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Series GSE31783 Query DataSets for GSE31783
Status Public on Oct 30, 2012
Title rem-1 analysis in C. elegans
Organism Caenorhabditis elegans
Experiment type Non-coding RNA profiling by high throughput sequencing
Summary small RNA libraries from total RNA isolated from young adult animals
 
Overall design Wild-type and rem-1 mutant animals were used for RNA isolation. Regular libraries were made using adaptor ligations at both ends. In addition, librraies were made from oxidised and TAP treated RNA.
 
Contributor(s) Berezikov E, Ketting RF
Citation(s) 22829772
Submission date Aug 31, 2011
Last update date May 15, 2019
Contact name Eugene Berezikov
E-mail(s) e.berezikov@umcg.nl
Phone +31 50 361 73 00
Organization name University Medical Center Groningen
Department European Research Institute for the Biology of Ageing
Street address Antonius Deusinglaan 1
City Groningen
ZIP/Postal code 9713AV
Country Netherlands
 
Platforms (1)
GPL9269 Illumina Genome Analyzer II (Caenorhabditis elegans)
Samples (8)
GSM788484 WT
GSM788485 WT ox
GSM788486 WT TAP
Relations
SRA SRP008008
BioProject PRJNA145295

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE31783_RAW.tar 23.4 Mb (http)(custom) TAR (of TXT)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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