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Items: 4

1.

Elucidating transcriptional regulation of nitrogen metabolism with systems approaches

(Submitter supplied) This SuperSeries is composed of the SubSeries listed below.
Organism:
Escherichia coli K-12; Escherichia coli str. K-12 substr. MG1655
Type:
Genome binding/occupancy profiling by high throughput sequencing; Expression profiling by high throughput sequencing
Platforms:
GPL17439 GPL26204
56 Samples
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Series
Accession:
GSE54905
ID:
200054905
2.

Elucidating transcriptional regulation of nitrogen metabolism with systems approaches [ChIP-Seq]

(Submitter supplied) NtrC and Nac have been known to be responsible for responding to nitrogen limitting conditions. In order to elucidate NtrC and Nac regulons in a genome-wide manner, RNA-seq and ChIP-exo experiments were performed for those two transcription factors under 4 different nitrogen sources, ammonia, glutamine, cytidine and cytosine.
Organism:
Escherichia coli str. K-12 substr. MG1655
Type:
Genome binding/occupancy profiling by high throughput sequencing
Platform:
GPL17439
32 Samples
Download data: CSV
Series
Accession:
GSE54902
ID:
200054902
3.

Illumina MiSeq (Escherichia coli str. K-12 substr. MG1655)

Organism:
Escherichia coli str. K-12 substr. MG1655
43 Series
238 Samples
Download data
Platform
Accession:
GPL17439
ID:
100017439
4.

Nac cytosine 1 (ChIP-exo)

Organism:
Escherichia coli str. K-12 substr. MG1655
Source name:
Immunoprecipitated DNA
Platform:
GPL17439
Series:
GSE54902 GSE54905
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Sample
Accession:
GSM1326377
ID:
301326377
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Supplemental Content

db=gds|term=GSM1326377[Accession]|query=1|qty=3|blobid=MCID_66712a0fce9c6e4cac39e25c|ismultiple=true|min_list=5|max_list=20|def_tree=20|def_list=|def_view=|url=/Taxonomy/backend/subset.cgi?|trace_url=/stat?
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