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Items: 3

1.

ATAC-seq profiling of open chromatin with global epigenetic and transcriptional trends in two-line hybrid rice

(Submitter supplied) The transcriptional regulatory switches responsible for the mechanism of fertility conversion in two-line system of hybrid rice remain unclear. Here, we employed the ATAC-seq, combined with H3K9ac and H3K4me2 and gene expression analyses, in a rice PTGMS Line Wuxiang S to delineate an integrative chromatin accessibility profiling to uncover the key new regulatory modules in response to temperature fluctuation, which can provide important hypotheses regarding the mechanisms of fertility conversion. more...
Organism:
Oryza sativa
Type:
Genome binding/occupancy profiling by high throughput sequencing; Expression profiling by high throughput sequencing
Platforms:
GPL23013 GPL13160 GPL24468
28 Samples
Download data: BED, TXT, WIG
Series
Accession:
GSE114090
ID:
200114090
2.

Illumina HiSeq 4000 (Oryza sativa)

Organism:
Oryza sativa
50 Series
575 Samples
Download data
Platform
Accession:
GPL23013
ID:
100023013
3.

FP3_ATAC_rep2

Organism:
Oryza sativa
Source name:
Fertility male of WXS at meiosis period
Platform:
GPL23013
Series:
GSE114090
Download data: BED
Sample
Accession:
GSM3132600
ID:
303132600
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db=gds|term=GSM3132600[Accession]|query=1|qty=2|blobid=MCID_66513945d01e38019cc8cc4a|ismultiple=true|min_list=5|max_list=20|def_tree=20|def_list=|def_view=|url=/Taxonomy/backend/subset.cgi?|trace_url=/stat?
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