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Items: 4

1.

IGH analysis in pro-B cells with H3K4me3, H3K4me2, H3K9ac, H3K27me3, Pax5 and CTCF

(Submitter supplied) This SuperSeries is composed of the SubSeries listed below.
Organism:
Mus musculus
Type:
Genome binding/occupancy profiling by genome tiling array; Genome binding/occupancy profiling by high throughput sequencing
Platforms:
GPL9185 GPL13123
16 Samples
Download data: BED, PAIR
Series
Accession:
GSE27215
ID:
200027215

PubMed Full text in PMC Similar studies Analyze with GEO2R

2.

IGH analysis in pro-B cells with H3K4me3, H3K4me2, H3K9ac, H3K27me3, Pax5 and CTCF [ChIP-chip]

(Submitter supplied) VH-DJH recombination of the immunoglobulin heavy-chain (Igh) locus is temporally and spatially controlled during early B-cell development, and yet no regulatory elements other than the VH gene promoters have been identified throughout the entire 2.5-Mb VH gene cluster. Here we discovered novel regulatory sequences that are interspersed in the distal VH gene region. These conserved repeat elements were characterized by the presence of Pax5-dependent active chromatin, the binding of Pax5, E2A, CTCF and Rad21 as well as by Pax5-dependent antisense transcription in pro-B cells. more...
Organism:
Mus musculus
Type:
Genome binding/occupancy profiling by genome tiling array
Platform:
GPL13123
12 Samples
Download data: PAIR
Series
Accession:
GSE27074
ID:
200027074

PubMed Full text in PMC Similar studies Analyze with GEO2R

3.

NimbleGen_GenAu MB BCELL v5.0

(Submitter supplied) Custom array. genomic regions of potential pax5 target genes from mm8 including IGH and surrounding genes isothermal tiling oligos at 100bp designname: 2007-06-28_imp_igh_2_ChIP designid: 6006 Protocol: as described in www.nimblegen.com
Organism:
Mus musculus
3 Series
35 Samples
Download data: NDF, POS
Platform
Accession:
GPL13123
ID:
100013123

4.

GenAu MB BCELL v5.0 H3K4me2 Pax5-/- Rag2-/-

Organism:
Mus musculus
Source name:
H3K4me2 ChIP DNA from Pax5-/- Rag2-/- pro-B cells (channel 1) Input DNA from Pax5-/- Rag2-/- pro-B cells (channel 2)
Platform:
GPL13123
Series:
GSE27074 GSE27215
Download data: PAIR
Sample
Accession:
GSM668139
ID:
300668139

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