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Items: 8

1.

Genome wide analysis of acral melanoma

(Submitter supplied) This SuperSeries is composed of the SubSeries listed below.
Organism:
Homo sapiens
Type:
Expression profiling by array; SNP genotyping by SNP array; Genome variation profiling by SNP array
Platforms:
GPL6801 GPL6884
5 Samples
Download data: CEL, CHP
Series
Accession:
GSE28913
ID:
200028913
2.

Illumina HumanWG-6 v3.0 expression beadchip

(Submitter supplied) The HumanWG-6 v3.0 Expression BeadChip features up-to-date content derived from the National Center for Biotechnology Information Reference Sequence (NCBI RefSeq) database (Build 36.2, Release 22). Please use the GEO Data Submission Report Plug-in v1.0 for Gene Expression which may be downloaded from https://icom.illumina.com/icom/software.ilmn?id=234 to format the normalized and raw data. These should be submitted as part of a GEOarchive. more...
Organism:
Homo sapiens
9 DataSets
324 Series
9525 Samples
Download data: BGX
Platform
Accession:
GPL6884
ID:
100006884
3.

[GenomeWideSNP_6] Affymetrix Genome-Wide Human SNP 6.0 Array

(Submitter supplied) Affymetrix submissions are typically submitted to GEO using the GEOarchive method described at http://www.ncbi.nlm.nih.gov/projects/geo/info/geo_affy.html June 03, 2009: annotation table updated with netaffx build 28 (ucsc=hg18; ncbi=NCBI36) August 01, 2012: annotation table updated with netaffx build 32 (ucsc=hg19; ncbi=GRCh37) Protocol: see manufacturer's web site The new Affymetrix® Genome-Wide Human SNP Array 6.0 features 1.8 million genetic markers, including more than 906,600 single nucleotide polymorphisms (SNPs) and more than 946,000 probes for the detection of copy number variation. more...
Organism:
Homo sapiens
403 Series
22856 Samples
Download data
Platform
Accession:
GPL6801
ID:
100006801
4.

Metastatic acral melanoma

Organism:
Homo sapiens
Source name:
lymph node
Platform:
GPL6884
Series:
GSE28909 GSE28913
Download data
Sample
Accession:
GSM716431
ID:
300716431
5.

Primary acral melanoma

Organism:
Homo sapiens
Source name:
Toe nail bed
Platform:
GPL6884
Series:
GSE28909 GSE28913
Download data
Sample
Accession:
GSM716430
ID:
300716430
6.

DNA from Metastatic acral melanoma

Organism:
Homo sapiens
Source name:
lymph node
Platform:
GPL6801
Series:
GSE28910 GSE28913
Download data: CEL, CHP
Sample
Accession:
GSM716434
ID:
300716434
7.

DNA from Primary acral melanoma

Organism:
Homo sapiens
Source name:
Toe nail bed
Platform:
GPL6801
Series:
GSE28910 GSE28913
Download data: CEL, CHP
Sample
Accession:
GSM716433
ID:
300716433
8.

Germline DNA from blood

Organism:
Homo sapiens
Source name:
blood
Platform:
GPL6801
Series:
GSE28910 GSE28913
Download data: CEL, CHP
Sample
Accession:
GSM716432
ID:
300716432
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