GSE129425[Accession] - GEO DataSets - NCBI

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Items: 19

Select item 2001294251.

Impact of genome architecture upon the functional activation and repression of Hox regulatory landscapes [ChIP-seq]

(Submitter supplied) The spatial organization of the mammalian genome is complex and relies upon the formation of chromatin domains of various scales. At the level of gene regulation in cis, collections of enhancer sequences define large regulatory landscapes that usually match with the presence of topologically associating domains (TADs). These domains are largely determined by bound CTCF molecules and often contain ranges of enhancers displaying similar or related tissue specificity, suggesting that in some cases such domains may act as coherent regulatory units, with a global on or off state. more...

Organism:: Mus musculus

Type:: Genome binding/occupancy profiling by high throughput sequencing

Platforms:: GPL21103 GPL17021
16 Samples

Download data: BEDGRAPH

Series

Accession:: GSE129425

ID:: 200129425

PubMed Full text in PMC Similar studies SRA Run Selector

Select item 1000211032.

Illumina HiSeq 4000 (Mus musculus)

Organism:: Mus musculus

6393 Series
138815 Samples

Platform

Accession:: GPL21103

ID:: 100021103

Select item 1000170213.

Illumina HiSeq 2500 (Mus musculus)

Organism:: Mus musculus

10862 Series
295198 Samples

Platform

Accession:: GPL17021

ID:: 100017021

Select item 3037127454.

E12_PFL_Wt_EZH2_ChIP-seq

Organism:: Mus musculus

Source name:: Proximal forelimb mouse E12.5 Wild type EZH2 ChIPmentation

Platform:: GPL21103
Series:: GSE129425 GSE129427

Download data: BEDGRAPH

Sample

Accession:: GSM3712745

ID:: 303712745

SRA Run Selector

Select item 3037127445.

E12_DFL_Wt_EZH2_ChIP-seq

Organism:: Mus musculus

Source name:: Distal forelimb mouse E12.5 Wild type EZH2 ChIPmentation

Platform:: GPL21103
Series:: GSE129425 GSE129427

Download data: BEDGRAPH

Sample

Accession:: GSM3712744

ID:: 303712744

SRA Run Selector

Select item 3037127436.

E12_PFL_delattP-Rel5_H3K27ac_ChIP-seq

Organism:: Mus musculus

Source name:: Proximal forelimb mouse E12.5 delHoxd(attP-Rel5)d9lac H3K27ac ChIP-seq

Platform:: GPL21103
Series:: GSE129425 GSE129427

Download data: BEDGRAPH

Sample

Accession:: GSM3712743

ID:: 303712743

SRA Run Selector

Select item 3037127427.

E12_DFL_delattP-Rel5_H3K27ac_ChIP-seq

Organism:: Mus musculus

Source name:: Distal forelimb mouse E12.5 delHoxd(attP-Rel5)d9lac H3K27ac ChIP-seq

Platform:: GPL21103
Series:: GSE129425 GSE129427

Download data: BEDGRAPH

Sample

Accession:: GSM3712742

ID:: 303712742

SRA Run Selector

Select item 3037127418.

E12_PFL_Wt_H3K27ac_ChIP-seq

Organism:: Mus musculus

Source name:: Proximal forelimb mouse E12.5 Wild type H3K27ac ChIP-seq

Platform:: GPL21103
Series:: GSE129425 GSE129427

Download data: BEDGRAPH

Sample

Accession:: GSM3712741

ID:: 303712741

SRA Run Selector

Select item 3037127409.

E12_DFL_Wt_H3K27ac_ChIP-seq

Organism:: Mus musculus

Source name:: Distal forelimb mouse E12.5 Wild type H3K27ac ChIP-seq

Platform:: GPL21103
Series:: GSE129425 GSE129427

Download data: BEDGRAPH

Sample

Accession:: GSM3712740

ID:: 303712740

SRA Run Selector

Select item 30371273910.

