 22, 2009
Title Mouse Exonic Evidence Based Oligonucleotide (MEEBO) spotted microarrays
Technology type spotted oligonucleotide
Distribution non-commercial
Organism Mus musculus
Manufacturer UCSF functional genomics core
Manufacture protocol 70mer
 
 
Citation(s) 19668367
Submission date Nov 18, 2008
Last update date Feb 17, 2015
Contact name Mark Klinger
E-mail(s) mark.klinger@ucsf.edu
Phone 415-502-5432
Organization name University of California, San Francisco
Department Microbiology and Immunology
Lab Nigel Killeen
Street address 513 Parnassus Avenue, Box0414
City San Francisco
State/province CA
ZIP/Postal code 94122
Country USA
 
Samples (36) GSM343477, GSM343478, GSM343479, GSM343480, GSM343481, GSM343482 
Series (3)
GSE13645 Transcriptional profiling of p56lck-deficient regulatory and memory T cells
GSE65977 Molecular characterization of Notch1 positive progenitor cells in the developing retina
GSE78062 Molecular profiling of the developing lacrimal gland

Data table header descriptions
ID
MEEBO_ID
LocusLink_ID Unique gene identifier
Description gene product description
Probe_Name MEEBO probe details
Gid Entrez Nucleotide ID
GB_LIST NCBI accession
GENOME_ACC NCBI accession of Genome sequence
ORF Gene symbol
SEQUENCE MEEBO probe nucleotide sequence
SPOT_ID

