Similar studies for GEO DataSets (Select 668) - GEO DataSets

Select item 6681.

Indole acetic acid treatment time course (ATH1)

Analysis of 10-12 day Columbia-O seedlings treated with 0.1 uM indole acetic acid (IAA) auxin for 1 and 3 hours. Treated seedlings analyzed in reference to untreated control. Part of a study comparing AG and ATH1 arrays.

Organism:: Arabidopsis thaliana

Type:: Expression profiling by array, count, 2 dose, 3 time sets

Platform:: GPL198
Series:: GSE1111
6 Samples

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DataSet

Accession:: GDS668

ID:: 668

Select item 2000011112.

Comparison of AG and ATH1 using IAA

(Submitter supplied) Arabidopsis seedlings (Col-0) were grown in suspension in half-strength MS medium with agitation at ~100 rpm at ~22 C under ~50 microeinsteins m-2s-1 cool white fluorescent continuous illumination as described by (Xiao et al., Plant Physiol. 2002 Dec;130(4):2118-28). Seedlings were treated at 10-12 days by addition of freshly made IAA (0.1 or 1.0uM) to each flask, and harvested after a 1 or 3 hour incubation. more...

Organism:: Arabidopsis thaliana

Type:: Expression profiling by array

Datasets:: GDS668 GDS671
Platforms:: GPL198 GPL71
12 Samples

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Series

Accession:: GSE1111

ID:: 200001111

Select item 2000011103.

Arabidopsis thaliana gene expression in response to IAA challange

(Submitter supplied) Arabidopsis seedlings (Col-0) were grown in suspension in half-strength MS medium with agitation at ~100 rpm at ~22 C under ~50 microeinsteins m-2s-1 cool white fluorescent continuous illumination as described by (Xiao et al., Plant Physiol. 2002 Dec;130(4):2118-28). Seedlings were treated at 10-12 days by addition of freshly made IAA (0.1 or 1.0uM) to each flask, and harvested after a 1 or 3 hour incubation. more...

Organism:: Arabidopsis thaliana

Type:: Expression profiling by array

Dataset:: GDS672
Platform:: GPL198
22 Samples

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Series

Accession:: GSE1110

ID:: 200001110

Select item 6724.

Indole acetic acid treatment: dose response and time course

Analysis of 10-12 day Columbia-O seedlings treated with either 0.1 uM or 1.0 uM indole acetic acid (IAA) auxin for 1 and 3 hours. Treated seedlings analyzed in reference to untreated control. Part of a study assessing the performance of the ATH1 array.

Organism:: Arabidopsis thaliana

Type:: Expression profiling by array, count, 3 dose, 2 protocol, 3 time sets

Platform:: GPL198
Series:: GSE1110
22 Samples

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DataSet

Accession:: GDS672

ID:: 672

Select item 6715.

Indole acetic acid treatment time course (AG)

Analysis of 10-12 day Columbia-O seedlings treated with 0.1 uM indole acetic acid (IAA) auxin for 1 and 3 hours. Treated seedlings analyzed in reference to untreated control. Part of a study comparing AG and ATH1 arrays.

Organism:: Arabidopsis thaliana

Type:: Expression profiling by array, count, 2 dose, 3 time sets

Platform:: GPL71
Series:: GSE1111
6 Samples

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DataSet

Accession:: GDS671

ID:: 671

Select item 2000069016.

Expression data for stress treatment in rice seedlings

(Submitter supplied) Drought, salinity and sub-optimal temperatures are stresses that cause adverse effects on the growth of plants and the productivity of crops. In this study, we have analyzed the expression profiles of rice genes under control and abiotic stress conditions using microarray technology to identify the genes differentially expressed during various abiotic stresses. Keywords: Stress treatment

Organism:: Oryza sativa

Type:: Expression profiling by array

Platform:: GPL2025
12 Samples

Download data: CEL

Series

Accession:: GSE6901

ID:: 200006901

PubMed Full text in PMC Similar studies Analyze with GEO2R

Select item 2000068937.

