GSE3016[Accession] - GEO DataSets - NCBI

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Select item 2000030161.

Gene expression evidence for remodeling of lateral hypothalamic circuitry in cocaine addiction

(Submitter supplied) By using high-density oligonucleotide arrays, we profiled gene expression in reward-related brain regions of rats that developed escalated cocaine intake after extended access to cocaine (6 h per day). Rats allowed restricted daily access to cocaine (only 1 h) that displayed a stable level of cocaine intake and cocaine naive rats were used for controls. Four analysis methods were compared: Affymetrix microarray suite 4 and microarray suite 5, which use perfect-match-minus-mismatch models, and dchip and rma, which use perfect-match-only models to generate expression values. more...

Organism:: Rattus norvegicus

Type:: Expression profiling by array

Dataset:: GDS1608
Platform:: GPL88
63 Samples

Series

Accession:: GSE3016

ID:: 200003016

PubMed Full text in PMC Similar studies Analyze with GEO2R

Select item 16082.

Full record GDS1608

Cocaine addiction effect on reward-related brain regions

Analysis of reward-related brain regions from Wistar males with restricted (1 h) or extended (6 h) daily access to cocaine. Escalated cocaine intake (ESC) developed in subjects with extended access. Results provide insight into molecular mechanisms underlying the transition to compulsive drug use.

Organism:: Rattus norvegicus

Type:: Expression profiling by array, count, 3 protocol, 6 tissue sets

Platform:: GPL88
Series:: GSE3016
63 Samples

DataSet

Accession:: GDS1608

ID:: 1608

PubMed Full text in PMC Similar studies GEO Profiles Analyze DataSet

Select item 1000000883.

[RN_U34] Affymetrix Rat Neurobiology U34 Array

(Submitter supplied) Affymetrix submissions are typically submitted to GEO using the GEOarchive method described at http://www.ncbi.nlm.nih.gov/projects/geo/info/geo_affy.html June 03, 2009: annotation table updated with netaffx build 28 June 21, 2012: annotation table updated with netaffx build 32 Protocol: see manufacturer's web site Has 1322 entries and was indexed 29-Jan-2002. Sequences were selected based on their known relevance to the field of neurobiology. more...

Organism:: Rattus norvegicus

3 DataSets
7 Series
239 Samples

Platform

Accession:: GPL88

ID:: 100000088

Select item 3000938754.

medial prefrontal cortex long access to cocaine replicate 3

Organism:: Rattus norvegicus

Source name:: medial prefrontal cortex

Platform:: GPL88
Series:: GSE3016
Dataset:: GDS1608

Sample

Accession:: GSM93875

ID:: 300093875

Select item 3000938745.

medial prefrontal cortex long access to cocaine replicate 2

Organism:: Rattus norvegicus

Source name:: medial prefrontal cortex

Platform:: GPL88
Series:: GSE3016
Dataset:: GDS1608

Sample

Accession:: GSM93874

ID:: 300093874

Select item 3000938736.

medial prefrontal cortex long access to cocaine replicate 1

Organism:: Rattus norvegicus

Source name:: medial prefrontal cortex

Platform:: GPL88
Series:: GSE3016
Dataset:: GDS1608

Sample

Accession:: GSM93873

ID:: 300093873

Select item 3000938727.

medial prefrontal cortex short access to cocaine replicate 3

Organism:: Rattus norvegicus

Source name:: medial prefrontal cortex

Platform:: GPL88
Series:: GSE3016
Dataset:: GDS1608

Sample

Accession:: GSM93872

ID:: 300093872

Select item 3000938718.

medial prefrontal cortex short access to cocaine replicate 2

Organism:: Rattus norvegicus

Source name:: medial prefrontal cortex

Platform:: GPL88
Series:: GSE3016
Dataset:: GDS1608

Sample

Accession:: GSM93871

ID:: 300093871

Select item 3000938709.

medial prefrontal cortex short access to cocaine replicate 1

Organism:: Rattus norvegicus

Source name:: medial prefrontal cortex

Platform:: GPL88
Series:: GSE3016
Dataset:: GDS1608

Sample

Accession:: GSM93870

ID:: 300093870

Select item 30009386910.

