GSE178954[Accession] - GEO DataSets - NCBI

Warning: The NCBI web site requires JavaScript to function. more...

Search results

Items: 8

Select item 2001789541.

The transcriptome of gadE, hdeA, or hdeD null strains compared to wild-type of E. coli under minimum medium conditions

(Submitter supplied) To compare transcriptional profiling of a gadE-, hdeA-, or hdeD- deficient strain to wild type in E. coli under minimum medium conditions. These genes are included in the GAD cluster genes, which are involved in the glutamic acid-dependent acid resistance (GAD) in E. coli. Goal was to determine the GadE, HdeA, or HdeD regulon in E. coli. Biological replicates: 2 replicates.

Organism:: Escherichia coli O157:H7 str. EDL933; Escherichia coli BW25113; Escherichia coli CFT073; Escherichia coli O157:H7 str. Sakai; Escherichia coli str. K-12 substr. MG1655

Type:: Expression profiling by array

Platform:: GPL13359
6 Samples

Download data: TXT

Series

Accession:: GSE178954

ID:: 200178954

Analyze with GEO2R

Select item 1000133592.

Agilent-020097 E. coli Gene Expression Microarray (Probe Name version)

(Submitter supplied) E. coli (K12-MG1655, CFT073, O157-H7 EDL933, O157-H7 VT2-Sakai) Oligo Microarray *** The ID column includes the Agilent Probe Names. A different version of this platform with the Agilent Feature Extraction feature numbers in the ID column is assigned accession number GPL13360. Protocol: see manufacturer's web site at http://www.agilent.com/

Organism:: Escherichia coli O157:H7 str. EDL933; Escherichia coli CFT073; Escherichia coli O157:H7 str. Sakai; Escherichia coli str. K-12 substr. MG1655

21 Series
1 Related Platform
203 Samples

Platform

Accession:: GPL13359

ID:: 100013359

Select item 3054019773.

E. coli WT vs hdeD 2

Organism:: Escherichia coli BW25113

Source name:: WT 2 (channel 1) hdeD-2 (channel 2)

Platform:: GPL13359
Series:: GSE178954

Download data: TXT

Sample

Accession:: GSM5401977

ID:: 305401977

Select item 3054019764.

E. coli WT vs hdeD 1

Organism:: Escherichia coli BW25113

Source name:: WT 1 (channel 1) hdeD-1 (channel 2)

Platform:: GPL13359
Series:: GSE178954

Download data: TXT

Sample

Accession:: GSM5401976

ID:: 305401976

Select item 3054019755.

E. coli WT vs hdeA 2

Organism:: Escherichia coli BW25113

Source name:: WT 2 (channel 1) hdeA-2 (channel 2)

Platform:: GPL13359
Series:: GSE178954

Download data: TXT

Sample

Accession:: GSM5401975

ID:: 305401975

Select item 3054019746.

E. coli WT vs hdeA 1

Organism:: Escherichia coli BW25113

Source name:: WT 1 (channel 1) hdeA-1 (channel 2)

Platform:: GPL13359
Series:: GSE178954

Download data: TXT

Sample

Accession:: GSM5401974

ID:: 305401974

Select item 3054019737.

E. coli WT vs gadE 2

Organism:: Escherichia coli BW25113

Source name:: WT 2 (channel 1) gadE-2 (channel 2)

Platform:: GPL13359
Series:: GSE178954

Download data: TXT

Sample

Accession:: GSM5401973

ID:: 305401973

Select item 3054019728.

E. coli WT vs gadE 1

Organism:: Escherichia coli BW25113

Source name:: WT 1 (channel 1) gadE-1 (channel 2)

Platform:: GPL13359
Series:: GSE178954

Download data: TXT

Sample

Accession:: GSM5401972

ID:: 305401972

Supplemental Content

Filters: Manage Filters

Find related data

Search details

Important Links

Recent activity

Clear Turn Off Turn On

GSE178954[Accession] (8)
GEO DataSets

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

See more...

You are here: NCBI > Genes & Expression > Gene Expression Omnibus (GEO) Datasets