GEO DataSets

(Submitter supplied) Based on sensorial analysis, 8 apple genotypes with contrasted fruit texture for mealiness were selected among a progeny. Apple samples were collected at 60 days after flowering (60DAF), 110 days after flowering (110DAF), harvest (Rec), and after 1 or 2 months of cold storage (1M and 2M respectively).

Organism:

Malus domestica

Type:

Expression profiling by array

Platform:

GPL16374

152 Samples

Download data: PAIR

(Submitter supplied) Based on sensorial analysis over 2 years, 12 apple varieties and 4 hybrides with contrasted fruit texture were selected for transcriptionnal analyses over 4 months of cold storage (harvest, 1 month, 2 and 4 months).

Organism:

Malus domestica

Type:

Expression profiling by array

Platform:

GPL16374

192 Samples

Download data: PAIR, TXT

(Submitter supplied) Based on sensorial analysis over 4 years, 6 apple genotypes with contrasted fruit texture (mealy or not) were selected among a progeny. Apple samples were collected at 100 days after flowering (100 DAF), harvest (H), after 2 and 4 months of cold storage (60DAH and 120DAH respectively).

Organism:

Malus domestica

Type:

Expression profiling by array

Platform:

GPL16374

60 Samples

Download data: PAIR

(Submitter supplied) This SuperSeries is composed of the SubSeries listed below.

Organism:

Malus domestica

Type:

Expression profiling by array

Platforms:

GPL21528 GPL21529

66 Samples

Download data: PAIR, TXT

(Submitter supplied) Apple (Malus x domestica Borkh.) is a model fruit species to study the metabolic changes occurring at the onset of ripening as well the physiological mechanism governed by the hormone ethylene. In this survey, to dissect the climacteric interplay in apple, a multidisciplinary approach was employed. To this end, a comprehensive analysis of gene expression together with the investigation of several physiological entities (texture, volatilome and polyphenolic compounds) was carried out throughout fruit development and ripening. more...

Organism:

Malus domestica

Type:

Expression profiling by array

Platform:

GPL21529

48 Samples

Download data: TXT

(Submitter supplied) Apple (Malus x domestica Borkh.) is a model fruit species to study the metabolic changes occurring at the onset of ripening as well the physiological mechanism governed by the hormone ethylene. In this survey, to dissect the climacteric interplay in apple, a multidisciplinary approach was employed. To this end, a comprehensive analysis of gene expression together with the investigation of several physiological entities (texture, volatilome and polyphenolic compounds) was carried out throughout fruit development and ripening. more...

Organism:

Malus domestica

Type:

Expression profiling by array

Platform:

GPL21528

18 Samples

Download data: PAIR

(Submitter supplied) • To dissect how the genes are dynamically and differentially expressed during fruit development in sweet orange, a comprehensive transcriptomic study was performed in a pleiotropic mutant (MT) and its wild type (WT). • The detection of the fruit transcriptomic changes was conducted at five stages of fruit development by deep sequencing; the obtained millions of reliable tags were mapped on orange unigenes and subjected to cluster analysis and functional categorization. more...

Organism:

Citrus sinensis

Type:

Expression profiling by high throughput sequencing

Platform:

GPL9256

10 Samples

Download data

(Submitter supplied) Apples (Malus x domestica Borkh, Gala variety) grown in commercial orchards were harvested at maturity and maintained 2 months in cold storage with or without 1-MCP treatment.

Organism:

Malus domestica

Type:

Expression profiling by array

Platform:

GPL16374

24 Samples

Download data: PAIR

(Submitter supplied) The postharvest senescence processes of citrus fruits were analyzed transcriptomic. The present study was aimed to: further uncover the rind-flesh communication of hesperidium; characterize the differential storage behaviors of different citrus varieties; reveal the important changes during storing process; and demonstrate the specific non-climacteric characteristics of citrus fruits.

Organism:

Citrus sinensis; Citrus reticulata; Citrus unshiu; Citrus maxima

Type:

Expression profiling by array

Platform:

GPL5731

96 Samples

Download data: CEL

(Submitter supplied) To further knowledge of piglet maturity, we have developed a microarray analysis to describe biological processes and to find candidate genes for key roles in piglet maturity. The objective was to identify which genes and biological processes are specifically involved in the difference between two extreme breeds: Large White (LW) and Meishan (MS). The LW breed is a selected breed known to show an increased rate of mortality at birth, while the MS breed presents more robust piglets at birth. more...

Organism:

Sus scrofa

Type:

Expression profiling by array

Platform:

GPL16524

61 Samples

Download data: TXT

(Submitter supplied) The liver is one of most important organs in our bodies. It performs many essential functions including metabolism, synthesis, secretion, detoxification, and storage. Hepatocytes are the principal cell type in the liver and are involved in multiple liver-specific functions. There have been several efforts to develop in vitro culture systems capable of maintaining hepatocyte-specific phenotype over long time periods. more...

Organism:

Rattus norvegicus

Type:

Expression profiling by array

Platform:

GPL1355

24 Samples

Download data: CEL