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Items: 3

1.

A HUS-associated STEC expressing a dicA transcriptional module is related to gene network dysregulation in Caco-2

(Submitter supplied) We conducted comparative gene co-expression network (GCN) analyses of two O113:H21 STEC strains: EH41, reference strain, isolated from hemolytic-uremic syndrome patient in Australia, and Ec472/01, isolated from cattle feces in Brazil. These strains were cultured in fresh or in Caco-2 cell conditioned media. GCN analyses were also accomplished for cultured Caco-2 cells exposed to EH41 or Ec472/01. Differential transcriptome profiles for EH41 and Ec472/01 were not significantly changed by exposure to fresh or Caco-2 conditioned media. more...
Organism:
Escherichia coli O157:H7 str. EDL933; Escherichia coli str. K-12 substr. MG1655; Escherichia coli; Homo sapiens; Escherichia coli CFT073; Escherichia coli O157:H7 str. Sakai
Type:
Expression profiling by array
Platforms:
GPL13359 GPL6480
32 Samples
Download data: TXT
Series
Accession:
GSE45979
ID:
200045979
2.

Agilent-014850 Whole Human Genome Microarray 4x44K G4112F (Probe Name version)

(Submitter supplied) This multi-pack (4X44K) formatted microarray represents a compiled view of the human genome as it is understood today. The sequence information used to design this product was derived from a broad survey of well known sources such as RefSeq, Goldenpath, Ensembl, Unigene and others. The resulting view of the human genome covers 41K unique genes and transcripts which have been verified and optimized by alignment to the human genome assembly and by Agilent's Empirical Validation process. more...
Organism:
Homo sapiens
21 DataSets
943 Series
4 Related Platforms
24853 Samples
Download data
Platform
Accession:
GPL6480
ID:
100006480
3.

Caco after 3 hrs interaction with STEC EC472, replicate 1 [EC472]

Organism:
Homo sapiens
Source name:
Caco-2 cell, STEC interaction
Platform:
GPL6480
Series:
GSE45979
Download data: TXT
Sample
Accession:
GSM1120938
ID:
301120938
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