Data table
ID MEEBO_ID LocusLink_ID Description Probe_Name Gid GB_LIST GENOME_ACC ORF SEQUENCE SPOT_ID
1 mVI036862 Murine leukemia virus, complete genome. 9626958_321_rc | Murine leukemia virus 9626958 NC_001501 GCTGCAACTGCAAGAGGGTTTATTGGATACACGGGTACCCGGGCGACTCAGTCAATCGGAGGACTGGCGC MLVgp1
2 mVI036861 Murine osteosarcoma virus, complete genome. 9626984_5_rc | Murine osteosarcoma virus 9626984 NC_001506 GTCTCCGGATCCCGGACGAGCCCCCAAATGAAAGACCCCCAGGCTGGGCAGTCAATCACTCTGAGGAGAC Movgp1
3 mVI036860 Polyomavirus muris, complete genome. 9626978_151_rc | Murine polyomavirus 9626978 NC_001505 CTCCTGGAGGAGCTAATCAAAGATCAGCCCCTGACTGGATGCTCCCTTTACTTTTAGGGCTCTACGGAGA VP2
4 mVI036859 Polyomavirus muris, complete genome. 9626978_85_rc | Murine polyomavirus 9626978 NC_001505 GTTTCTTTTCTAAGTTCACCTTTACAGCTCCATCTAAATGATCTCTAAGATTATCAAGATTATTTATTCC VP2
5 mVI036858 Murid herpesvirus 4, complete genome. 9629553_1544 | Murid herpesvirus 4 9629553 NC_001826 CGTGGATCTTGGAGACGGTGGCGGTGGCGGCCTTAAACCAGGAAATGTTGTACCCGCGCTTGGTAGAGAC MuHV4gp81
6 mVI036857 Murine hepatitis virus, complete genome. 9629812_617_rc | Murine hepatitis virus 9629812 NC_001846 AACTACTAACAATACGCAGTATGTTTGGCATAGCACGATCACATTTAGGATAGTCCCAACCCATGAGTAC MHVgp9
7 mVI036856 Friend murine leukemia virus, complete genome. 9626096_7 | Friend murine leukemia virus 9626096 NC_001362 CTCGTCCGGGATCTGGAGACCCCTGCCCAGGGACCACCGACCCACCACCGGGAGGTAAGCTGGCCAGCAA FrMLVgp3
8 mVI036855 Moloney murine sarcoma virus, complete genome. 9626962_5 | Moloney murine sarcoma virus 9626962 NC_001502 TCATTTGGGGGCTCGTCCGGGATTTGGAGACCCCTGCCCAGGGACCACCGACCCACCACCGGGAGGTAAG MoMSVgp1
9 mVI036854 Mouse mammary tumor virus, complete genome. 9626965_214 | Mouse mammary tumor virus 9626965 NC_001503 AACAGCCGGACGAGGCTATGCTTGTGTTTTTCCACAGGATGCCGAAACACCAATCTGGGTCCCCGACCGA MMTVgp7
10 mVI036853 Hantaan virus gene for RNA-dependent RNA polymerase, complete cds. 436215_134_rc | Hantaan virus 436215 D25531 CAAACAAAAACCAGTCAGTCCCATCATCTACTGGTTCCAAGTATCCATAAATGAATAATGCATCATCAGA
11 mVI036852 Lactate dehydrogenase-elevating virus, complete genome. 10181072_418_rc | Lactate dehydrogenase-elevating virus 10181072 NC_002534 CGGGGACCAGAACTGGAGGGAGATATCTCGAGGTTACATGATGACATCCACCAACATTACTTCCCTTCAC LDVgp8
12 mVI036851 Rat cytomegalovirus, complete genome. 20198505_5605_rc | Rat cytomegalovirus 20198505 NC_002512 TGGCTCTCCAGCGCCTCGGTCTGGGTCGGCGACCCCACGCAGACGATGCAGGGCATGGCGCGACTCCGGT RcVgp167
13 mVI036850 Mouse cytomegalovirus 1, complete genome. 21716071_6081 | Mouse cytomegalovirus 1 21716071 NC_004065 TCGCCCACAACTGGGTCATGTTCATCAACAACAAGCGCTGCCTCGACCTCGAGTTCGGCGACCTGCTCAA
14 mVI036849 Murine adenovirus A, complete genome. 6446580_744_rc | Murine adenovirus A 6446580 NC_000942 ATAAAAGCCCTGATATCCGATGTTGTAGTTGGACAGCATTTGCACCAAAAACCAGTCCTTAGTCATGTTA MAdVAgp27
15 mVI036848 Murine polyomavirus strain A2, complete genome. 9627020_121_rc | Polyomavirus sp. 9627020 NC_001515 TGCAGGGCCAACCCATGGAAGGGGAGAACACCCAGGTAGAGGAGGTTAGAGTGTATGATGGGACTGAACC MPyVgp6
16 mVI036847 Lymphocytic choriomeningitis virus segment S, complete sequence. 23334588_104 | Lymphocytic choriomeningitis virus 23334588 NC_004294 GCAGCACCAAGACTAAAGTTATAGCCAGAAATGTTGATGCTGGACTGCTGTTCAGTGATGACCCCCAGAA LCMVsSgp2
17 mVI036846 Mammalian orthoreovirus 3 segment S4, complete sequence. 23309026_1_rc | Mammalian orthoreovirus 3 23309026 NC_004276 TCCACGACCTGATGACCGTTGGGCAAGCACACCTCCATTGCGACAACGTCTGGGAAGAGGCAAAAATAGC MoV3sS4gp1
18 mVI036845 Theilovirus, complete genome. 9626123_206_rc | Theilovirus 9626123 NC_001366 ACAAAAGACGGTGAAATCTTCACCATCGGGATTTTGTCCTAGATCATCCATAATCACAGAAAATTGATTT ThVgp1
19 mVI036844 Mice minute virus, complete genome. 9626993_62_rc | Mice minute virus 9626993 NC_001510 AGCTTCTTCTACCCAAATCAAGTTCTTGTTGGTACAGTCATTAAATGGAAAGTTTACATTGGCTGCATTA MMVgp3
20 mVI036843 Murine hepatitis virus, complete genome. 9629812_535 | Murine hepatitis virus 9629812 NC_001846 CCACTAATCAGGATTCTTATGGTGGTGCTTCCGTTTGTATATATTGCCGCTCGCGTGTTGAACATCCAGA MHVgp9

Total number of rows: 38976

Table truncated, full table size 6508 Kbytes.




Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp

Supplementary data files not provided
| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap