GEO Browser - GEO

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25 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter			Canis lupus familiaris		IDAT
GSE90441	Whole genome sequence, SNP chips and pedigree structure	SNP genotyping by SNP array Genome variation profiling by SNP array	Canis lupus Canis lupus familiaris	795	IDAT TXT	Dayna Dreger	Nov 24, 2016
GSE219090	The dogs of Chernobyl: demographic insights into populations inhabiting the nuclear exclusion zone	Genome variation profiling by SNP array	Canis lupus familiaris	299	BED BIM FAM IDAT TXT	Alexander Christian Harris	Dec 14, 2022
GSE121027	Studies of modern Italian dog populations reveal multiple patterns for domestic breed evolution	Genome variation profiling by SNP array SNP genotyping by SNP array	Canis lupus familiaris	273	IDAT TXT	Alexander Christian Harris	Oct 10, 2018
GSE83154	Studies of canine breed development on the island of Sardinia recapitulate genomic features of human population isolates [MEDI]	Genome variation profiling by SNP array SNP genotyping by SNP array	Canis lupus familiaris	82	IDAT TXT	Dayna Dreger	Jun 10, 2016
GSE83151	Studies of canine breed development on the island of Sardinia recapitulate genomic features of human population isolates [COO]	Genome variation profiling by SNP array SNP genotyping by SNP array	Canis lupus familiaris	51	IDAT TXT	Dayna Dreger	Jun 10, 2016
GSE83225	Studies of canine breed development on the island of Sardinia recapitulate genomic features of human population isolates [CANE]	Genome variation profiling by SNP array SNP genotyping by SNP array	Canis lupus familiaris	4	IDAT TXT	Dayna Dreger	Jun 10, 2016
GSE83160	Studies of canine breed development on the island of Sardinia recapitulate genomic features of human population isolates	Genome variation profiling by SNP array SNP genotyping by SNP array	Canis lupus familiaris	137	IDAT	Dayna Dreger	Jun 10, 2016
GSE123368	SNP genotyping of various breeds	SNP genotyping by SNP array Genome variation profiling by SNP array	Canis lupus familiaris	95	IDAT TXT	Heidi G Parker	Dec 06, 2018
GSE193384	SNP genotyping of dogs Patagonian Sheepdogs	SNP genotyping by SNP array Genome variation profiling by SNP array	Canis lupus familiaris	146	IDAT TXT	Heidi G Parker	Jan 15, 2022
GSE143824	SNP genotyping of Highland Wild dogs, New Guinea Singing Dogs, and a dingo.	SNP genotyping by SNP array	Canis lupus Canis lupus familiaris	14	IDAT TXT	Heidi G Parker	Mar 31, 2020
GSE163783	Regulatory variants associated with canine hematopoietic cancers	SNP genotyping by SNP array	Canis lupus familiaris	311	IDAT TXT	Alexander Christian Harris	Apr 13, 2021
GSE87642	Progressive retinal atrophy in the Hungarian Puli	SNP genotyping by SNP array	Canis lupus familiaris	14	IDAT TXT	Tracy Chew	Oct 31, 2016
GSE223748	Mammalian Methylation Consortium	Methylation profiling by array	Acinonyx jubatus Acomys cahirinus Addax nasomaculatus Aepyceros melampus Alexandromys fortis Alexandromys maximowiczii Alexandromys mongolicus Alexandromys oeconomus Alticola barakshin Alticola semicanus Amblysomus hottentotus Antidorcas marsupialis Antrozous pallidus Aonyx cinereus Aplodontia rufa Apodemus agrarius Apodemus peninsulae Apodemus sylvaticus Apodemus uralensis Artibeus jamaicensis Arvicanthis niloticus Asellia tridens Atelerix albiventris Balaena mysticetus Balaenoptera borealis Balaenoptera musculus Bathyergus janetta Bathyergus suillus Blarina brevicauda Bos taurus Bradypus variegatus Cabassous unicinctus Caenolestes fuliginosus Callithrix geoffroyi Callithrix jacchus Callospermophilus lateralis Callospermophilus saturatus Canis latrans Canis lupus familiaris Capra hircus Capreolus capreolus Carollia perspicillata Castor canadensis Cavia aperea Cavia porcellus