|
| Status |
Public on Dec 11, 2010 |
| Title |
Hodgkin lymphoma |
| Organism |
Homo sapiens |
| Experiment type |
Expression profiling by array
Genome variation profiling by SNP array
|
| Summary |
This SuperSeries is composed of the SubSeries listed below.
|
| |
|
| Overall design |
Refer to individual Series
*** This submission represents the microarray gene expression and microarray copy number components of the study
|
| |
|
| Citation(s) |
21368758 |
| Submission date |
Dec 10, 2010 |
| Last update date |
Mar 25, 2019 |
| Contact name |
Christian Steidl |
| E-mail(s) |
csteidl@bccancer.bc.ca
|
| Phone |
1-604-675-8046
|
| Organization name |
BC Cancer Agency
|
| Department |
Pathology
|
| Lab |
Steidl lab
|
| Street address |
675 West 10th Avenue
|
| City |
Vancouver |
| State/province |
BC |
| ZIP/Postal code |
V5Z 1L3 |
| Country |
Canada |
| |
|
| Platforms (2) |
| GPL570 |
[HG-U133_Plus_2] Affymetrix Human Genome U133 Plus 2.0 Array |
| GPL6801 |
[GenomeWideSNP_6] Affymetrix Genome-Wide Human SNP 6.0 Array |
|
| Samples (16)
|
| GSM637954 |
Microdissected germinal center, replicate 1 |
| GSM637955 |
Microdissected germinal center, replicate 2 |
| GSM637956 |
Microdissected germinal center, replicate 3 |
| GSM637957 |
Microdissected germinal center, replicate 4 |
| GSM637958 |
Microdissected germinal center, replicate 5 |
| GSM637959 |
Hodgkin lymphoma cell line KM-H2 |
| GSM637960 |
Hodgkin lymphoma cell line L-428 |
| GSM637961 |
Hodgkin lymphoma cell line L-540 |
| GSM637962 |
Hodgkin lymphoma cell line L-1236 |
| GSM637963 |
Hodgkin lymphoma cell line HDLM-2 |
| GSM637966 |
KM-H2 cells, Non-silencing control, replicate 1 |
| GSM637967 |
KM-H2 cells, Non-silencing control, replicate 2 |
| GSM637968 |
KM-H2 cells, CIITA-BX648577 knockdown, replicate 1 |
| GSM637969 |
KM-H2 cells, CIITA-BX648577 knockdown, replicate 2 |
| GSM637987 |
KM-H2 |
| GSM637988 |
L-428 |
|
| This SuperSeries is composed of the following SubSeries: |
| GSE25986 |
Gene expression profiling of cell lines derived from classical Hodgkin lymphoma |
| GSE25987 |
Gene expression profiling of Hodgkin lymphoma cell line KMH2: Comparison of CIITA-BX648577 knockdown cultures with non-silencing controls |
| GSE25989 |
Copy number analysis of Hodgkin lymphoma cell lines KM-H2 and L-428 |
|
| Relations |
| BioProject |
PRJNA135417 |
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