GSE21072[Accession] - GEO DataSets

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Items: 10

Select item 2000210721.

The CRE1 carbon catabolite repressor of the fungus Trichoderma reesei: a master regulator of carbon assimilation

(Submitter supplied) The identification and characterization of the transcriptional regulatory networks governing the physiological behaviour and adaptation of microbial cells is a key step in understanding their behaviour. One such wide-domain regulatory circuit, essential to all cells, is carbon catabolite repression (CCR): it allows the cell to prefer some carbon sources, whose assimilation is of high nutritional value, over less profitable ones. more...

Organism:: Trichoderma reesei

Type:: Expression profiling by genome tiling array

Platform:: GPL9076
8 Samples

Download data: GPR

Series

Accession:: GSE21072

ID:: 200021072

PubMed Full text in PMC Similar studies Analyze with GEO2R

Select item 1000090762.

ENS SGDB Trichoderma reesei Tr20_Tiling140_1 240k oligo array

(Submitter supplied) Trichoderma reesei Tiling array. One probe has been design every 140 base every other strand. The probe design has been done according to T. reesei v2.0 genome assembly from the DOE JGI available here: http://genome.jgi-psf.org/Trire2/Trire2.home.html The probe ID is a code to fing genome localisation of each probe: Scaffold_Start_Strand The first number indicate the scaffold number The second number is the start position of the probe The third number is the strand FWD or REV An alternative version of this platform is accessioned as GPL18867 Protocol: In situ oligonucleotide synthesis of 60mer custom oligos. more...

Organism:: Trichoderma reesei

3 Series
25 Samples

Download data

Platform

Accession:: GPL9076

ID:: 100009076

Select item 3005268643.

QM9414 strain deleted for Cre1 under carbon catabolite repression versus under carbon catabolite derepression dye switch

Organism:: Trichoderma reesei

Source name:: Total RNA extracted from T reesei QM9414 strain deleted for Cre1 under carbon catabolite derepression. (channel 1) Total RNA extracted from T reesei QM9414 strain deleted for Cre1 under carbon catabolite repression. (channel 2)

Platform:: GPL9076
Series:: GSE21072

Download data: GPR

Sample

Accession:: GSM526864

ID:: 300526864

Select item 3005268634.

QM9414 strain deleted for Cre1 under carbon catabolite repression versus under carbon catabolite derepression

Organism:: Trichoderma reesei

Source name:: Total RNA extracted from T reesei QM9414 strain deleted for Cre1 under carbon catabolite derepression. (channel 1) Total RNA extracted from T reesei QM9414 strain deleted for Cre1 under carbon catabolite repression. (channel 2)

Platform:: GPL9076
Series:: GSE21072

Download data: GPR

Sample

Accession:: GSM526863

ID:: 300526863

Select item 3005268625.

QM9414 strain under carbon catabolite repression versus under carbon catabolite derepression dye switch

Organism:: Trichoderma reesei

Source name:: Total RNA extracted from T reesei QM9414 strain under carbon catabolite derepression. (channel 1) Total RNA extracted from T reesei QM9414 strain under carbon catabolite repression. (channel 2)

Platform:: GPL9076
Series:: GSE21072

Download data: GPR

Sample

Accession:: GSM526862

ID:: 300526862

Select item 3005268616.

QM9414 strain under carbon catabolite repression versus under carbon catabolite derepression

Organism:: Trichoderma reesei

Source name:: Total RNA extracted from T reesei QM9414 strain under carbon catabolite derepression. (channel 1) Total RNA extracted from T reesei QM9414 strain under carbon catabolite repression. (channel 2)

Platform:: GPL9076
Series:: GSE21072

Download data: GPR

Sample

Accession:: GSM526861

ID:: 300526861

Select item 3005268607.

QM9414 strain deleted for Cre1 versus QM9411 strain under carbon catabolite derepression dye switch

Organism:: Trichoderma reesei

Source name:: Total RNA extracted from T reesei QM9414 strain deleted for Cre1 under carbon catabolite derepression. (channel 1) Total RNA extracted from T reesei QM9414 strain under carbon catabolite derepression. (channel 2)

Platform:: GPL9076
Series:: GSE21072

Download data: GPR

Sample

Accession:: GSM526860

ID:: 300526860

Select item 3005268598.

QM9414 strain deleted for Cre1 versus QM9411 strain under carbon catabolite derepression

Organism:: Trichoderma reesei

Source name:: Total RNA extracted from T reesei QM9414 strain deleted for Cre1 under carbon catabolite derepression. (channel 1) Total RNA extracted from T reesei QM9414 strain under carbon catabolite derepression. (channel 2)

Platform:: GPL9076
Series:: GSE21072

Download data: GPR

Sample

Accession:: GSM526859

ID:: 300526859

Select item 3005268589.

QM9414 strain deleted for Cre1 versus QM9411 strain under carbon catabolite repression dye switch

Organism:: Trichoderma reesei

Source name:: Total RNA extracted from T reesei QM9414 strain deleted for Cre1 under carbon catabolite repression. (channel 1) Total RNA extracted from T reesei QM9414 strain under carbon catabolite repression. (channel 2)

Platform:: GPL9076
Series:: GSE21072

Download data: GPR

Sample

Accession:: GSM526858

ID:: 300526858

Select item 30052685710.

QM9414 strain deleted for Cre1 versus QM9411 strain under carbon catabolite repression

Organism:: Trichoderma reesei

Source name:: Total RNA extracted from T reesei QM9414 strain deleted for Cre1 under carbon catabolite repression. (channel 1) Total RNA extracted from T reesei QM9414 strain under carbon catabolite repression. (channel 2)