|
| Status |
Public on Aug 06, 2016 |
| Title |
Identification of the PhoB regulon and role of PhoU in the phosphate-starvation response of Caulobacter crescentus |
| Organism |
Caulobacter vibrioides NA1000 |
| Experiment type |
Genome binding/occupancy profiling by high throughput sequencing
Expression profiling by array
|
| Summary |
This SuperSeries is composed of the SubSeries listed below.
|
| |
|
| Overall design |
Refer to individual Series
|
| |
|
| Citation missing |
Has this study been published? Please login to update or notify GEO. |
| |
| Submission date |
Aug 11, 2015 |
| Last update date |
May 15, 2019 |
| Contact name |
Michael Laub |
| Organization name |
MIT
|
| Street address |
31 Ames St
|
| City |
Cambridge |
| State/province |
MA |
| ZIP/Postal code |
02142 |
| Country |
USA |
| |
|
| Platforms (2) |
| GPL15487 |
Agilent-032577 Custom Caulobacter crescentus NA1000 15k array |
| GPL20784 |
Illumina MiSeq (Caulobacter crescentus NA1000) |
|
| Samples (16)
|
| GSM1846939 |
ΔphoU;Pvan-phoU -vanillate/+vanillate 2 hours depletion rep 1 |
| GSM1846940 |
ΔphoU;Pvan-phoU -vanillate/+vanillate 2 hours depletion rep 2 |
| GSM1846941 |
ΔphoU;Pvan-phoU -vanillate/+vanillate 5 hours depletion rep 1 |
| GSM1846942 |
ΔphoU;Pvan-phoU -vanillate/+vanillate 5 hours depletion rep 2 |
| GSM1846943 |
ΔphoU;Pvan-phoU -vanillate/+vanillate 7 hours depletion rep 1 |
| GSM1846944 |
ΔphoU;Pvan-phoU -vanillate/+vanillate 7 hours depletion rep 2 |
| GSM1846945 |
ΔphoU;Pvan-phoU -vanillate/+vanillate 16 hours depletion rep 1 |
| GSM1846946 |
pstS::Tn5;ΔphoU;Pvan-phoU -vanillate/+vanillate 2 hours depletion rep 1 |
| GSM1846947 |
pstS::Tn5;ΔphoU;Pvan-phoU -vanillate/+vanillate 7 hours depletion rep 1 |
| GSM1846948 |
pstS::Tn5;ΔphoU;Pvan-phoU -vanillate/+vanillate 16 hours depletion rep 1 |
| GSM1847005 |
PYE_control |
| GSM1847006 |
PYE_treat |
| GSM1847007 |
M5G_control |
| GSM1847008 |
M5G_treat |
| GSM1847009 |
pstS_PYE_control |
| GSM1847010 |
pstS_PYE_treat |
|
| This SuperSeries is composed of the following SubSeries: |
| GSE71857 |
Identification of the PhoB regulon and role of PhoU in the phosphate-starvation response of Caulobacter crescentus (expression) |
| GSE71860 |
Identification of the PhoB regulon and role of PhoU in the phosphate-starvation response of Caulobacter crescentus (ChIP-seq) |
|
| Relations |
| BioProject |
PRJNA292616 |
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