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Items: 5

1.

Discrete genomic domains exhibit co-occurrence of H3K9me3 and H3K27me3 histone modifications throughout Drosophila

(Submitter supplied) Full title: Discrete genomic domains exhibit co-occurrence of H3K9me3 and H3K27me3 histone modifications throughout Drosophila development Trimethylation of histone H3 on lysine 9 (H3K9me3) and lysine 27 (H3K27me3) is strongly associated with gene silencing and transcriptional repression in both Drosophila and mammals. H3K9me3 is linked to the formation of heterochromatin, while H3K27me3 is a hallmark of repression of euchromatic genes by Polycomb group proteins. more...
Organism:
Drosophila melanogaster
Type:
Genome binding/occupancy profiling by genome tiling array; Genome binding/occupancy profiling by high throughput sequencing; Expression profiling by high throughput sequencing
Platforms:
GPL6951 GPL9058 GPL6949
49 Samples
Download data: BED, BEDGRAPH, TXT
Series
Accession:
GSE18572
ID:
200018572
2.

Genome-wide transcriptome sequencing at different stages of Drosophila development, RNA-seq

(Submitter supplied) This is a dataset generated by the Drosophila Regulatory Elements modENCODE Project led by Kevin P. White at the University of Chicago. It contains total RNA sequencing data generated on Solexa Genome Analyzer for whole Drosophila animals at 12 different time-points of development. Keywords: Epigenetics For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODEDataReleasePolicyFinal2008.pdf
Organism:
Drosophila melanogaster
Type:
Expression profiling by high throughput sequencing
Platform:
GPL9058
12 Samples
Download data: BED, BEDGRAPH
Series
Accession:
GSE18068
ID:
200018068
3.

Drosophila at different time points of development: ChIP-chip, ChIP-seq, RNA-seq

(Submitter supplied) This is a dataset generated by the Drosophila Regulatory Elements modENCODE Project led by Kevin P. White at the University of Chicago. It contains ChIP-chip data on Agilent 244K dual-color arrays for 6 Histone modifications (H3K9me3, H3K27me3, H3K4me3, H3K4me1, H3K27Ac, H3K9Ac), PolII and CBP/p300. Each factor has been studied for 12 different time-points of Drosophila development. For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODEDataReleasePolicyFinal2008.pdf This SuperSeries is composed of the SubSeries listed below.
Organism:
Drosophila melanogaster
Type:
Genome binding/occupancy profiling by genome tiling array; Genome binding/occupancy profiling by high throughput sequencing; Expression profiling by high throughput sequencing
4 related Platforms
936 Samples
Download data: BED, BEDGRAPH, TXT
4.

Illumina Genome Analyzer (Drosophila melanogaster)

Organism:
Drosophila melanogaster
467 Series
1850 Samples
Download data
Platform
Accession:
GPL9058
ID:
100009058
5.

AdultMale_combined_RNAseq_1, 2

Organism:
Drosophila melanogaster
Source name:
AdultMale
Platform:
GPL9058
Series:
GSE15292 GSE18068 GSE18572
Download data: BED, BEDGRAPH
Sample
Accession:
GSM451804
ID:
300451804
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