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| Status |
Public on Mar 18, 2009 |
| Title |
Agilent-019182 Drosophila melanogaster Whole Genome ChIP-on-Chip Set 244K, Microarray 1 of 3 |
| Technology type |
in situ oligonucleotide |
| Distribution |
custom-commercial |
| Organism |
Drosophila melanogaster |
| Manufacturer |
Agilent Technologies |
| Manufacture protocol |
see manufacturer's web site at http://www.agilent.com/
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| |
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| Contributor(s) |
White KP, Negre NN, Shah PK |
| Submission date |
Jun 10, 2008 |
| Last update date |
Aug 19, 2013 |
| Contact name |
Kevin P. White |
| E-mail(s) |
kpwhite@uchicago.edu
|
| Organization name |
University of Chicago
|
| Department |
Institute for Genomics and Systems Biology
|
| Street address |
900 E. 57th STR. 10th FL.
|
| City |
Chicago |
| State/province |
IL |
| ZIP/Postal code |
60615 |
| Country |
USA |
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| Samples (297)
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GSM382158, GSM382159, GSM382160, GSM384690, GSM384691, GSM384692
GSM384723, GSM384724, GSM384725, GSM384732, GSM384733, GSM384734, GSM384741, GSM384742, GSM384743, GSM384750, GSM384751, GSM384752, GSM384760, GSM384761, GSM384762, GSM384769, GSM384770, GSM384771, GSM384778, GSM384779, GSM384780, GSM384787, GSM384788, GSM384789, GSM384797, GSM384798, GSM384799, GSM384807, GSM384808, GSM384809, GSM384817, GSM384818, GSM384819, GSM384826, GSM384827, GSM384828, GSM384839, GSM384840, GSM384841, GSM385341, GSM385342, GSM385343, GSM385397, GSM385398, GSM385399, GSM386032, GSM386033, GSM386034, GSM386042, GSM386043, GSM386044, GSM386051, GSM386052, GSM386053, GSM386060, GSM386061, GSM386062, GSM386069, GSM386070, GSM386071, GSM386088, GSM386089, GSM386090, GSM386097, GSM386098, GSM386099, GSM386106, GSM386107, GSM386108, GSM386115, GSM386116, GSM386117, GSM386125, GSM386126, GSM386127, GSM386138, GSM386139, GSM386140, GSM386148, GSM386149, GSM386150, GSM386158, GSM386159, GSM386160, GSM386168, GSM386169, GSM386170, GSM386179, GSM386180, GSM386181, GSM386216, GSM386217, GSM386218, GSM386269, GSM386270, GSM386271, GSM386279, GSM386280, GSM386281, GSM386334, GSM386335, GSM386336, GSM386996, GSM386997, GSM386998, GSM418207, GSM418208, GSM418209, GSM418216, GSM418217, GSM418218, GSM418225, GSM418226, GSM418227, GSM418239, GSM418240, GSM418241, GSM418254, GSM418255, GSM418256, GSM418275, GSM418276, GSM418277, GSM418290, GSM418291, GSM418292, GSM418309, GSM418310, GSM418311, GSM418318, GSM418319, GSM418320, GSM418335, GSM418336, GSM418337, GSM418454, GSM418455, GSM418456, GSM418463, GSM418464, GSM418465, GSM418501, GSM418502, GSM418503, GSM418514, GSM418515, GSM418516, GSM418549, GSM418550, GSM418551, GSM418567, GSM418568, GSM418569, GSM418580, GSM418581, GSM418582, GSM418593, GSM418594, GSM418595, GSM441405, GSM441406, GSM441411, GSM441412, GSM441413, GSM441420, GSM441421, GSM441422, GSM441437, GSM441438, GSM441439, GSM441446, GSM441447, GSM441448, GSM441933, GSM441934, GSM441935, GSM441943, GSM441944, GSM441945, GSM441984, GSM441985, GSM441986, GSM441995, GSM441996, GSM441997, GSM442006, GSM442007, GSM442008, GSM442224, GSM442227, GSM442230, GSM442233, GSM442234, GSM442235, GSM442242, GSM442245, GSM442248, GSM442251, GSM442254, GSM442257, GSM442260, GSM442263, GSM442266, GSM442269, GSM442272, GSM442275, GSM442278, GSM442281, GSM442284, GSM442287, GSM442290, GSM442293, GSM442296, GSM442299, GSM442302, GSM442305, GSM442308, GSM442311, GSM442314, GSM442317, GSM442320, GSM442323, GSM442326, GSM442327, GSM442328, GSM442335, GSM442338, GSM442341, GSM442344, GSM442347, GSM442350, GSM442353, GSM442356, GSM442359, GSM442362, GSM442365, GSM442368, GSM442371, GSM442374, GSM442377, GSM442380, GSM442381, GSM442382, GSM442389, GSM442392, GSM442395, GSM442398, GSM442401, GSM442404, GSM442407, GSM442410, GSM442413, GSM442416, GSM442419, GSM442422, GSM442425, GSM442428, GSM442431, GSM443110, GSM443113, GSM443116, GSM443119, GSM443122, GSM443125, GSM637601, GSM637604, GSM637607, GSM637608, GSM637611, GSM637614, GSM637617, GSM637620, GSM637623, GSM637628, GSM637631, GSM637634, GSM637636, GSM637639, GSM637642, GSM637649, GSM637652, GSM637655, GSM637657, GSM637660, GSM637663, GSM637665, GSM637668, GSM637671, GSM699252, GSM699255, GSM699258
