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Links from GEO DataSets

Items: 12

1.

Transcriptomic and phenotypic analysis reveals new functions for the Tat pathway in Yersinia pseudotuberculosis [dtatC-vs-ip_37C-log]

(Submitter supplied) The Twin-arginine translocation (Tat) system promotes secretion of folded proteins that in bacteria are identified via an N-terminal signal peptide. Tat systems are associated with virulence in many bacterial pathogens and our previous studies revealed that Tat deficient Yersinia pseudotuberculosis was severely attenuated for virulence. However, in silico predictions did not reveal any obvious virulence factors among the potential Tat substrates encoded by Y. more...
Organism:
Yersinia pseudotuberculosis; Yersinia pseudotuberculosis IP 32953
Type:
Expression profiling by array
Platform:
GPL15095
4 Samples
Download data: TAB, TXT
Series
Accession:
GSE80530
ID:
200080530
2.

Transcriptomic and phenotypic analysis reveals new functions for the Tat pathway in Yersinia pseudotuberculosis

(Submitter supplied) This SuperSeries is composed of the SubSeries listed below.
Organism:
Yersinia pseudotuberculosis; Yersinia pseudotuberculosis IP 32953
Type:
Expression profiling by array
Platform:
GPL15095
16 Samples
Download data: TAB, TXT
Series
Accession:
GSE80532
ID:
200080532
3.

Transcriptomic and phenotypic analysis reveals new functions for the Tat pathway in Yersinia pseudotuberculosis [dtatC-vs-ip_37C-stat]

(Submitter supplied) The Twin-arginine translocation (Tat) system promotes secretion of folded proteins that in bacteria are identified via an N-terminal signal peptide. Tat systems are associated with virulence in many bacterial pathogens and our previous studies revealed that Tat deficient Yersinia pseudotuberculosis was severely attenuated for virulence. However, in silico predictions did not reveal any obvious virulence factors among the potential Tat substrates encoded by Y. more...
Organism:
Yersinia pseudotuberculosis; Yersinia pseudotuberculosis IP 32953
Type:
Expression profiling by array
Platform:
GPL15095
4 Samples
Download data: TAB, TXT
Series
Accession:
GSE80531
ID:
200080531
4.

Transcriptomic and phenotypic analysis reveals new functions for the Tat pathway in Yersinia pseudotuberculosis [dtatC-vs-ip_26C-stat]

(Submitter supplied) The Twin-arginine translocation (Tat) system promotes secretion of folded proteins that in bacteria are identified via an N-terminal signal peptide. Tat systems are associated with virulence in many bacterial pathogens and our previous studies revealed that Tat deficient Yersinia pseudotuberculosis was severely attenuated for virulence. However, in silico predictions did not reveal any obvious virulence factors among the potential Tat substrates encoded by Y. more...
Organism:
Yersinia pseudotuberculosis IP 32953; Yersinia pseudotuberculosis
Type:
Expression profiling by array
Platform:
GPL15095
4 Samples
Download data: TAB, TXT
Series
Accession:
GSE80529
ID:
200080529
5.

Transcriptomic and phenotypic analysis reveals new functions for the Tat pathway in Yersinia pseudotuberculosis [dtatC-vs-ip_26C-log]

(Submitter supplied) The Twin-arginine translocation (Tat) system promotes secretion of folded proteins that in bacteria are identified via an N-terminal signal peptide. Tat systems are associated with virulence in many bacterial pathogens and our previous studies revealed that Tat deficient Yersinia pseudotuberculosis was severely attenuated for virulence. However, in silico predictions did not reveal any obvious virulence factors among the potential Tat substrates encoded by Y. more...
Organism:
Yersinia pseudotuberculosis; Yersinia pseudotuberculosis IP 32953
Type:
Expression profiling by array
Platform:
GPL15095
4 Samples
Download data: TAB, TXT
Series
Accession:
GSE80528
ID:
200080528
6.

The pyruvate-tricarboxylic acid cycle node: a focal point of virulence control in the enteric pathogen Yersinia pseudotuberculosis

(Submitter supplied) This SuperSeries is composed of the SubSeries listed below.
Organism:
Yersinia pseudotuberculosis
Type:
Expression profiling by array
Platform:
GPL15095
9 Samples
Download data: TXT
Series
Accession:
GSE54547
ID:
200054547
7.

