Similar studies for GEO DataSets (Select 200019521) - GEO DataSets

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Items: 20

Select item 2000195211.

SuperSeries for the analysis of transcriptional regulation by Thermus themophilus CsoR (TTHA1719)

(Submitter supplied) We observed the copper response of Thermus thermophilus HB8 wild-type and csoR deficient strain at 0 and 30 min after the addition of 1.25 mM CuSO4, and zinc response of T. thermophilus HB8 wild-type strain at 0 and 30 min after the addition of 1.0 mM ZnSO4. This SuperSeries is composed of the SubSeries listed below.

Organism:: Thermus thermophilus HB8

Type:: Expression profiling by array

Platform:: GPL9209
18 Samples

Download data: CEL

Series

Accession:: GSE19521

ID:: 200019521

Select item 2000209002.

Differential expression analysis of Thermus thermophilus HB8 wild-type strain in response to zinc

(Submitter supplied) We observed the expression profile of the total mRNA in Thermus thermophilus HB8 wild-type strain at 0 and 30 min after the addition of ZnSO4.

Organism:: Thermus thermophilus HB8

Type:: Expression profiling by array

Platform:: GPL9209
6 Samples

Download data: CEL

Series

Accession:: GSE20900

ID:: 200020900

Select item 2000195093.

Differential expression analysis of T. thermophilus HB8 csoR deficient strain in response to copper.

(Submitter supplied) We observed the expression profile of the total mRNA in Thermus thermophilus HB8 csrR deficient strain at 0 and 30 min after the addition of CuSO4.

Organism:: Thermus thermophilus HB8

Type:: Expression profiling by array

Platform:: GPL9209
6 Samples

Download data: CEL

Series

Accession:: GSE19509

ID:: 200019509

Select item 2000195084.

Differential expression analysis of T. thermophilus HB8 wild-type strain in response to copper.

(Submitter supplied) We observed the expression profile of the total mRNA in Thermus thermophilus HB8 wild-type strain at 0 and 30 min after the addition of CuSO4.

Organism:: Thermus thermophilus HB8

Type:: Expression profiling by array

Platform:: GPL9209
6 Samples

Download data: CEL

Series

Accession:: GSE19508

ID:: 200019508

Select item 2000241845.

Comparative expression analysis between TTHA0101-deficient mutant and wild-type of Thermus thermophilus HB8

(Submitter supplied) We observed the expression profile of the total mRNA of TTHA0101 deletion mutant of Thermus thermophilus HB8 strain grown in a rich (TT) medium at 70°C compared with that of wild type.

Organism:: Thermus thermophilus HB8

Type:: Expression profiling by array

Platform:: GPL9209
7 Samples

Download data: CEL

Series

Accession:: GSE24184

ID:: 200024184

Select item 2000369126.

SuperSeries for the study of expression analysis of the PfmR (TTHB023) in T. thermophilus HB8

(Submitter supplied) This SuperSeries is composed of the SubSeries listed below.

Organism:: Thermus thermophilus HB8

Type:: Expression profiling by array

Platform:: GPL9209
40 Samples

Download data: CEL

Series

Accession:: GSE36912

ID:: 200036912

PubMed Full text in PMC Similar studies Analyze with GEO2R

Select item 2000369097.

Comparative expression analysis between PfmR (TTHB023) deletion mutant and wild-type of Thermus thermophilus HB8

(Submitter supplied) We observed the expression profile of the total mRNA of PfmR (TTHB023) deletion mutant of Thermus thermophilus HB8 strain grown in a rich (TT) medium at 70°C compared with that of wild type.

Organism:: Thermus thermophilus HB8

Type:: Expression profiling by array

Platform:: GPL9209
10 Samples

Download data: CEL

Series

Accession:: GSE36909

ID:: 200036909

PubMed Full text in PMC Similar studies Analyze with GEO2R

Select item 2000368848.

