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Series GSE17593 Query DataSets for GSE17593
Status Public on Feb 01, 2010
Title Melanoma short-term cultures and cell lines: expression profiling and CNV analyses
Organism Homo sapiens
Experiment type Expression profiling by array
Genome variation profiling by SNP array
Expression profiling by high throughput sequencing
Summary This SuperSeries is composed of the SubSeries listed below.
 
Overall design Refer to individual Series
 
Citation(s) 20179022
Submission date Aug 11, 2009
Last update date May 15, 2019
Contact name Michael Berger
E-mail(s) berger@broadinstitute.org
Organization name The Broad Instititute
Department Cancer Program
Street address 7 Cambridge Center
City Cambridge
State/province MA
ZIP/Postal code 02142
Country USA
 
Platforms (3)
GPL5175 [HuEx-1_0-st] Affymetrix Human Exon 1.0 ST Array [transcript (gene) version]
GPL6801 [GenomeWideSNP_6] Affymetrix Genome-Wide Human SNP 6.0 Array
GPL9115 Illumina Genome Analyzer II (Homo sapiens)
Samples (41)
GSM433776 melanoma cell line 501Mel
GSM433777 melanoma short-term culture M000216
GSM433778 melanoma short-term culture M000921
This SuperSeries is composed of the following SubSeries:
GSE17349 Expression data for melanoma short-term cultures and cell lines
GSE17359 Affymetrix SNP array data for melanoma short-term cultures and cell lines
GSE20156 RNA-Seq of melanoma short-term cultures and cell lines
Relations
BioProject PRJNA118501

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE17593_RAW.tar 6.7 Gb (http)(custom) TAR (of BAM, CEL)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data included within Sample table
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