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Items: 5

1.

Oxygen-dependent transcriptome profiling in R.sphaeroides 2.4.1 in the dark

(Submitter supplied) Wild type (2.4.1) strain, dark conditions, controlled oxtgen concentration in the growth medium (achieved by constant sparging with a gas mixture containing 1% CO2, variable - indicated for every sample - concentration O2 and balance N2). Keywords: dose response
Organism:
Cereibacter sphaeroides; Cereibacter sphaeroides 2.4.1
Type:
Expression profiling by array
Platform:
GPL162
14 Samples
Download data: CEL
Series
Accession:
GSE7004
ID:
200007004
2.

PpsR regulon in Rhodobacter sphaeroides

(Submitter supplied) mRNA levels were measured in Rhodobacter sphaeroides 2.4.1 at 20% O2 and 0.5% O2, Rhodobacter sphaeroides 2.4.1 App11 (AppA-null), Rhodobacter sphaeroides 2.4.1 (pPNs) and PpsR mutant PPS2-4. The mRNA samples were prepared from cultures supplied with 20% O2, 1% CO2, and 79% N2, and grown in the dark to an OD of 0.18. The mRNA levels for each strain was measured three times. Keywords: repeat sample
Organism:
Cereibacter sphaeroides; Cereibacter sphaeroides 2.4.1
Type:
Expression profiling by array
Dataset:
GDS1709
Platform:
GPL162
15 Samples
Download data: CEL
Series
Accession:
GSE1515
ID:
200001515
3.
Full record GDS1709

Transcriptional regulator PpsR overexpressing and mutant strains

Analysis of PpsR overexpressing and mutant strains grown at normal 20% oxygen. Expression examined in wild type cells at 0.5% oxygen. PpsR represses the transcription of a subset of biosynthetic genes in photosystem (PS) formation. Results suggest that PpsR is a master regulator of PS development.
Organism:
Rhodobacter sphaeroides; Rhodobacter sphaeroides 2.4.1
Type:
Expression profiling by array, count, 4 genotype/variation, 2 growth protocol, 3 other sets
Platform:
GPL162
Series:
GSE1515
15 Samples
Download data: CEL
4.

[uwyRhodo1a] Rhodobacter sphaeroides 2.4.1 GeneChip

(Submitter supplied) 4242 candidate protein-encoding gene models Keywords = genechip Keywords = microarray Keywords = expression profile Keywords = transcription
Organism:
Cereibacter sphaeroides 2.4.1
7 DataSets
26 Series
232 Samples
Download data: CDF
Platform
Accession:
GPL162
ID:
100000162
5.

20A

Organism:
Cereibacter sphaeroides
Source name:
Rhodobacter sphaeroides 2.4.1
Platform:
GPL162
Series:
GSE1515 GSE7004
Dataset:
GDS1709
Download data: CEL
Sample
Accession:
GSM26242
ID:
300026242
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