GSM380019[Accession] - GEO DataSets

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Items: 3

Select item 2000152171.

Response of the Pseudomonas host chromosomal transcriptome to carriage of the IncP-7 plasmid pCAR1.

(Submitter supplied) Plasmid carriage requires appropriate expression of the genes on the plasmid or host chromosome through cooperative transcriptional regulation. To clarify the impact of plasmid carriage on the host chromosome, we compared the chromosomal RNA maps of plasmid-free and plasmid-containing host strains using the incompatibility group P-7 archetype plasmid pCAR1, which is involved in carbazole degradation, and three distinct Pseudomonas strains. more...

Organism:: Pseudomonas aeruginosa PAO1; Pseudomonas fluorescens Pf0-1; Pseudomonas; Pseudomonas putida KT2440

Type:: Expression profiling by genome tiling array

4 related Platforms
9 Samples

Download data: BAR, CEL

Series

Accession:: GSE15217

ID:: 200015217

PubMed Similar studies

Select item 1000065912.

[pCAR1_8b520435F] Affymetrix CustomExpress IncP-7 plasmid pCAR1 Tiling Array

(Submitter supplied) This is an Affymetrix custom-commercial tiling array that covers the IncP-7 plasmid pCAR1 (RefSeq: NC_004444) at 9-bp density. BPMAP files are provided as supplementary files. pCAR1_8b520435FF-3.bpmap represents the forward strand of pCAR1, and pCAR1_8b520435FR-3.bpmap represents the reverse strand of pCAR1. Protocol: See manufacturer's web site.