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Series GSE16715 Query DataSets for GSE16715
Status Public on Jan 31, 2011
Title Expression profiling in Williams-Beuren Syndrome patient fibroblast cell lines
Organism Homo sapiens
Experiment type Expression profiling by array
Summary Williams-Beuren Syndrome (WBS) is a neurodevelopmental disorder caused by aa 1.5 Mb microdeletion on human chromosome 7. Although the molecular cause of the disorder is well-established, little is known about the global impact of the deletion on gene expression. Here we profiled the transcriptomes of fibroblast cell lines from 8 young girls with WBS, and 9 sex- and age-matched control individuals

Keywords: disease state analysis, gene expression profiling
 
Overall design Skin fibroblast of 8 WBS and 9 control individuals were obtained from the cell culture collections of the “Centre de Biotechnologie Cellulaire, Hospices Civils de Lyon, Hôpital Debrousse”, Lyon, France. Appropriate informed consent was obtained for each sample by the physicians in charge. Human skin fibroblasts were grown in HAM F-10, supplemented with 10% fetal bovine serum and 1% antibiotics (Invitrogen). Total RNA was prepared using TriZOL Reagent (Invitrogen) and RNeasy Mini Columns (Qiagen) according to the manufacturers’ instructions.
 
Contributor(s) Henrichsen CN, Csardi G, Zabot M, Bergmann S, Merla G, Reymond A
Citation(s) 21304579
Submission date Jun 19, 2009
Last update date Mar 25, 2019
Contact name Charlotte N. Henrichsen
Organization name University of Lausanne
Department Center for Integrative Genomics
Street address Quartier Sorge
City Lausanne
ZIP/Postal code CH-1015
Country Switzerland
 
Platforms (1)
GPL570 [HG-U133_Plus_2] Affymetrix Human Genome U133 Plus 2.0 Array
Samples (17)
GSM418744 1104_CNTL
GSM418745 2433_CNTL
GSM418746 5042_CNTL
Relations
BioProject PRJNA117473

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE16715_RAW.tar 126.1 Mb (http)(custom) TAR (of CEL)
Processed data included within Sample table

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