Cavia tschudii Cephalorhynchus commersonii Cephalorhynchus hectori hectori Cephalorhynchus hectori maui Ceratotherium simum simum Cervus canadensis Cervus elaphus Chaetophractus villosus Cheirogaleus medius Chinchilla lanigera Chlorocebus sabaeus Choloepus didactylus Choloepus hoffmanni Chrysocyon brachyurus Clethrionomys gapperi Condylura cristata Connochaetes taurinus albojubatus Cricetomys gambianus Cricetulus barabensis Cricetulus griseus Cricetulus longicaudatus Crocidura cyanea Crocuta crocuta Cryptomys hottentotus Ctenomys lewisi Ctenomys opimus Ctenomys steinbachi Cuniculus paca Cyclopes didactylus Cynopterus brachyotis Dasypus novemcinctus Daubentonia madagascariensis Delphinapterus leucas Delphinus delphis Dendrohyrax arboreus Desmodus rotundus Diceros bicornis Didelphis marsupialis Didelphis virginiana Dipus sagitta Dromiciops gliroides Echinops telfairi Eidolon helvum Elephantulus edwardii Elephantulus myurus Elephas maximus Ellobius talpinus Enhydra lutris Eozapus setchuanus Eptesicus fuscus Equus asinus somalicus Equus caballus Equus grevyi Equus quagga Erethizon dorsatum Erinaceus europaeus Eudorcas thomsonii Eulemur albifrons Eulemur coronatus Eulemur flavifrons Eulemur fulvus Eulemur fulvus collaris Eulemur macaco Eulemur mongoz Eulemur rubriventer Eulemur rufus Eulemur sanfordi Eumetopias jubatus Felis catus Fukomys damarensis Galago moholi Galea musteloides Galea musteloides leucoblephara Galeopterus variegatus Gazella leptoceros Georychus capensis Gerbillus cheesmani Gerbillus nanus Giraffa camelopardalis Glaucomys sabrinus Globicephala macrorhynchus Gorilla gorilla Hapalemur griseus Hemicentetes semispinosus Hemiechinus auritus Heterocephalus glaber Hipposideros ruber Hippotragus equinus Hippotragus niger Homo sapiens Hydrochoerus hydrochaeris Hylomys suillus Hystrix cristata Ictidomys tridecemlineatus Jaculus jaculus Kobus megaceros Lagenorhynchus albirostris Lagenorhynchus obliquidens Lasiopodomys brandtii Lasiopodomys gregalis Lasiopodomys mandarinus Lemur catta Leptonycteris yerbabuenae Lepus americanus Lepus californicus Litocranius walleri Loris tardigradus Loxodonta africana Lycaon pictus Lynx rufus Macaca mulatta Macropus fuliginosus Macropus giganteus Macroscelides proboscideus Marmota flaviventris Marmota monax Martes americana Megaptera novaeangliae Meriones libycus Meriones rex Meriones unguiculatus Mesocricetus auratus Mesoplodon bidens Micaelamys namaquensis Microcebus murinus Microgale cowani Microgale drouhardi Microgale thomasi Microtus guentheri Microtus ochrogaster Microtus pennsylvanicus Microtus richardsoni Mirza zaza Molossus molossus Monodelphis domestica Mops pumilus Muntiacus vaginalis Mus minutoides Mus musculus Mustela altaica Mustela frenata Mustela putorius furo Myocastor coypus Myodes rufocanus Myotis brandtii Myotis evotis Myotis lucifugus Myotis myotis Myotis nattereri Myotis thysanodes Myotis vivesi Myotis yumanensis Nanger dama Nanger granti Nanger soemmerringii Nannospalax ehrenbergi Nannospalax galili Napaeozapus insignis Neogale vison Neomys fodiens Neophoca cinerea Neotoma cinerea Nesogale talazaci Neurotrichus gibbsii Notamacropus agilis Notamacropus eugenii Notamacropus rufogriseus Nothocricetulus migratorius Nyctalus noctula Nycticebus coucang Nycticeius humeralis Ochotona alpina Ochotona dauurica Ochotona hyperborea Ochotona pallasi Ochotona princeps Ochotona rufescens Odobenus rosmarus divergens Odocoileus virginianus Okapia johnstoni Ondatra zibethicus Orcinus orca Oreamnos americanus Orientallactaga sibirica Ornithorhynchus anatinus Orycteropus afer Oryctolagus cuniculus Osphranter robustus Osphranter rufus Otolemur crassicaudatus Ovis aries Pan troglodytes Panthera leo Panthera tigris Papio hamadryas Paraechinus