medial prefrontal cortex cocaine naive replicate 3

Organism:: Rattus norvegicus

Source name:: medial prefrontal cortex

Platform:: GPL88
Series:: GSE3016
Dataset:: GDS1608

Sample

Accession:: GSM93869

ID:: 300093869

Select item 30009386811.

medial prefrontal cortex cocaine naive replicate 2

Organism:: Rattus norvegicus

Source name:: medial prefrontal cortex

Platform:: GPL88
Series:: GSE3016
Dataset:: GDS1608

Sample

Accession:: GSM93868

ID:: 300093868

Select item 30009386712.

medial prefrontal cortex cocaine naive replicate 1

Organism:: Rattus norvegicus

Source name:: medial prefrontal cortex

Platform:: GPL88
Series:: GSE3016
Dataset:: GDS1608

Sample

Accession:: GSM93867

ID:: 300093867

Select item 30009386613.

ventral tegmental area long access to cocaine replicate 3

Organism:: Rattus norvegicus

Source name:: ventral tegmental area

Platform:: GPL88
Series:: GSE3016
Dataset:: GDS1608

Sample

Accession:: GSM93866

ID:: 300093866

Select item 30009386514.

ventral tegmental area long access to cocaine replicate 2

Organism:: Rattus norvegicus

Source name:: ventral tegmental area

Platform:: GPL88
Series:: GSE3016
Dataset:: GDS1608

Sample

Accession:: GSM93865

ID:: 300093865

Select item 30009386415.

ventral tegmental area long access to cocaine replicate 1

Organism:: Rattus norvegicus

Source name:: ventral tegmental area

Platform:: GPL88
Series:: GSE3016
Dataset:: GDS1608

Sample

Accession:: GSM93864

ID:: 300093864

Select item 30009386316.

ventral tegmental area short access to cocaine replicate 3

Organism:: Rattus norvegicus

Source name:: ventral tegmental area

Platform:: GPL88
Series:: GSE3016
Dataset:: GDS1608

Sample

Accession:: GSM93863

ID:: 300093863

Select item 30009386217.

ventral tegmental area short access to cocaine replicate 2

Organism:: Rattus norvegicus

Source name:: ventral tegmental area

Platform:: GPL88
Series:: GSE3016
Dataset:: GDS1608

Sample

Accession:: GSM93862

ID:: 300093862

Select item 30009386118.

ventral tegmental area short access to cocaine replicate 1

Organism:: Rattus norvegicus

Source name:: ventral tegmental area

Platform:: GPL88
Series:: GSE3016
Dataset:: GDS1608

Sample

Accession:: GSM93861

ID:: 300093861

Select item 30009386019.

ventral tegmental area cocaine naive replicate 3

Organism:: Rattus norvegicus

Source name:: ventral tegmental area

Platform:: GPL88
Series:: GSE3016
Dataset:: GDS1608

Sample

Accession:: GSM93860

ID:: 300093860

Select item 30009385920.

ventral tegmental area cocaine naive replicate 2

Organism:: Rattus norvegicus

Source name:: ventral tegmental area

Platform:: GPL88
Series:: GSE3016
Dataset:: GDS1608

Sample

Accession:: GSM93859

ID:: 300093859

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GSE3016[Accession] (66)
GEO DataSets
Chain p, U2 small nuclear ribonucleoprotein B''
Chain p, U2 small nuclear ribonucleoprotein B''
gi|1938954458|pdb|5ZWM|p

Protein
Chain m, Small nuclear ribonucleoprotein Sm D1
Chain m, Small nuclear ribonucleoprotein Sm D1
gi|1938954455|pdb|5ZWM|m

Protein
Chain c, Small nuclear ribonucleoprotein Sm D2
Chain c, Small nuclear ribonucleoprotein Sm D2
gi|1938954481|pdb|5ZWO|c

Protein
Schizosaccharomyces pombe nucleoside 2-deoxyribosyltransferase (SPOM_SPCC191.05C...
Schizosaccharomyces pombe nucleoside 2-deoxyribosyltransferase (SPOM_SPCC191.05C), mRNA
gi|2745683027|ref|NM_001023284.3|

Nucleotide

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