Expression profile of wild-type Thermus thermophilus HB8 strain cultured in TT medium for 6 h, reproduced in 2011

(Submitter supplied) We observed the expression profile of the total mRNA of the wild-type strain grown in a rich medium at 70 deg-C for 360 min.

Organism:: Thermus thermophilus HB8

Type:: Expression profiling by array

Platform:: GPL9209
4 Samples

Download data: CEL

Series

Accession:: GSE36884

ID:: 200036884

PubMed Full text in PMC Similar studies Analyze with GEO2R

Select item 2000368839.

Expression profile of wild-type Thermus thermophilus HB8 strain cultured in TT medium for 6 h, reproduced in 2010

(Submitter supplied) We observed the expression profile of the total mRNA of the wild-type strain grown in a rich medium at 70 deg-C for 360 min.

Organism:: Thermus thermophilus HB8

Type:: Expression profiling by array

Platform:: GPL9209
3 Samples

Download data: CEL

Series

Accession:: GSE36883

ID:: 200036883

PubMed Full text in PMC Similar studies Analyze with GEO2R

Select item 20003688110.

Expression profile of PfmR (TTHB023)-deficient Thermus thermophilus HB8 strain

(Submitter supplied) In order to find function of PfmR protein from T. thermophilus HB8, we observed the expression profile of the total mRNA of the PfmR-deficient strain grown in a rich medium at 70°C for 360 min.

Organism:: Thermus thermophilus HB8

Type:: Expression profiling by array

Platform:: GPL9209
3 Samples

Download data: CEL

Series

Accession:: GSE36881

ID:: 200036881

PubMed Full text in PMC Similar studies Analyze with GEO2R

Select item 20002129011.

Time course of the mRNA expression in wild-type Thermus thermophilus HB8 strain grown in a rich medium (labeling:Affymetrix)

(Submitter supplied) In order to observe altered expression profile of wild-type T. thermophilus HB8 strain grown in a rich (TT) medium at 70°C. we analyzed time-dependent mRNA expression profile of the total mRNA from the strain, which corresponds the logarithmic phase to the early stationary phase.

Organism:: Thermus thermophilus HB8

Type:: Expression profiling by array

Platform:: GPL9209
30 Samples

Download data: CEL

Series

Accession:: GSE21290

ID:: 200021290

PubMed Full text in PMC Similar studies Analyze with GEO2R

Select item 20004686812.

Differential expression analysis of T. thermophilus HB8 wild-type strain in response to addition of silicic acid and removal of iron.

(Submitter supplied) We observed the expression profile of the total mRNA in Thermus thermophilus HB8 wild-type strain at 60 min after the addition of silicic acid and removal of iron.

Organism:: Thermus thermophilus HB8

Type:: Expression profiling by array

Platform:: GPL4902
9 Samples

Download data: CEL, CHP

Series

Accession:: GSE46868

ID:: 200046868

PubMed Full text in PMC Similar studies Analyze with GEO2R

Select item 20001054813.

SuperSeries for the study of expression analysis of the T. thermophilus sigE (TTHB211) and anti-sigE (TTHB212)

(Submitter supplied) This SuperSeries is composed of the SubSeries listed below.

Organism:: Thermus thermophilus HB8

Type:: Expression profiling by array

Platform:: GPL4902
12 Samples

Download data: CEL

Series

Accession:: GSE10548

ID:: 200010548

Select item 20001037114.

Comparative expression analysis between TTHB212 deletion mutant and wild-type of T. thermophilus HB8

(Submitter supplied) We observed the expression profile of the total mRNA of TTHB212 deletion mutant of Thermus thermophilus HB8 strain grown in a rich (TR) medium at 70°C compared with that of wild type. Keywords: cell type comparison

Organism:: Thermus thermophilus HB8

Type:: Expression profiling by array

Platform:: GPL4902
6 Samples

Download data: CEL

Series

Accession:: GSE10371

ID:: 200010371

Select item 20000717515.

SuperSeries for the study of expression analysis of the T. thermophilus CRP (TTHA1437)

(Submitter supplied) This SuperSeries is composed of the SubSeries listed below.

