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Items: 6

1.

IBM1, a JmjC domain histone demethylase, is involved in the regulation of RNA-directed DNA methylation through epigenetic control of RDR2 and DCL3 expression in Arabidopsis.

(Submitter supplied) The small RNA mediated DNA methylation (RdDM) is highly elaborated in Arabidopsis as an important epigenetic pathway controls expression of genes and multiple developmental processes. RDR2 and DCL3 are necessary factors to the 24-nt siRNA biogenesis and the RdDM pathway. Here, we find that IBM1 (increase in BONSAI methylation 1), a conserved JmjC family histone demethylase, could directly associated with the chromatin of RDR2 and DCL3. more...
Organism:
Arabidopsis thaliana
Type:
Other; Expression profiling by high throughput sequencing; Non-coding RNA profiling by high throughput sequencing
Platform:
GPL9062
4 Samples
Download data: TXT
Series
Accession:
GSE32284
ID:
200032284

PubMed Full text in PMC Similar studies SRA Run Selector

2.

Illumina Genome Analyzer (Arabidopsis thaliana)

Organism:
Arabidopsis thaliana
93 Series
435 Samples
Download data
Platform
Accession:
GPL9062
ID:
100009062

3.

smRNAseq_ibm1_3

Organism:
Arabidopsis thaliana
Source name:
seedling
Platform:
GPL9062
Series:
GSE32284
Download data: TXT
Sample
Accession:
GSM799869
ID:
300799869

SRA Run Selector

4.

smRNAseq_WT_Col_0

Organism:
Arabidopsis thaliana
Source name:
seedling
Platform:
GPL9062
Series:
GSE32284
Download data: TXT
Sample
Accession:
GSM799868
ID:
300799868

SRA Run Selector

5.

mRNASeq_ibm1_3

Organism:
Arabidopsis thaliana
Source name:
seedling
Platform:
GPL9062
Series:
GSE32284
Download data: TXT
Sample
Accession:
GSM799867
ID:
300799867

SRA Run Selector

6.

mRNASeq_WT_Col_0

Organism:
Arabidopsis thaliana
Source name:
seedling
Platform:
GPL9062
Series:
GSE32284
Download data: TXT
Sample
Accession:
GSM799866
ID:
300799866

SRA Run Selector

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db=gds|term=GSE32284[Accession]|query=4|qty=2|blobid=MCID_672e1afdad0a37579f46788c|ismultiple=true|min_list=5|max_list=20|def_tree=20|def_list=|def_view=|url=/Taxonomy/backend/subset.cgi?|trace_url=/stat?
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