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GEO DataSets

Functional Genomics Studies

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Items: 3

Select item 2002619691.

Spatial transcriptomics of the Rhesus Macaque Hippocampus during homeostasis and chronic SIV CL757 infection

(Submitter supplied) We performed spatial transcriptomics using Nanostring's DSP platform on Rhesus Macaque Hippocampal Brain sections obtained from one uninfected control and one chronically infected with SIVCL757. Our goals were to (1) determine which differentially expressed genes (DGEs) could be attributed to SIV infection in the rhesus hippocampus, (2) determine if spatial transcriptomics could serve as a tool to identify leukocyte infiltrates in the SIV infected brain and (3) examine localization of leukocytes at homeostatasis and chronic SIV infection

Organism:: Macaca mulatta

Type:: Expression profiling by high throughput sequencing

Platform:: GPL27943
48 Samples

Download data: DCC

Series

Accession:: GSE261969

ID:: 200261969

PubMed Full text in PMC Similar studies

Select item 1000279432.

Illumina NovaSeq 6000 (Macaca mulatta)

Organism:: Macaca mulatta

139 Series
12866 Samples

Platform

Accession:: GPL27943

ID:: 100027943

Select item 3081553293.

PFA 33980 | 006 | Full ROI

Organism:: Macaca mulatta

Source name:: Brain - Hippocampus

Platform:: GPL27943
Series:: GSE261969

Download data: DCC

Sample

Accession:: GSM8155329

ID:: 308155329

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GSM8155329[Accession] (3)
GEO DataSets
1668456[uid] (1)
Taxonomy
MULTISPECIES: translation initiation factor IF-3 [Bacillus]
MULTISPECIES: translation initiation factor IF-3 [Bacillus]
gi|499189051|ref|WP_010886591.1|

Protein
Taxonomy Links for Nucleotide (Select 1785188404) (1)
Taxonomy
Small ruminant lentivirus strain 33853.70 gag polyprotein (gag) gene, partial cd...
Small ruminant lentivirus strain 33853.70 gag polyprotein (gag) gene, partial cds
gi|2245987643|gb|OK325571.1|

Nucleotide

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