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Items: 1 to 20 of 42

1.

PHYTOCHROME-INTERACTING FACTOR 7-mediated epigenetic reprogramming promotes the transcriptional response to shade in Arabidopsis

(Submitter supplied) ChIP-Seq were performed using 35S::GFP-ASF1A, pHTR13::HTR13-HA, pHTR5::HTR5-HA, and pHTR5::HTR5-HA/pif7-1 transgenic plants after white light and 1 hr shade treatment. Two biological replicates were prepared for each genotype of plants grown under light and shade conditions. High-confidence binding peaks with cut off fold change > 1.5 and P-value <0.01. Our data reveal that ASF1 directly regulating a subset of target genes of PIF7. more...
Organism:
Arabidopsis thaliana
Type:
Genome binding/occupancy profiling by high throughput sequencing
Platform:
GPL26208
40 Samples
Download data: BW
Series
Accession:
GSE193955
ID:
200193955

2.

Illumina NovaSeq 6000 (Arabidopsis thaliana)

Organism:
Arabidopsis thaliana
445 Series
8313 Samples
Download data
Platform
Accession:
GPL26208
ID:
100026208

3.

SH_ASF1A_set2_IP

Organism:
Arabidopsis thaliana
Source name:
6-day-white-light grown seedlings
Platform:
GPL26208
Series:
GSE193955
Download data: BW
Sample
Accession:
GSM6923781
ID:
306923781

SRA Run Selector

4.

SH_ASF1A_set2_input

Organism:
Arabidopsis thaliana
Source name:
6-day-white-light grown seedlings
Platform:
GPL26208
Series:
GSE193955
Download data: BW
Sample
Accession:
GSM6923780
ID:
306923780

SRA Run Selector

5.

SH_ASF1A_set1_IP

Organism:
Arabidopsis thaliana
Source name:
6-day-white-light grown seedlings
Platform:
GPL26208
Series:
GSE193955
Download data: BW
Sample
Accession:
GSM6923779
ID:
306923779

SRA Run Selector

6.

SH_ASF1A_set1_input

Organism:
Arabidopsis thaliana
Source name:
6-day-white-light grown seedlings
Platform:
GPL26208
Series:
GSE193955
Download data: BW
Sample
Accession:
GSM6923778
ID:
306923778

SRA Run Selector

7.

WL_ASF1A_set2_IP

Organism:
Arabidopsis thaliana
Source name:
6-day-white-light grown seedlings
Platform:
GPL26208
Series:
GSE193955
Download data: BW
Sample
Accession:
GSM6923777
ID:
306923777

SRA Run Selector

8.

WL_ASF1A_set2_input

Organism:
Arabidopsis thaliana
Source name:
6-day-white-light grown seedlings
Platform:
GPL26208
Series:
GSE193955
Download data: BW
Sample
Accession:
GSM6923776
ID:
306923776

SRA Run Selector

9.

WL_ASF1A_set1_IP

Organism:
Arabidopsis thaliana
Source name:
6-day-white-light grown seedlings
Platform:
GPL26208
Series:
GSE193955
Download data: BW
Sample
Accession:
GSM6923775
ID:
306923775

SRA Run Selector

10.

WL_ASF1A_set1_input

Organism:
Arabidopsis thaliana
Source name:
6-day-white-light grown seedlings
Platform:
GPL26208
Series:
GSE193955
Download data: BW
Sample
Accession:
GSM6923774
ID:
306923774

SRA Run Selector

11.

SH_HTR13_set2_IP

Organism:
Arabidopsis thaliana
Source name:
whole seedlings
Platform:
GPL26208
Series:
GSE193955
Download data: BW
Sample
Accession:
GSM6675666
ID:
306675666

SRA Run Selector

12.

SH_HTR13_set2_input

Organism:
Arabidopsis thaliana
Source name:
whole seedlings
Platform:
GPL26208
Series:
GSE193955
Download data: BW
Sample
Accession:
GSM6675665
ID:
306675665

SRA Run Selector

13.

WL_HTR13_set2_IP

Organism:
Arabidopsis thaliana
Source name:
whole seedlings
Platform:
GPL26208
Series:
GSE193955
Download data: BW
Sample
Accession:
GSM6675664
ID:
306675664

SRA Run Selector

14.

WL_HTR13_set2_input

Organism:
Arabidopsis thaliana
Source name:
whole seedlings
Platform:
GPL26208
Series:
GSE193955
Download data: BW
Sample
Accession:
GSM6675663
ID:
306675663

SRA Run Selector

15.

SH_HTR5_pif7_set2_IP

Organism:
Arabidopsis thaliana
Source name:
8-day-old white light-grown pHTR5::HTR5-HA /pif7-1 seedlings
Platform:
GPL26208
Series:
GSE193955
Download data: BW
Sample
Accession:
GSM6573824
ID:
306573824

SRA Run Selector

16.

SH_HTR5_pif7_set1_IP

Organism:
Arabidopsis thaliana
Source name:
8-day-old white light-grown pHTR5::HTR5-HA /pif7-1 seedlings
Platform:
GPL26208
Series:
GSE193955
Download data: BW
Sample
Accession:
GSM6573823
ID:
306573823

SRA Run Selector

17.

SH_HTR5_pif7_set2_input

Organism:
Arabidopsis thaliana
Source name:
8-day-old white light-grown pHTR5::HTR5-HA /pif7-1 seedlings
Platform:
GPL26208
Series:
GSE193955
Download data: BW
Sample
Accession:
GSM6573822
ID:
306573822

SRA Run Selector

18.

SH_HTR5_pif7_set1_input

Organism:
Arabidopsis thaliana
Source name:
8-day-old white light-grown pHTR5::HTR5-HA /pif7-1 seedlings
Platform:
GPL26208
Series:
GSE193955
Download data: BW
Sample
Accession:
GSM6573821
ID:
306573821

SRA Run Selector

19.

WL_HTR5_pif7_set2_IP

Organism:
Arabidopsis thaliana
Source name:
8-day-old white light-grown pHTR5::HTR5-HA /pif7-1 seedlings
Platform:
GPL26208
Series:
GSE193955
Download data: BW
Sample
Accession:
GSM6573820
ID:
306573820

SRA Run Selector

20.

WL_HTR5_pif7_set1_IP

Organism:
Arabidopsis thaliana
Source name:
8-day-old white light-grown pHTR5::HTR5-HA /pif7-1 seedlings
Platform:
GPL26208
Series:
GSE193955
Download data: BW
Sample
Accession:
GSM6573819
ID:
306573819

SRA Run Selector

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db=gds|term=GSE193955[Accession]|query=1|qty=2|blobid=MCID_6669871abb845b085b74c942|ismultiple=true|min_list=5|max_list=20|def_tree=20|def_list=|def_view=|url=/Taxonomy/backend/subset.cgi?|trace_url=/stat?
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