NCBI C++ ToolKit
Public Member Functions | Protected Types | Protected Member Functions | Protected Attributes | List of all members
CBLASTToolManager Class Reference

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CBLASTToolManager. More...

#include <gui/packages/pkg_alignment/blast_tool_manager.hpp>

+ Inheritance diagram for CBLASTToolManager:
+ Collaboration diagram for CBLASTToolManager:

Public Member Functions

 CBLASTToolManager ()
 CBLASTToolManager. More...
 
IUIToolManager interface implementation
virtual void SetServiceLocator (IServiceLocator *srv_locator)
 Sets / unsets Service Locator. More...
 
virtual void SetParentWindow (wxWindow *parent)
 
virtual const IUIObjectGetDescriptor () const
 Returns the object describing this tool (UI meta data). More...
 
virtual void InitUI ()
 Initializes the Manager before using it in UI. More...
 
virtual void CleanUI ()
 CleanUI() is called after the host finished using the manager. More...
 
virtual wxPanel * GetMaxPanel ()
 Return the panel that occupies max size on display, to calculate dialog window size. More...
 
virtual wxPanel * GetCurrentPanel ()
 Return the panel corresponding to the current state of Tool Manager. More...
 
virtual bool CanDo (EAction action)
 Indicates whether given transition is possible in the current state. More...
 
virtual bool IsFinalState ()
 True if Tool Manager has reached its final state, i.e. More...
 
virtual bool IsCompletedState ()
 Manager goes into "Complete" state when "Finish" button is pressed and all input data is gatherred and validated. More...
 
virtual bool DoTransition (EAction action)
 Performs transition if possible and returns true, otherwise the function shall warn the user about the problem preventing the transition (such as insufficient or invalid input) and return false. More...
 
virtual IAppTaskGetTask ()
 Once parameters are gathered and validated this function is called to produce the final Task object that will be executed to do the actual computational work. More...
 
virtual void RestoreDefaults ()
 Restores the default options for the current panel. More...
 
IUIAlgoToolManager interface implementation
virtual string GetCategory ()
 returns the name for the ToolCategory to which the tool belongs. More...
 
virtual string SetInputObjects (const vector< TConstScopedObjects > &input)
 sets input objects that can be used as arguments for the tool. More...
 
virtual bool CanQuickLaunch () const
 
virtual IAppTaskQuickLaunch ()
 
IExtension interface implementation
virtual string GetExtensionIdentifier () const
 returns the unique human-readable identifier for the extension the id should use lowercase letters separated by underscores - "like_this" More...
 
virtual string GetExtensionLabel () const
 returns a displayable label for this extension ( please capitalize the key words - "My Extension" ) More...
 
IRegSettings interface implementation
virtual void SetRegistryPath (const string &path)
 
virtual void LoadSettings ()
 
virtual void SaveSettings () const
 
- Public Member Functions inherited from CObject
 CObject (void)
 Constructor. More...
 
 CObject (const CObject &src)
 Copy constructor. More...
 
virtual ~CObject (void)
 Destructor. More...
 
CObjectoperator= (const CObject &src) THROWS_NONE
 Assignment operator. More...
 
bool CanBeDeleted (void) const THROWS_NONE
 Check if object can be deleted. More...
 
bool IsAllocatedInPool (void) const THROWS_NONE
 Check if object is allocated in memory pool (not system heap) More...
 
bool Referenced (void) const THROWS_NONE
 Check if object is referenced. More...
 
bool ReferencedOnlyOnce (void) const THROWS_NONE
 Check if object is referenced only once. More...
 
void AddReference (void) const
 Add reference to object. More...
 
void RemoveReference (void) const
 Remove reference to object. More...
 
void ReleaseReference (void) const
 Remove reference without deleting object. More...
 
virtual void DoNotDeleteThisObject (void)
 Mark this object as not allocated in heap – do not delete this object. More...
 
virtual void DoDeleteThisObject (void)
 Mark this object as allocated in heap – object can be deleted. More...
 
void * operator new (size_t size)
 Define new operator for memory allocation. More...
 
void * operator new[] (size_t size)
 Define new[] operator for 'array' memory allocation. More...
 
void operator delete (void *ptr)
 Define delete operator for memory deallocation. More...
 
void operator delete[] (void *ptr)
 Define delete[] operator for memory deallocation. More...
 
void * operator new (size_t size, void *place)
 Define new operator. More...
 
void operator delete (void *ptr, void *place)
 Define delete operator. More...
 
void * operator new (size_t size, CObjectMemoryPool *place)
 Define new operator using memory pool. More...
 
void operator delete (void *ptr, CObjectMemoryPool *place)
 Define delete operator. More...
 
virtual void DebugDump (CDebugDumpContext ddc, unsigned int depth) const
 Define method for dumping debug information. More...
 
