GSE212358[Accession] - GEO DataSets - NCBI

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Select item 2002123581.

A global survey of phytoviral RNA 3' uridylation identifies extreme variations and virus-specific patterns

(Submitter supplied) This SuperSeries is composed of the SubSeries listed below.

Organism:: Chenopodium quinoa; Spinacia oleracea; Arabidopsis thaliana; Vitis vinifera; Nicotiana benthamiana; Nicotiana obtusifolia

Type:: Expression profiling by high throughput sequencing

12 related Platforms
140 Samples

Series

Accession:: GSE212358

ID:: 200212358

PubMed Full text in PMC Similar studies

Select item 1000326182.

Illumina MiSeq (Chenopodium quinoa; Vitis vinifera)

Organism:: Vitis vinifera; Chenopodium quinoa

2 Series
6 Samples

Platform

Accession:: GPL32618

ID:: 100032618

Select item 1000326173.

Illumina MiSeq (Chenopodium quinoa; Nicotiana benthamiana; Vitis vinifera)

Organism:: Nicotiana benthamiana; Vitis vinifera; Chenopodium quinoa

2 Series
3 Samples

Platform

Accession:: GPL32617

ID:: 100032617

Select item 1000326164.

Illumina MiSeq (Chenopodium quinoa)

Organism:: Chenopodium quinoa

2 Series
13 Samples

Platform

Accession:: GPL32616

ID:: 100032616

Select item 1000326145.

Illumina MiSeq (Nicotiana benthamiana; Spinacia oleracea)

Organism:: Spinacia oleracea; Nicotiana benthamiana

2 Series
2 Samples

Platform

Accession:: GPL32614

ID:: 100032614

Select item 1000326136.

Illumina MiSeq (Spinacia oleracea)

Organism:: Spinacia oleracea

2 Series
1 Sample

Platform

Accession:: GPL32613

ID:: 100032613

Select item 1000326127.

Illumina MiSeq (Arabidopsis thaliana; Vitis vinifera)

Organism:: Arabidopsis thaliana; Vitis vinifera

2 Series
1 Sample

Platform

Accession:: GPL32612

ID:: 100032612

Select item 1000326118.

Illumina MiSeq (Spinacia oleracea; Vitis vinifera)

Organism:: Spinacia oleracea; Vitis vinifera

2 Series
1 Sample

Platform

Accession:: GPL32611

ID:: 100032611

Select item 1000326109.

Illumina MiSeq (Nicotiana benthamiana; Vitis vinifera)

Organism:: Nicotiana benthamiana; Vitis vinifera

2 Series
1 Sample

Platform

Accession:: GPL32610

ID:: 100032610

Select item 10003260910.

Illumina MiSeq (Chenopodium quinoa; Nicotiana benthamiana; Nicotiana obtusifolia; Vitis vinifera)

Organism:: Nicotiana benthamiana; Vitis vinifera; Chenopodium quinoa; Nicotiana obtusifolia

2 Series
3 Samples

Platform

Accession:: GPL32609

ID:: 100032609

Select item 10002959111.

Illumina MiSeq (Vitis vinifera)

Organism:: Vitis vinifera

5 Series
22 Samples

Platform

Accession:: GPL29591

ID:: 100029591

Select item 10002207212.

Illumina MiSeq (Nicotiana benthamiana)

Organism:: Nicotiana benthamiana

8 Series
64 Samples

Platform

Accession:: GPL22072

ID:: 100022072

Select item 10001797013.

Illumina MiSeq (Arabidopsis thaliana)

Organism:: Arabidopsis thaliana

65 Series
563 Samples

Platform

Accession:: GPL17970

ID:: 100017970

Select item 30652855414.

TRSV_RNA1_Plant3; CLRV_RNA1_Plant3; SLRSV_RNA1_Plant3_C.quinoa

Organism:: Chenopodium quinoa; Vitis vinifera

Source name:: Infected leaves of C. quinoa and V. vinifera

Platform:: GPL32618
Series:: GSE212354 GSE212358

Sample

Accession:: GSM6528554

ID:: 306528554

SRA Run Selector

Select item 30652855315.

TRSV_RNA1_Plant2; CLRV_RNA1_Plant2; SLRSV_RNA1_Plant2_C.quinoa

Organism:: Chenopodium quinoa; Vitis vinifera

Source name:: Infected leaves of C. quinoa and V. vinifera

Platform:: GPL32618
Series:: GSE212354 GSE212358

Sample

Accession:: GSM6528553

ID:: 306528553

SRA Run Selector

Select item 30652855216.

TRSV_RNA1_Plant1; CLRV_RNA1_Plant1; SLRSV_RNA1_Plant1_C.quinoa

Organism:: Chenopodium quinoa; Vitis vinifera

Source name:: Infected leaves of C. quinoa and V. vinifera

Platform:: GPL32618
Series:: GSE212354 GSE212358

Sample

Accession:: GSM6528552

ID:: 306528552

SRA Run Selector

Select item 30652854417.

ARMV_RNA1&2 V. vinifera_Plant3, SLRV_RNA1 Plant3 V.vinifera; CNDV Plant2 N. benthamiana

Organism:: Vitis vinifera; Chenopodium quinoa

Source name:: Infected leaves of C. quinoa and V. vinifera

Platform:: GPL32618
Series:: GSE212354 GSE212358

Sample

Accession:: GSM6528544

ID:: 306528544

SRA Run Selector

Select item 30652854318.

ARMV_RNA1&2 C. quinoa_Plant3; SLRSV_RNA1_Plant2 V.vinifera; CNDV Plant1 N. benthamiana

Organism:: Vitis vinifera; Chenopodium quinoa

Source name:: Infected leaves of C. quinoa and V. vinifera

Platform:: GPL32618
Series:: GSE212354 GSE212358

Sample

Accession:: GSM6528543

ID:: 306528543

SRA Run Selector

Select item 30652854219.

ARMV_RNA1&2 C. quinoa_Plant2; SLRSV_RNA1_Plant1 V.vinifera

Organism:: Chenopodium quinoa; Vitis vinifera

Source name:: Infected leaves of C. quinoa and V. vinifera

Platform:: GPL32618
Series:: GSE212354 GSE212358

Sample

Accession:: GSM6528542

ID:: 306528542

SRA Run Selector

Select item 30652855820.

SLRSV_RNA2_Plant2 C.quinoa

Organism:: Chenopodium quinoa

Source name:: Infected leaves of C. quinoa

Platform:: GPL32616
Series:: GSE212354 GSE212358

Sample

Accession:: GSM6528558

ID:: 306528558

SRA Run Selector

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GSE212358[Accession] (153)
GEO DataSets
Bacillus subtilis strain CBP-3221 CBP-3221_S38_contig_0000063, whole genome shot...
Bacillus subtilis strain CBP-3221 CBP-3221_S38_contig_0000063, whole genome shotgun sequence
gi|2651073620|ref|NZ_JARRSV01000006 gnl|WGS:NZ_JARRSV01|CBP-3221_S38_contig_0000063

Nucleotide

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