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Series GSE212358 Query DataSets for GSE212358
Status Public on Apr 25, 2023
Title A global survey of phytoviral RNA 3' uridylation identifies extreme variations and virus-specific patterns
Organisms Spinacia oleracea; Arabidopsis thaliana; Nicotiana benthamiana; Vitis vinifera; Chenopodium quinoa; Nicotiana obtusifolia
Experiment type Expression profiling by high throughput sequencing
Summary This SuperSeries is composed of the SubSeries listed below.
 
Overall design Refer to individual Series
Web link https://academic.oup.com/plphys/advance-article/doi/10.1093/plphys/kiad278/7161382
 
Citation(s) 37177985
Submission date Aug 30, 2022
Last update date Jul 27, 2023
Contact name Dominique Gagliardi
E-mail(s) dominique.gagliardi@ibmp-cnrs.unistra.fr
Organization name CNRS
Department IBMP
Street address 12, rue du General Zimmer
City Strasbourg
ZIP/Postal code 67084
Country France
 
Platforms (12)
GPL17970 Illumina MiSeq (Arabidopsis thaliana)
GPL22072 Illumina MiSeq (Nicotiana benthamiana)
GPL29591 Illumina MiSeq (Vitis vinifera)
Samples (140)
GSM6523447 Non polyadenylated virus biol rep 1
GSM6523448 Non polyadenylated virus biol rep 2
GSM6523449 Non polyadenylated virus biol rep 3
This SuperSeries is composed of the following SubSeries:
GSE212292 Diversity of phytoviral RNA U-tailing among ss(+) RNA phytoviruses
GSE212293 Involvement of Arabidopsis TUTases in viral RNA uridylation
GSE212354 RNA uridylation percentages for virus of the Secoviridae family
Relations
BioProject PRJNA875106

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary data files not provided
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