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Links from GEO DataSets

Items: 5

1.

RNA-seq analysis of blood transcriptomes from beluga whales in Bristol Bay, Alaska, USA

(Submitter supplied) Whole blood was collected as part of annual health assessments of beluga whales from the healthy Bristol Bay, Alaska stock during 2012-2014. Gene expression from 24 animals (8 from each year) was analyzed to establish baseline information on the content and variation of the beluga whale blood transcriptome.
Organism:
Delphinapterus leucas
Type:
Expression profiling by high throughput sequencing
Platform:
GPL23455
24 Samples
Download data: FASTA, XLSX
Series
Accession:
GSE98735
ID:
200098735
2.

RNA-seq analysis of blood transcriptomes from managed bottlenose dolphins in Waikoloa, Hawaii, USA

(Submitter supplied) Whole blood was collected as part of monthly veterinary checkups of bottlenose dolphins housed at Dolphing Quest in Waikoloa, Hawaii, USA. Gene expression from 5 samples was analyzed for comparison to the blood transcriptome of the beluga whale.
Organism:
Tursiops truncatus
Type:
Expression profiling by high throughput sequencing
Platform:
GPL21538
5 Samples
Download data: FASTA, XLSX
Series
Accession:
GSE98627
ID:
200098627
3.

RNA-seq analysis of seasonal and individual variation in blood transcriptomes of healthy captive bottlenose dolphins

(Submitter supplied) Four captive bottlenose dolpins housed in Kona, Hawaii, were serially sampled at approximately monthly intervals over the course of one year, in order to establish baseline information on the content and variation of the dolphin blood transcriptome.
Organism:
Tursiops truncatus
Type:
Expression profiling by high throughput sequencing
Platform:
GPL21538
31 Samples
Download data: FASTA, PDF, XLS, XLSX
Series
Accession:
GSE78770
ID:
200078770
4.

Seasonal Variation in the Skin Transcriptome of Bottlenose Dolphins (Tursiops truncatus)

(Submitter supplied) As apex predators, cetaceans are recognized as sentinels for the health of marine ecosystems. The ability to identify the impacts of anthropogenic contamination on the health of a species requires long term monitoring to establish baseline health parameters. This makes health measurements that can be sampled from free ranging animals highly desirable. In the current study, we investigate the utility of skin gene expression profiling to monitor the physiological, health, and contaminant exposure status in bottlenose dolphins. more...
Organism:
Tursiops truncatus
Type:
Expression profiling by array
Platform:
GPL18797
94 Samples
Download data: TXT
Series
Accession:
GSE58471
ID:
200058471
5.

Genome Methylation in Wild Beluga Whales

(Submitter supplied) An Infinium microarray platform (GPL28271, HorvathMammalMethylChip40) was used to generate DNA methylation data from skin samples of beluga whales, Maui's dolphin, and humpback whale. Tissue: Skin
Organism:
Homo sapiens; Physeter catodon; Delphinapterus leucas; Mus musculus; Rattus norvegicus; Cephalorhynchus hectori maui; Balaenoptera musculus; Megaptera novaeangliae
Type:
Methylation profiling by genome tiling array
Platform:
GPL28271
143 Samples
Download data: IDAT
Series
Accession:
GSE164465
ID:
200164465
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Supplemental Content

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