Expression data for reproductive development in rice

(Submitter supplied) Plants initially undergo a period of vegetative development, in which it produces leaves from shoot apical meristem (SAM) and roots from the root apical meristem. Later in development, the SAM undergoes a change in fate and enters reproductive development called as floral transition, producing flowers and seeds. Our understanding of the molecular and genetic mechanisms that underlie reproductive development in plants has increased tremendously in the past decade, essentially through the work on Arabidopsis. more...

Organism:: Oryza sativa

Type:: Expression profiling by array

Platform:: GPL2025
45 Samples

Download data: CEL

Series

Accession:: GSE6893

ID:: 200006893

PubMed Full text in PMC Similar studies Analyze with GEO2R

Select item 2000051678.

Rice seedling hormone treatment

(Submitter supplied) Indica rice seedlings of IR64 variety were grown hydroponically for 7-days in a culture room with a daily photoperiodic cycle of 14h light and 10h dark. Seedlings were incubated in 0.1% dimethyl sulfoxide (control) or 50 micromolar solutions of indole-3-acetic acid (IAA treatment) and benzyl aminopurine (BAP treatment) for 1h and 3h. Equal amounts of 1h and 3h samoles were pooled for each treatment before RNA isolation. more...

Organism:: Oryza sativa

Type:: Expression profiling by array

Platform:: GPL2025
6 Samples

Download data: CAB, CEL, EXP

Series

Accession:: GSE5167

ID:: 200005167

Select item 2000017669.

Time course of Arabidopsis seedlings treated with 6-Benzyl adenine

(Submitter supplied) Time course of Arabidopsis seedlings treated with 6-Benzyl adenine dissolved in diluted KOH for 15 min or 2 hours Keywords: other

Organism:: Arabidopsis thaliana

Type:: Expression profiling by array

Platform:: GPL198
13 Samples

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Series

Accession:: GSE1766

ID:: 200001766

Select item 20000066410.

indole-3-acetic acid (IAA) time course

(Submitter supplied) Approximately 500 surface sterilized seeds of Arabidopsis seeds (ecotype: Col-0) were sterilely sown on filter disks overlaying solid ½ MS media 1% sucrose, stratified at 4C for 48 h and grown in darkness at 25C for 4 d. Seedlings were gently submerged by application to the plates of the different auxin solutions (made in ethanol carrier; 0.1% final concentration) and at the indicated times (20 min, 40 min, 60 min), the seedlings were lifted from the plate en mass and flash frozen in liquid nitrogen. more...

Organism:: Arabidopsis thaliana

Type:: Expression profiling by array

Dataset:: GDS481
Platform:: GPL483
3 Samples

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Series

Accession:: GSE664

ID:: 200000664

Select item 48111.

Indole-3-acetic acid time course

Temporal analysis of effect of auxin indole-3-acetic acid (IAA) on Columbia-0 seedlings. 20, 40 and 60 minute time points examined.

Organism:: Arabidopsis thaliana

Type:: Expression profiling by array, log ratio, 3 time sets

Platform:: GPL483
Series:: GSE664
3 Samples

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DataSet

Accession:: GDS481

ID:: 481

Select item 20000398412.

Difference in expression between SA- and mock-treated leaves 2 hours after application

(Submitter supplied) Arabidopsis plants, ecotype Columbia, were sprayed with surfactant alone (0.01% Silwet) or surfactant and 1mM salicylic acid until all leaves were wet, 3 to 4 weeks after germination (before flowering). Leaves were harvested and frozen in liquid nitrogen. Three biological replicates were obtained over a period of 6 months. For each replicate, RNA was extracted using standard phenol/chloroform protocol and biotin-labeled cRNA was synthesized. more...

Organism:: Arabidopsis thaliana

Type:: Expression profiling by array

Dataset:: GDS2207
Platform:: GPL198
6 Samples

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Series

Accession:: GSE3984

ID:: 200003984

Select item 220713.

Salicylic acid effect on leaves

Analysis of leaves 2 hours after treatment with salicylic acid (SA) which induces systemic acquired resistance (SAR). SA-induced genes examined for the presence of neighboring putative binding sites for the transcription factor TGA2. Results provide insight into role of TGA factors in triggering SAR

Organism:: Arabidopsis thaliana

Type:: Expression profiling by array, transformed count, 2 agent sets

Platform:: GPL198
Series:: GSE3984
6 Samples

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DataSet

Accession:: GDS2207

ID:: 2207

Select item 20009476414.