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| Series (19)
|
| GSE15292 |
Drosophila at different time points of development: ChIP-chip, ChIP-seq, RNA-seq |
| GSE15422 |
ChIP-chip of H3K9me3 in Drosophila at different time points of development |
| GSE15423 |
ChIP-chip of H3K27me3 in Drosophila at different time points of development |
| GSE15424 |
ChIP-chip of H3K4me3 in Drosophila at different time points of development |
| GSE15425 |
ChIP-chip of H3K4me1 in Drosophila at different time points of development |
| GSE15426 |
ChIP-chip of H3K9Ac in Drosophila at different time points of development |
| GSE15427 |
ChIP-chip of CBP/p300 in Drosophila at different time points of development |
| GSE15430 |
ChIP-chip of H3K27Ac in Drosophila at different time points of development |
| GSE16702 |
ChIP-chip of PolII in Drosophila at different time points of development |
| GSE18572 |
Discrete genomic domains exhibit co-occurrence of H3K9me3 and H3K27me3 histone modifications throughout Drosophila |
| GSE25946 |
AdultMale-H3K27me3 |
| GSE25947 |
E16-20_H3K9Ac |
| GSE25948 |
AdultFemale_H3K9Me3 |
| GSE25949 |
AdultFemale_H3K9Ac |
| GSE25950 |
E8-12_CBP_Set2 |
| GSE25952 |
E12-16_PolII ChIP-chip |
| GSE25953 |
E0-4_H3K27Ac set2 ChIP-chip |
| GSE25954 |
E0-4_H3K9Me3-Set2 ChIP-chip |
| GSE28249 |
E0-4_H3K4Me3 |
|
| Data table header descriptions |
| ID |
|
| COL |
Column |
| ROW |
Row |
| SPOT ID |
Spot identifier |
| CONTROL_TYPE |
Control type |
| CHROMOSOMAL_LOCATION |
Chromosomal location (+ strand); based on UCSC Dm2 April 2004 genome |
| chromosome |
|
| RANGE_GB |
|
| RANGE_START |
|
| RANGE_END |
|
| SPOT_ID |
|
| Data table |
| ID |
COL |
ROW |
SPOT ID |
CONTROL_TYPE |
CHROMOSOMAL_LOCATION |
chromosome |
RANGE_GB |
RANGE_START |
RANGE_END |
SPOT_ID |
| 243504 |
1 |
1 |
DmCGHBrightCorner |
pos |
|
|
|
|
|
CONTROL |
| 242592 |
2 |
1 |
DmCGHBrightCorner |
pos |
|
|
|
|
|
CONTROL |
| 241680 |
3 |
1 |
DarkCorner |
pos |
|
|
|
|
|
CONTROL |
| 240768 |
4 |
1 |
DarkCorner |
pos |
|
|
|
|
|
CONTROL |
| 239856 |
5 |
1 |
A_82_P00256398 |
false |
chr2R:007606652-007606711 |
chr2R |
AE013599.3 |
7606652 |
7606711 |
|
| 238944 |
6 |
1 |
A_82_P00139022 |
false |
chr2L:015297550-015297600 |
chr2L |
AE014134.4 |
15297550 |
15297600 |
|
| 238032 |
7 |
1 |
A_82_P00056063 |
false |
chr2L:005843475-005843534 |
chr2L |
AE014134.4 |
5843475 |
5843534 |
|
| 237120 |
8 |
1 |
A_82_P00291356 |
false |
chr2R:011606790-011606849 |
chr2R |
AE013599.3 |
11606790 |
11606849 |
|
| 236208 |
9 |
1 |
A_82_P00180451 |
false |
chr2L:020055155-020055201 |
chr2L |
AE014134.4 |
20055155 |
20055201 |
|
| 235296 |
10 |
1 |
A_82_P00194662 |
false |
chr2L:021923445-021923495 |
chr2L |
AE014134.4 |
21923445 |
21923495 |
|
| 234384 |
11 |
1 |
A_82_P00047808 |
false |
chr2L:004914434-004914493 |
chr2L |
AE014134.4 |
4914434 |
4914493 |
|
| 233472 |
12 |
1 |
A_82_P00302243 |
false |
chr2R:012838039-012838083 |
chr2R |
AE013599.3 |
12838039 |
12838083 |
|
| 232560 |
13 |
1 |
A_82_P00169637 |
false |
chr2L:018798400-018798459 |
chr2L |
AE014134.4 |
18798400 |
18798459 |
|
| 231648 |
14 |
1 |
A_82_P00119424 |
false |
chr2L:013069483-013069542 |
chr2L |
AE014134.4 |
13069483 |
13069542 |
|
| 230736 |
15 |
1 |
A_82_P00130118 |
false |
chr2L:014288350-014288395 |
chr2L |
AE014134.4 |
14288350 |
14288395 |
|
| 229824 |
16 |
1 |
A_82_P00020809 |
false |
chr2L:001849949-001850006 |
chr2L |
AE014134.4 |
1849949 |
1850006 |
|
| 228912 |
17 |
1 |
A_82_P00182506 |
false |
chr2L:020370501-020370560 |
chr2L |
AE014134.4 |
20370501 |
20370560 |
|
| 228000 |
18 |
1 |
A_82_P00012937 |
false |
chr2L:000939332-000939376 |
chr2L |
AE014134.4 |
939332 |
939376 |
|
| 227088 |
19 |
1 |
A_82_P00022090 |
false |
chr2L:001991627-001991686 |
chr2L |
AE014134.4 |
1991627 |
1991686 |
|
| 226176 |
20 |
1 |
A_82_P00323188 |
false |
chr2R:015216819-015216878 |
chr2R |
AE013599.3 |
15216819 |
15216878 |
|
Total number of rows: 243504
Table truncated, full table size 22524 Kbytes.
| Supplementary file |
Size |
Download |
File type/resource |
| GPL6949_sequences.txt.gz |
5.3 Mb |
(ftp)(http) |
TXT |
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