U.S. flag

An official website of the United States government

Format
Sort by

Send to:

Choose Destination

Links from GEO DataSets

Items: 5

1.

Transcriptomic responses of the endangered freshwater mussel Margaritifera margaritifera to trace metal contamination in the Dronne River, France

(Submitter supplied) The freshwater pearl mussel Margaritifera margaritifera is one of the most threatened freshwater bivalves worldwide. In this study, we aimed (i) to study the processes by which water quality might affect freshwater mussels in situ and (ii) to provide insights into the ecotoxicological significance of water pollution to natural populations in order to provide necessary information to enhance conservation strategies. more...
Organism:
Pinctada margaritifera; Margaritifera margaritifera
Type:
Expression profiling by high throughput sequencing
Platform:
GPL23031
32 Samples
Download data: CSV, FA
Series
Accession:
GSE94542
ID:
200094542

PubMed Similar studies SRA Run Selector

2.

Gene expression profiling of native mussels from Venice lagoon area

(Submitter supplied) We examined gene expression profiling of native mussels that were sampled in early summer 2003 from sites of the Venice lagoon area known to be differently affected by chemical pollution: Sites 1 and 2 close to the industrial district of Marghera and Site 3 close to the Lido lagoon outlet. Site 4, a current mussel farm located offshore, has been chosen as source of reference targets for microarray hybridizations. more...
Organism:
Mytilus galloprovincialis
Type:
Expression profiling by array
Platform:
GPL1799
6 Samples
Download data
Series
Accession:
GSE2184
ID:
200002184

PubMed Similar studies Analyze with GEO2R

3.

Gene expression profiling of mussels treated with two chemical mixtures

(Submitter supplied) We examined gene expression profiling of mussels treated with two chemical mixtures composed by heavy metals or organic compounds, both including genotoxic agents (cadmium, benzo[a]pyrene, 1-nitro/amino-pyrene) and other contaminants (cupper, mercury, fluoranthene, TCDD). For digestive gland one RNA sample from control mussels and one from each treatment group (7 mussels) were competitively hybridized on the MytArray 1.0. more...
Organism:
Mytilus galloprovincialis
Type:
Expression profiling by array
Platform:
GPL1799
4 Samples
Download data
Series
Accession:
GSE2183
ID:
200002183

PubMed Similar studies Analyze with GEO2R

4.

Tissue specificity of gene expression profiling from mussels in normal conditions.

(Submitter supplied) We examined tissue specificity of gene expression in control mussels. Total RNA was isolated from gills (G), digestive gland (DG), tissues involved in contraction/motility (FML: foot/adductor muscles/ligaments) and reproduction (GM: gonads and mantle) producing four tissue-specific samples. Total RNA was reverse-transcribed and labeled using a Cy3-dCTP and Cy5-dCTP direct incorporation. Each sample was hybridized in competition with the total pool (equal RNA amounts from G, DG, GM and FML) and the relative abundance of each gene was measured by directly comparing fluorescent signals for each probe. more...
Organism:
Mytilus galloprovincialis
Type:
Expression profiling by array
Platform:
GPL1799
8 Samples
Download data
Series
Accession:
GSE2176
ID:
200002176

PubMed Similar studies Analyze with GEO2R

5.

Mussel MytArray 1.0

(Submitter supplied) MytArray 1.0 is a cDNA platform, that consists of 1,712 different clones obtained from systematic sequencing of multiple Mytilus galloprovincialis tissues cDNA library and 46 unrelated controls (ESTs from Coffea and bacterial species) printed in duplicate and twice per slide. This library was produced using a strategy that allows the selection of a short 3’-end region of mRNAs and the tagging of each transcript with an unique probe. more...
Organism:
Mytilus galloprovincialis
6 Series
68 Samples
Download data
Platform
Accession:
GPL1799
ID:
100001799

PubMed Similar studies

Format
Sort by

Send to:

Choose Destination

Supplemental Content

Filters: Manage Filters

db=gds|term=|query=9|qty=4|blobid=MCID_6730cf9a09f6985887631426|ismultiple=true|min_list=5|max_list=20|def_tree=20|def_list=|def_view=|url=/Taxonomy/backend/subset.cgi?|trace_url=/stat?
   Taxonomic Groups  [List]
Tree placeholder
    Top Organisms  [Tree]

Find related data

Important Links

Recent activity

Clear Turn Off Turn On

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

See more...
You are here: NCBI > Genes & Expression > Gene Expression Omnibus (GEO) Datasets
Support Center