The pyruvate-tricarboxylic acid cycle node: a focal point of virulence control in the enteric pathogen Yersinia pseudotuberculosis [rovA mutant]

(Submitter supplied) Whole transcriptome assessment of the Yersinia pseudotuberculosis strain YPIII. The Y. pseudotuberculosis rovA regulon was determined in Yersinia minimal minimum developed for the study. RovA is a key regulator for Yersinia virulence.
Organism:
Yersinia pseudotuberculosis
Type:
Expression profiling by array
Platform:
GPL15095
3 Samples
Download data: TXT
Series
Accession:
GSE54546
ID:
200054546
8.

The pyruvate-tricarboxylic acid cycle node: a focal point of virulence control in the enteric pathogen Yersinia pseudotuberculosis [csrA mutant]

(Submitter supplied) Whole transcriptome assessment of the Yersinia pseudotuberculosis strain YPIII. The Y. pseudotuberculosis csrA regulon was determined in Yersinia minimal minimum developed for the study. CsrA is a key regulator coordinating virulence and metabolism.
Organism:
Yersinia pseudotuberculosis
Type:
Expression profiling by array
Platform:
GPL15095
3 Samples
Download data: TXT
Series
Accession:
GSE54545
ID:
200054545
9.

The pyruvate-tricarboxylic acid cycle node: a focal point of virulence control in the enteric pathogen Yersinia pseudotuberculosis [crp mutant]

(Submitter supplied) Whole transcriptome assessment of the Yersinia pseudotuberculosis strain YPIII. The Y. pseudotuberculosis crp regulon was determined in Yersinia minimal minimum developed for the study. Crp is a key regulator coordinating virulence and metabolism.
Organism:
Yersinia pseudotuberculosis
Type:
Expression profiling by array
Platform:
GPL15095
3 Samples
Download data: TXT
Series
Accession:
GSE54544
ID:
200054544
10.

Adaptation of Bacillus subtilis tat and S313 mutant cells to growth in Lysogeny Broth (LB) lacking NaCl

(Submitter supplied) In B. subtilis, the Tat secretion system is essential for effective growth in media lacking iron or NaCl, which is related to the Tat-dependent export of the heme peroxidase EfeB. In Lysogeny Broth (LB) without NaCl, tat mutant bacteria undergo cell lysis in the early exponential growth phase. Part of the population of mutant bacteria then adapts to the salt-deprived condition and resumes growth. The absence of sRNA S313, which has a predicted role in modulating the expression of the efeUOB operon, also leads to a lysis-recovery phenotype. more...
Organism:
Bacillus subtilis subsp. subtilis str. 168
Type:
Expression profiling by array
Platform:
GPL21669
15 Samples
Download data: TXT
Series
Accession:
GSE149595
ID:
200149595
11.

Crp induces switching of the CsrB and CsrC RNAs in Yersinia pseudotuberculosis and links nutritional status to virulence

(Submitter supplied) Colonization of the intestinal tract and dissemination into deeper tissues by the enteric patho­gen Yersinia pseudotuberculosis demands expression of a special set of virulence factors important for the initiation and the persistence of the infection. In this study we demonstrate that many virulence-associated functions are coregulated with the carbohydrate metabolism. This link is mediated by the carbon storage regulator (Csr) system, including the regulatory RNAs CsrB and CsrC, and the cAMP receptor protein (Crp), which both control virulence gene expression in response to the nutrient composition of the medium. more...
Organism:
Yersinia pseudotuberculosis; Yersinia pseudotuberculosis YPIII
Type:
Expression profiling by array
Platform:
GPL15095
4 Samples
Download data: GPR
Series
Accession:
GSE42206
ID:
200042206
12.

Hemochromatosis drives acute lethal intestinal responses to hyper-yersiniabactin-producing Yersinia pseudotuberculosis

(Submitter supplied) Hemachromatosis (iron-overload) increases host susceptibility to siderophilic bacterial infections that cause serious complications, but the underlying mechanisms remain elusive. The present study demonstrates that oral infection with hyper-yersiniabactin (Ybt) producing Yersinia pseudotuberculosis Δfur mutant (termed Δfur) results in severe systemic infection and acute mortality to hemochromatotic mice due to rapid disruption of the intestinal barrier. more...
Organism:
Mus musculus
Type:
Expression profiling by high throughput sequencing
Platform:
GPL19057
9 Samples
Download data: TXT
Series
Accession:
GSE180888
ID:
200180888
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