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Items: 3

1.

Response of the Pseudomonas host chromosomal transcriptome to carriage of the IncP-7 plasmid pCAR1.

(Submitter supplied) Plasmid carriage requires appropriate expression of the genes on the plasmid or host chromosome through cooperative transcriptional regulation. To clarify the impact of plasmid carriage on the host chromosome, we compared the chromosomal RNA maps of plasmid-free and plasmid-containing host strains using the incompatibility group P-7 archetype plasmid pCAR1, which is involved in carbazole degradation, and three distinct Pseudomonas strains. more...
Organism:
Pseudomonas putida KT2440; Pseudomonas fluorescens Pf0-1; Pseudomonas aeruginosa PAO1; Pseudomonas
Type:
Expression profiling by genome tiling array
4 related Platforms
9 Samples
Download data: BAR, CEL
Series
Accession:
GSE15217
ID:
200015217
2.

[pCAR1_8b520435F] Affymetrix CustomExpress IncP-7 plasmid pCAR1 Tiling Array

(Submitter supplied) This is an Affymetrix custom-commercial tiling array that covers the IncP-7 plasmid pCAR1 (RefSeq: NC_004444) at 9-bp density. BPMAP files are provided as supplementary files. pCAR1_8b520435FF-3.bpmap represents the forward strand of pCAR1, and pCAR1_8b520435FR-3.bpmap represents the reverse strand of pCAR1. Protocol: See manufacturer's web site.
Organism:
Pseudomonas
11 Series
54 Samples
Download data: BPMAP, TXT
Platform
Accession:
GPL6591
ID:
100006591
3.

PAO1(pCAR1)_CustomExpress IncP-7 plasmid pCAR1 Tiling Array

Organism:
Pseudomonas aeruginosa PAO1
Source name:
cDNA prepared from succinate culture of PAO1(pCAR1)
Platform:
GPL6591
Series:
GSE15217
Download data: BAR, CEL
Sample
Accession:
GSM380020
ID:
300380020
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db=gds|term=GSM380020[Accession]|query=1|qty=5|blobid=MCID_6698c7d18e4788294a72fc38|ismultiple=true|min_list=5|max_list=20|def_tree=20|def_list=|def_view=|url=/Taxonomy/backend/subset.cgi?|trace_url=/stat?
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