Similar studies for GEO DataSets (Select 200030949) - GEO DataSets

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Items: 13

Select item 2000309491.

E. faecalis transcriptional responses to copper stress

(Submitter supplied) Transcriptional profiling of Enterococcus faecalis V583 comparing the transcriptome of cells grown in M17 + glucose 0.5% (GM17) with the transcriptome of cells grown in M17 + glucose 0.5% + 0.05 mM CuSO4

Organism:: Enterococcus faecalis V583; Enterococcus faecalis

Type:: Expression profiling by array

Platform:: GPL13826
3 Samples

Download data: GPR

Series

Accession:: GSE30949

ID:: 200030949

PubMed Full text in PMC Similar studies Analyze with GEO2R

Select item 2000309482.

E. faecalis transcriptional responses to manganese stress

Organism:: Enterococcus faecalis; Enterococcus faecalis V583

Type:: Expression profiling by array

Platform:: GPL13826
3 Samples

Download data: GPR

Series

Accession:: GSE30948

ID:: 200030948

PubMed Full text in PMC Similar studies Analyze with GEO2R

Select item 2000309473.

E. faecalis transcriptional responses to zinc stress

Organism:: Enterococcus faecalis; Enterococcus faecalis V583

Type:: Expression profiling by array

Platform:: GPL13826
3 Samples

Download data: GPR

Series

Accession:: GSE30947

ID:: 200030947

PubMed Full text in PMC Similar studies Analyze with GEO2R

Select item 2000336984.

Enterococcus faecalis EfaR mutant transcriptome profile

(Submitter supplied) Metal ions are important cofactors of inumerous enzymes and can interfere in many biological processes. Manganese is a particularly relevant metal as it is also involved in protection from oxidative stress and several Mn-dependent regulators have been shown to have a role in bacterial pathogenicity. A putative DNA-binding motif, here called efa motif was discovered in the promoter regions of genes previously shown to be differentially expressed in the presence of excess zinc, manganese and copper ions. more...

Organism:: Enterococcus faecalis; Enterococcus faecalis V583

Type:: Expression profiling by array

Platform:: GPL13826
1 Sample

Download data: GPR, TXT

Series

Accession:: GSE33698

ID:: 200033698

PubMed Full text in PMC Similar studies Analyze with GEO2R

Select item 2000344325.

Transcriptomic response of Enterococcus faecalis to iron excess

(Submitter supplied) To further investigate the homeostatic response of E. faecalis to Fe exposure, we examine the whole-genome transcriptional response of wild-type (WT) exposed to non toxic Fe excess. This experiment correspond the work titled Transcriptomic response of Enterococcus faecalis to iron excess (work in preparation)

Organism:: Enterococcus faecalis V583; Enterococcus faecalis OG1RF

Type:: Expression profiling by array

Platform:: GPL10089
4 Samples

Download data: TXT

Series

Accession:: GSE34432

ID:: 200034432

Select item 2000204536.

Global transcriptional response to copper of Enterococcus faecalis wild-type and copY mutant

(Submitter supplied) We examined the whole-genome transcriptional response of E. faecalis wild-type (WT) and copy mutant cells exposed to non toxic Cu excess. The analysis was focused in those genes which changed significantly their expression levels in the Cu-treated cells when compared to their untreated counterparts. The results indicated that after 3 h at 0.5 mM CuSO4, WT cells exhibited a significant increment of Cu content and the induction of three genes of cop operon along with other 142 genes. more...

Organism:: Enterococcus faecalis OG1RF; Enterococcus faecalis V583

Type:: Expression profiling by array

Platform:: GPL10089
8 Samples

Download data: TXT

Series

Accession:: GSE20453

ID:: 200020453

Select item 2000584677.

Genome-wide Analysis of Enterococcus faecalis OG1RF(pCF10) Gene Expression During Infection

(Submitter supplied) Changes in Enterococcus faecalis OG1RF(pCF10) gene expression at 4 hours post-infection in a rabbit model of subdermal abscess formation were studied using RNA-seq analysis.

Organism:: Enterococcus faecalis

Type:: Expression profiling by high throughput sequencing

Platform:: GPL18799
2 Samples

Download data: TXT

Series

Accession:: GSE58467

ID:: 200058467

PubMed Full text in PMC Similar studies SRA Run Selector

Select item 2000223918.

