|
| Status |
Public on Jun 02, 2008 |
| Title |
Drosophila melanogaster small RNA sequence from 14 libraries |
| Organism |
Drosophila melanogaster |
| Experiment type |
Non-coding RNA profiling by high throughput sequencing
|
| Summary |
High-throughput sequencing of Drosophila melanogaster small RNAs.
total RNA, ~18-26nt RNAs isolated using PAGE, ligation to adapters requires 5' monophosphate and 3' OH
|
| |
|
| Overall design |
Small RNAs were sequenced from D. melanogaster heads (male and female), body (male and female), S2 and Kc cells and different stages of embryo. Raw sequences were clipped by 3' linker sequences recognition, and select clipped sequences longer than 18 nt
|
| |
|
| Contributor(s) |
Lai EC |
| Citation(s) |
18501606 |
| |
| Submission date |
May 30, 2008 |
| Last update date |
May 15, 2019 |
| Contact name |
Wei-Jen Chung |
| Phone |
212-6395549
|
| Organization name |
Sloan-Kettering Institute
|
| Department |
Developmental Biology
|
| Lab |
Lai
|
| Street address |
430 E 67th St
|
| City |
New York |
| State/province |
NY |
| ZIP/Postal code |
10021 |
| Country |
USA |
| |
|
| Platforms (1) |
| GPL9058 |
Illumina Genome Analyzer (Drosophila melanogaster) |
|
| Samples (14)
|
|
| Relations |
| SRA |
SRP003879 |
| BioProject |
PRJNA106137 |
| SRA |
SRP003801 |
| SRA |
SRP003876 |
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