Organism:: Thermus thermophilus HB8

Type:: Expression profiling by array

Platform:: GPL4902
41 Samples

Download data: CEL

Series

Accession:: GSE7175

ID:: 200007175

PubMed Full text in PMC Similar studies Analyze with GEO2R

Select item 20000716616.

Comparative expression analysis between CRP (TTHA1437) deletion mutant and wild-type of T. thermophilus HB8

(Submitter supplied) We observed the expression profile of the total mRNA of crp (TTHA1437) deletion mutant of Thermus thermophilus HB8 strain grown in a rich (TT) medium at 70oC compared with that of wild type. Keywords: cell type comparison

Organism:: Thermus thermophilus HB8

Type:: Expression profiling by array

Platform:: GPL4902
12 Samples

Download data: CEL

Series

Accession:: GSE7166

ID:: 200007166

PubMed Full text in PMC Similar studies Analyze with GEO2R

Select item 20000716517.

Time course of the mRNA expression in wild-type Thermus thermophilus HB8 strain grown on a rich medium (labeling:ENZO)

(Submitter supplied) We observed the expression profile of the total mRNA of wild-type Thermus thermophilus HB8 strain grown in a rich (TT) medium at 70oC. Keywords: time course

Organism:: Thermus thermophilus HB8

Type:: Expression profiling by array

Platform:: GPL4902
30 Samples

Download data: CEL

Series

Accession:: GSE7165

ID:: 200007165

PubMed Full text in PMC Similar studies Analyze with GEO2R

Select item 20007432318.

CsoR is essential for maintaining copper homeostasis in Mycobacterium tuberculosis

(Submitter supplied) Purpose: CsoR, a copper responsive negative regulator of Mycobacterium tuberculosis has been shown to respond to copper and bind to its own regulon in in vitro experiments. Here we examine the role of CsoR in vivo by examining the impact of deletion of csoR on the host transcriptome. Methods: csoR was knocked out of M. tuberculosis H37Rv using the specialized transduction method developed by Bardarov et al (2002), followed by removal of the hygromycin marker with plasmid pYUB870. more...

Organism:: Mycobacterium tuberculosis

Type:: Expression profiling by high throughput sequencing

Platform:: GPL18768
4 Samples

Download data: TXT

Series

Accession:: GSE74323

ID:: 200074323

PubMed Full text in PMC Similar studies SRA Run Selector

Select item 20002150619.

The metalloregulatory site in Streptococcus pneumoniae AdcR, a zinc-activated MarR-family repressor

(Submitter supplied) Streptococcus pneumoniae D39 AdcR (adhesion competence repressor) is the first metal-sensing member of the MarR (multiple antibiotic resistance repressor) family to be characterized. Expression profiling of a ∆adcR strain grown in liquid culture under microaerobic conditions revealed that transcript amounts for 13 genes were up-regulated relative to the wild-type strain, among them adcR, adcCBA, encoding a high affinity ABC uptake system for zinc, and genes encoding cell-surface zinc-binding pneumococcal histidine triad (pht) and adcII (lmb, laminin binding) proteins. more...

Organism:: Streptococcus pneumoniae

Type:: Expression profiling by array

Platform:: GPL536
3 Samples

Download data: GPR

Series

Accession:: GSE21506

ID:: 200021506

PubMed Full text in PMC Similar studies Analyze with GEO2R

Select item 20003917620.

A new structural paradigm in copper resistance in a human pathogen

(Submitter supplied) Copper is essential for both innate and adaptive immune function and copper resistance has emerged as an important determinant of virulence of microbial pathogens. In the human pathogen Streptococcus pneumoniae (Spn), cytoplasmic copper resistance is mediated by an operon encoding the copper-responsive repressor CopY, CupA, of unknown function, and CopA, a copper effluxing P1B-type ATPase. We show that CupA is a novel cell membrane-anchored Cu(I) chaperone for CopA, and that a Cu(I)-binding competent, membrane-localized CupA, like CopA, is obligatory for copper resistance.