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GEO accession:
Series GSE17593
Query DataSets for GSE17593
Status
Public on Feb 01, 2010
Title
Melanoma short-term cultures and cell lines: expression profiling and CNV analyses
Organism
Homo sapiens
Experiment type
Expression profiling by array
Genome variation profiling by SNP array
Expression profiling by high throughput sequencing
Summary
This SuperSeries is composed of the SubSeries listed below.
Overall design
Refer to individual Series
Citation(s)
20179022
Submission date
Aug 11, 2009
Last update date
May 15, 2019
Contact name
Michael Berger
E-mail(s)
berger@broadinstitute.org
Organization name
The Broad Instititute
Department
Cancer Program
Street address
7 Cambridge Center
City
Cambridge
State/province
MA
ZIP/Postal code
02142
Country
USA
Platforms (3)
GPL5175
[HuEx-1_0-st] Affymetrix Human Exon 1.0 ST Array [transcript (gene) version]
GPL6801
[GenomeWideSNP_6] Affymetrix Genome-Wide Human SNP 6.0 Array
GPL9115
Illumina Genome Analyzer II (Homo sapiens)
Samples (41)
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More...
GSM433776
melanoma cell line 501Mel
GSM433777
melanoma short-term culture M000216
GSM433778
melanoma short-term culture M000921
GSM433779
melanoma short-term culture M010403
GSM433780
melanoma short-term culture M970109
GSM433781
melanoma short-term culture M980409
GSM433782
melanoma short-term culture M980928
GSM433783
melanoma short-term culture M990514
GSM433784
melanoma short-term culture M990802
GSM433916
melanoma short-term culture M000921
GSM433917
melanoma short-term culture M990802
GSM433918
melanoma cell line 501Mel
GSM433919
HapMap normal cell line NA18504
GSM433920
HapMap normal cell line NA18508
GSM433921
HapMap normal cell line NA18517
GSM433922
HapMap normal cell line NA18857
GSM433923
HapMap normal cell line NA18863
GSM433924
HapMap normal cell line NA18870
GSM433925
HapMap normal cell line NA18871
GSM433926
HapMap normal cell line NA18912
GSM433927
HapMap normal cell line NA19099
GSM433928
HapMap normal cell line NA19137
GSM433929
HapMap normal cell line NA19142
GSM433930
HapMap normal cell line NA19143
GSM433931
HapMap normal cell line NA19153
GSM433932
HapMap normal cell line NA19194
GSM433933
HapMap normal cell line NA12144
GSM506401
melanoma cell line MeWo
GSM506402
melanoma cell line MeWo (replicate 1)
GSM506403
melanoma cell line MeWo (replicate 2)
GSM506404
melanoma cell line 501 Mel
GSM506405
melanoma short-term culture M000216
GSM506406
melanoma short-term culture M000921
GSM506407
melanoma short-term culture M010403
GSM506408
melanoma short-term culture M970109
GSM506409
melanoma short-term culture M980409
GSM506410
melanoma short-term culture M980928
GSM506411
melanoma short-term culture M990514
GSM506412
melanoma short-term culture M990802
GSM506413
leukemia cell line K-562 (K-562-4)
GSM506414
leukemia cell line K-562 (K-562-3)
This SuperSeries is composed of the following SubSeries:
GSE17349
Expression data for melanoma short-term cultures and cell lines
GSE17359
Affymetrix SNP array data for melanoma short-term cultures and cell lines
GSE20156
RNA-Seq of melanoma short-term cultures and cell lines
Relations
BioProject
PRJNA118501
Download family
Format
SOFT formatted family file(s)
SOFT
MINiML formatted family file(s)
MINiML
Series Matrix File(s)
TXT
Supplementary file
Size
Download
File type/resource
GSE17593_RAW.tar
6.7 Gb
(http)
(custom)
TAR (of BAM, CEL)
SRA Run Selector
Raw data are available in SRA
Processed data included within Sample table
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