- Public Member Functions inherited from CDebugDumpable
 CDebugDumpable (void)
 
virtual ~CDebugDumpable (void)
 
void DebugDumpText (ostream &out, const string &bundle, unsigned int depth) const
 
void DebugDumpFormat (CDebugDumpFormatter &ddf, const string &bundle, unsigned int depth) const
 
void DumpToConsole (void) const
 
- Public Member Functions inherited from IUIToolManager
virtual IUIToolManagerGetAlternateToolManager ()
 If a transition fails, it may make sense to switch to a different tool manger When a tool manager identifies a more appropriate manager for a task, it returns it here, otherwise NULL. More...
 
virtual IExecuteUnitGetExecuteUnit ()
 
virtual IWizardPageGetFirstPage ()
 Returns first options page (if any) of the tool to be shown in wizard dialog. More...
 
virtual IWizardPageGetOptionsPage ()
 Returns page for tool options (long wizard path via "Options" button) More...
 
virtual void SetPrevPage (IWizardPage *)
 Sets a wizard page which should show before the first page of the tool. More...
 
virtual void SetNextPage (IWizardPage *)
 Sets a wizard page which should show after the last page of the tool. More...
 
virtual void ResetState ()
 
virtual bool UsesSingleOMScope ()
 
virtual ~IUIToolManager ()
 
- Public Member Functions inherited from IExtension
virtual ~IExtension ()
 
- Public Member Functions inherited from IRegSettings
virtual ~IRegSettings ()
 

Protected Types

enum  EState { eInvalid = -1 , eOptions , eParams , eCompleted }
 

Protected Member Functions

CRef< CNetBLASTUIDataSourceGetBLASTDataSource ()
 
virtual void x_SelectCompatibleInputObjects ()
 
virtual bool x_IsNucInput () const
 defines whether Nucleotide or Protein options shall be selected by default More...
 
virtual void x_CreateOptionsPanelIfNeeded ()
 
virtual bool x_CreateParamsPanelIfNeeded ()
 
void x_InitProjectParams ()
 
bool x_ValidateParams ()
 validate parameters after Params page More...
 
- Protected Member Functions inherited from CObject
virtual void DeleteThis (void)
 Virtual method "deleting" this object. More...
 

Protected Attributes

CUIObject m_Descriptor
 describes the Manager's UI properties More...
 
IServiceLocatorm_SrvLocator
 
wxWindow * m_ParentWindow
 
string m_RegPath
 
string m_LocalWinMaskDirPath
 
vector< TConstScopedObjectsm_InputObjects
 
map< string, TConstScopedObjectsm_NucObjects
 
map< string, TConstScopedObjectsm_ProtObjects
 
bool m_UseNucForMixInput
 
CBLASTParams m_Params
 
EState m_State
 
CBLASTSearchOptionsPanelm_OptionsPanel
 
CBLASTSearchParamsPanelm_ParamsPanel
 
SProjectSelectorParams m_ProjectParams
 

Additional Inherited Members

- Public Types inherited from CObject
enum  EAllocFillMode { eAllocFillNone = 1 , eAllocFillZero , eAllocFillPattern }
 Control filling of newly allocated memory. More...
 
typedef CObjectCounterLocker TLockerType
 Default locker type for CRef. More...
 
typedef atomic< Uint8TCounter
 Counter type is CAtomiCounter. More...
 
typedef Uint8 TCount
 Alias for value type of counter. More...
 
- Public Types inherited from IUIToolManager
enum  EAction { eBack = 0 , eNext , eSkip }
 
- Static Public Member Functions inherited from CObject
static NCBI_XNCBI_EXPORT void ThrowNullPointerException (void)
 Define method to throw null pointer exception. More...
 
static NCBI_XNCBI_EXPORT void ThrowNullPointerException (const type_info &type)
 
static EAllocFillMode GetAllocFillMode (void)
 
static void SetAllocFillMode (EAllocFillMode mode)
 
static void SetAllocFillMode (const string &value)
 Set mode from configuration parameter value. More...
 
- Static Public Member Functions inherited from CDebugDumpable
static void EnableDebugDump (bool on)
 
- Static Public Attributes inherited from CObject
static const TCount eCounterBitsCanBeDeleted = 1 << 0
 Define possible object states. More...
 
static const TCount eCounterBitsInPlainHeap = 1 << 1
 Heap signature was found. More...
 
static const TCount eCounterBitsPlaceMask
 Mask for 'in heap' state flags. More...
 
static const int eCounterStep = 1 << 2
 Skip over the "in heap" bits. More...
 
static const TCount eCounterValid = TCount(1) << (sizeof(TCount) * 8 - 2)
 Minimal value for valid objects (reference counter is zero) Must be a single bit value. More...
 
static const TCount eCounterStateMask
 Valid object, and object in heap. More...
 

Detailed Description

CBLASTToolManager.

Definition at line 64 of file blast_tool_manager.hpp.


The documentation for this class was generated from the following files:
Modified on Wed Apr 17 13:08:27 2024 by modify_doxy.py rev. 669887