E12_PFL_invNsi-Itga6_H3K27me3_ChIP-seq

Organism:: Mus musculus

Source name:: Proximal forelimb mouse E12.5 invHoxd(TgHd11lacNsi-Itga6) H3K27me3 ChIPmentation

Platform:: GPL21103
Series:: GSE129425 GSE129427

Download data: BEDGRAPH

Sample

Accession:: GSM3712739

ID:: 303712739

SRA Run Selector

Select item 30371273811.

E12_DFL_invNsi-Itga6_H3K27me3_ChIP-seq

Organism:: Mus musculus

Source name:: Distal forelimb mouse E12.5 invHoxd(TgHd11lacNsi-Itga6) H3K27me3 ChIPmentation

Platform:: GPL21103
Series:: GSE129425 GSE129427

Download data: BEDGRAPH

Sample

Accession:: GSM3712738

ID:: 303712738

SRA Run Selector

Select item 30371273712.

E12_PFL_invattP-Itga6_H3K27me3_ChIP-seq

Organism:: Mus musculus

Source name:: Proximal forelimb mouse E12.5 invHoxd(attP-Itga6) H3K27me3 ChIPmentation

Platform:: GPL21103
Series:: GSE129425 GSE129427

Download data: BEDGRAPH

Sample

Accession:: GSM3712737

ID:: 303712737

SRA Run Selector

Select item 30371273613.

E12_DFL_invattP-Itga6_H3K27me3_ChIP-seq

Organism:: Mus musculus

Source name:: Distal forelimb mouse E12.5 invHoxd(attP-Itga6) H3K27me3 ChIPmentation

Platform:: GPL21103
Series:: GSE129425 GSE129427

Download data: BEDGRAPH

Sample

Accession:: GSM3712736

ID:: 303712736

SRA Run Selector

Select item 30371274714.

E12_PFL_Wt_RING1B_ChIP-seq

Organism:: Mus musculus

Source name:: Proximal forelimb mouse E12.5 Wild type RING1B ChIP-seq

Platform:: GPL17021
Series:: GSE129425 GSE129427

Download data: BEDGRAPH

Sample

Accession:: GSM3712747

ID:: 303712747

SRA Run Selector

Select item 30371274615.

E12_DFL_Wt_RING1B_ChIP-seq

Organism:: Mus musculus

Source name:: Distal forelimb mouse E12.5 Wild type RING1B ChIP-seq

Platform:: GPL17021
Series:: GSE129425 GSE129427

Download data: BEDGRAPH

Sample

Accession:: GSM3712746

ID:: 303712746

SRA Run Selector

Select item 30371273516.

E12_PFL_delattP-Rel5_H3K27me3_ChIP-seq

Organism:: Mus musculus

Source name:: Proximal forelimb mouse E12.5 delHoxd(attP-Rel5)d9lac H3K27me3 ChIPmentation

Platform:: GPL17021
Series:: GSE129425 GSE129427

Download data: BEDGRAPH

Sample

Accession:: GSM3712735

ID:: 303712735

SRA Run Selector

Select item 30371273417.

E12_DFL_delattP-Rel5_H3K27me3_ChIP-seq

Organism:: Mus musculus

Source name:: Distal forelimb mouse E12.5 delHoxd(attP-Rel5)d9lac H3K27me3 ChIPmentation

Platform:: GPL17021
Series:: GSE129425 GSE129427

Download data: BEDGRAPH

Sample

Accession:: GSM3712734

ID:: 303712734

SRA Run Selector

Select item 30371273318.

E12_PFL_Wt_H3K27me3_ChIP-seq

Organism:: Mus musculus

Source name:: Proximal forelimb mouse E12.5 Wild type H3K27me3 ChIPmentation

Platform:: GPL17021
Series:: GSE129425 GSE129427

Download data: BEDGRAPH

Sample

Accession:: GSM3712733

ID:: 303712733

SRA Run Selector

Select item 30371273219.

E12_DFL_Wt_H3K27me3_ChIP-seq

Organism:: Mus musculus

Source name:: Distal forelimb mouse E12.5 Wild type H3K27me3 ChIPmentation

Platform:: GPL17021
Series:: GSE129425 GSE129427

Download data: BEDGRAPH

Sample

Accession:: GSM3712732

ID:: 303712732

SRA Run Selector

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