aethiopicus Paraechinus hypomelas Parascalops breweri Perodicticus potto Peromyscus californicus Peromyscus eremicus Peromyscus leucopus Peromyscus maniculatus Peromyscus polionotus Phascolarctos cinereus Phoca groenlandica Phoca vitulina Phocoena phocoena Phodopus campbelli Phodopus roborovskii Phyllostomus discolor Phyllostomus hastatus Physeter catodon Pipistrellus pipistrellus Plecotus auritus Pongo pygmaeus Procavia capensis Propithecus coquereli Propithecus diadema Propithecus tattersalli Pteropus giganteus Pteropus hypomelanus Pteropus poliocephalus Pteropus pumilus Pteropus rodricensis Pteropus vampyrus Puma concolor Rattus norvegicus Rattus rattus Rhabdomys pumilio Rhinoceros unicornis Rhinolophus alcyone Rhinolophus ferrumequinum Rhinopoma hardwickii Rhombomys opimus Rhynchonycteris naso Rousettus aegyptiacus Saccopteryx bilineata Sarcophilus harrisii Scalopus aquaticus Scapanus orarius Sciurus carolinensis Sciurus niger Setifer setosus Smutsia temminckii Sorex caecutiens Sorex cinereus Sorex hoyi Sorex isodon Sorex minutissimus Sorex palustris Sorex roboratus Sorex trowbridgii Sorex tundrensis Sorex vagrans Steno bredanensis Suncus murinus Suncus varilla Suricata suricatta Sus scrofa Sus scrofa domesticus Sylvilagus audubonii Sylvilagus bachmani Sylvilagus brasiliensis Sylvilagus floridanus Sylvilagus nuttallii Tachyglossus aculeatus Tadarida brasiliensis Talpa occidentalis Tamandua mexicana Tamandua tetradactyla Tamias amoenus Tamias striatus Tamias townsendii Tamiasciurus douglasii Tamiasciurus hudsonicus Tenrec ecaudatus Tolypeutes matacus Trachypithecus francoisi Tragelaphus angasii Tragelaphus eurycerus Tragelaphus imberbis Tragelaphus oryx Tragelaphus spekii Tragelaphus strepsiceros Trichechus manatus Tupaia belangeri Tupaia gracilis Tupaia longipes Tupaia tana Tursiops aduncus Tursiops truncatus Urocitellus columbianus Ursus americanus Varecia rubra Varecia variegata Vicugna pacos Vombatus ursinus Vulpes vulpes Xanthonycticebus pygmaeus Zalophus californianus Zapus princeps	15043	CSV DOCX IDAT	Steve Horvath	Aug 05, 2023
GSE141128	Identification of genetic susceptibility factors associated with canine gastric dilatation-volvulus	SNP genotyping by SNP array Genome variation profiling by SNP array	Canis lupus familiaris	215	IDAT TXT	Ignazio Stefano Piras	Dec 01, 2020
GSE73400	Genotyping of 22 Great Danes with Ichthyosis	Genome binding/occupancy profiling by SNP array	Canis lupus familiaris	22	IDAT TXT	Julia Metzger	Nov 03, 2015
GSE276576	Genomic reconstruction of Galápagos dog history reveals strategies for management of an invasive species	SNP genotyping by SNP array Genome variation profiling by SNP array	Canis lupus familiaris	187	IDAT TXT	Alexander Christian Harris	Oct 01, 2024
GSE96736	Genomic analyses reveal the influence of geographic origin, migration and hybridization on modern dog breed development	Genome variation profiling by SNP array	Canis lupus familiaris	158	IDAT TXT	Heidi G Parker	Mar 17, 2017
GSE147501	Genetic analysis of the modern Australian labradoodle dog breed reveals strong selection for poodle traits	Genome variation profiling by SNP array SNP genotyping by SNP array	Canis lupus familiaris	47	IDAT TXT	Alexander Christian Harris	Jul 17, 2020
GSE66677	Effective population size, extended linkage disequilibrium and signatures of selection in the rare dog breed Lundehund	Genome variation profiling by SNP array SNP genotyping by SNP array	Canis lupus familiaris	28	CSV IDAT	Ottmar Distl	Mar 09, 2015
GSE213053	Domestic dog lineages reveal genetic drivers of behavioral diversification	SNP genotyping by SNP array Genome variation profiling by SNP array	Canis lupus Canis lupus dingo Canis lupus familiaris	956	IDAT TXT	Alexander Christian Harris	Dec 07, 2022