Genome-wide Analysis of Enterococcus faecalis OG1RF Gene Expression During Infection

(Submitter supplied) Changes in Enterococcus faecalis OG1RF gene expression during infection in a rabbit model of subdermal abscess formation were studied using microarray analysis.

Organism:: Enterococcus faecalis OG1RF; Enterococcus faecalis V583

Type:: Expression profiling by array

Platform:: GPL10534
12 Samples

Download data: TXT

Series

Accession:: GSE22391

ID:: 200022391

PubMed Full text in PMC Similar studies Analyze with GEO2R

Select item 2000275109.

The Two-component Signal Transduction System CopRS of Corynebacterium glutamicum is Required for Adaptation to Copper-excess Stress

(Submitter supplied) Copper is an essential cofactor for many enzymes but at high concentrations it is toxic for the cell. Copper ion concentrations ≥50 µM inhibited growth of Corynebacterium glutamicum. The transcriptional response to 20 µM Cu2+ was studied using DNA microarrays and revealed 26 genes that showed a ≥3-fold increased mRNA level, including cg3280-cg3289. Several genes in this genomic region code for proteins presumably involved in the adaption to copper-induced stress, e. more...

Organism:: Corynebacterium glutamicum ATCC 13032

Type:: Expression profiling by array

Platform:: GPL9860
9 Samples

Download data: GPR

Series

Accession:: GSE27510

ID:: 200027510

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Select item 20004513110.

Enterococcus faecalis reconfigure the activation of its transcriptional regulatory networks under different copper exposure levels

(Submitter supplied) The microarrays experiments was performed with the purpose of identify transcriptional networks activated by copper. This experiment correspond the work tituled Enterococcus faecalis reconfigure the activation of its transcriptional regulatory networks under different copper exposure levels (work in preparation).Mauricio Latorrea,b, Jessica Galloway-Peñac,d,e, Jung Hyeo Rhoc,d, Marko Budinichf, Barbara E. more...

Organism:: Enterococcus faecalis V583; Enterococcus faecalis OG1RF

Type:: Expression profiling by array

Platform:: GPL10089
8 Samples

Download data: CALLS, PAIR

Series

Accession:: GSE45131

ID:: 200045131

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Select item 20011500911.

Transcriptome mapping of Enterococcus faecalis and Enterococcus faecium

(Submitter supplied) The enterococci comprise a genus of 49 low-GC content Gram-positive commensal species within the Firmicutes phylum that are known to occupy diverse habitats, notably the gastrointestinal core microbiota of nearly every phylum, including human. Of particular clinical relevance are two rogue species of enterococci, Enterococcus faecalis and the distantly related Enterococcus faecium, standing among the nefarious multi-drug resistant and hospital-acquired pathogens. more...

Organism:: Enterococcus faecalis V583; Enterococcus faecium Aus0004

Type:: Expression profiling by high throughput sequencing

Platforms:: GPL25048 GPL25049
12 Samples

Download data: WIG

Series

Accession:: GSE115009

ID:: 200115009

PubMed Full text in PMC Similar studies SRA Run Selector

Select item 20013695312.

Transcriptome profiling of tdc and agdi clusters deletion mutant of Enterococcus faecalis V583.

(Submitter supplied) The aim was to study the transcriptional profiling of the tdc and agdi clusters delection mutant E. faecalis V583 ΔtdcΔagdi (non-tyramine non-putrescine producer) compared to the wild type strain E. faecalis V583 (tyramine producer). We compared the expression profile of the strains grown in M17 medium with glucose as carbon source and suplemented with tyrosine.

Organism:: Enterococcus faecalis V583; Enterococcus faecalis

Type:: Expression profiling by array

Platform:: GPL21449
3 Samples

Download data: GPR

Series

Accession:: GSE136953

ID:: 200136953

PubMed Full text in PMC Similar studies Analyze with GEO2R

Select item 20019107613.

Transcriptomics and functional analysis of copper stress response in the sulfate-reducing bacteria Desulfovibrio alaskensis G20

(Submitter supplied) Copper (Cu) is an essential micronutrient required as a co-factor in the catalytic center of many enzymes in bacteria. However, excess Cu is hazardous and can generate pleiotropic effects. Cu has been the metal of choice for piping used in household water distribution systems. Due to its leaching from pipelines, Cu is present at an elevated concentration in groundwater and in soil which is of public health concern. more...