Differentially expressed genes in developing seeds of Arabidopsis thaliana accessions Col-0 and C24 - Impact of polymorphic probes on the detection of differentially expressed genes

(Submitter supplied) This SuperSeries is composed of the SubSeries listed below.

Organism:: Arabidopsis thaliana

Type:: Expression profiling by array

Platform:: GPL198
36 Samples

Download data: CEL

Series

Accession:: GSE94764

ID:: 200094764

Select item 20009476315.

Differentially expressed genes in developing seeds of Arabidopsis thaliana accessions Col-0 and C24 - Impact of the exclusion of polymorphic probes via a sequence-based approach

(Submitter supplied) In order to identify differentially expressed genes in developing seeds of Arabidopsis thaliana three different stages of seed development were analysed (9-10, 10-11 and 12-13 days after flower opening) for two Arabidopsis thaliana accessions, Col-0 and C24. For each stage and accession three biological replicates were analysed.

Organism:: Arabidopsis thaliana

Type:: Expression profiling by array

Platform:: GPL198
18 Samples

Download data: CEL

Series

Accession:: GSE94763

ID:: 200094763

Select item 20009476216.

Differentially expressed genes in developing seeds of Arabidopsis thaliana accessions Col-0 and C24

(Submitter supplied) In order to identify differentially expressed genes in developing seeds of Arabidopsis thaliana three different stages of seed development were analysed (9-10, 10-11 and 12-13 days after flower opening) for two Arabidopsis thaliana accessions, Col-0 and C24. For each stage and accession three biological replicates were analysed.

Organism:: Arabidopsis thaliana

Type:: Expression profiling by array

Platform:: GPL198
18 Samples

Download data: CEL

Series

Accession:: GSE94762

ID:: 200094762

Select item 20000086317.

Auxin effects on seedlings

(Submitter supplied) Five-day old light-grown Arabidopsis seedlings were immersed 10 µM indole-3-acetic acid (auxin) or water Keywords: repeat sample

Organism:: Arabidopsis thaliana

Type:: Expression profiling by array

Dataset:: GDS744
Platform:: GPL198
4 Samples

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Series

Accession:: GSE863

ID:: 200000863

PubMed Full text in PMC Similar studies Analyze with GEO2R

Select item 20000086218.

BR effects on WT and yucca seedlings

(Submitter supplied) Ten-day old light-grown Arabidopsis seedlings were immersed in 1 µM brassinolide in one-half-strength Murashige Minimal Organics Medium (Invitrogen, Carlsbad, CA) or media alone for 2.5 hours Keywords: repeat sample

Organism:: Arabidopsis thaliana

Type:: Expression profiling by array

Dataset:: GDS743
Platform:: GPL198
8 Samples

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Series

Accession:: GSE862

ID:: 200000862

PubMed Full text in PMC Similar studies Analyze with GEO2R

Select item 74419.

Auxin effects on seedlings

Analysis of effects of indole-3-acetic acid (IAA, auxin) treatment on 5 day old light-grown Columbia-0 seedlings. Auxins promote cell expansion.

Organism:: Arabidopsis thaliana

Type:: Expression profiling by array, count, 2 agent sets

Platform:: GPL198
Series:: GSE863
4 Samples

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DataSet

Accession:: GDS744

ID:: 744

PubMed Full text in PMC Similar studies GEO Profiles Analyze DataSet

Select item 74320.

Brassinosteroid effects on wild type and yucca mutant seedlings

Analysis of brassinolide treatment on 10 day old light-grown Columbia-O wild type and yucca mutant seedlings. Yucca mutants overproduce auxin. Brassinosteroids (BRs) promote cell expansion.

Organism:: Arabidopsis thaliana

Type:: Expression profiling by array, count, 2 agent, 2 strain sets

Platform:: GPL198
Series:: GSE862
8 Samples

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DataSet

Accession:: GDS743

ID:: 743

PubMed Full text in PMC Similar studies GEO Profiles Analyze DataSet

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