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63 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter			Taeniopygia guttata
GSE33360	Discovery of novel microRNAs in rat kidney using microarray analyses	Non-coding RNA profiling by array	Ateles geoffroyi Bos taurus Canis lupus familiaris Danio rerio Equus caballus Gallus gallus Homo sapiens Macaca mulatta Macaca nemestrina Mus musculus Ornithorhynchus anatinus Oryzias latipes Ovis aries Pan paniscus Pan troglodytes Petromyzon marinus Pongo pygmaeus Rattus norvegicus Rhinopithecus bieti Saguinus labiatus Sus scrofa Symphalangus syndactylus Taeniopygia guttata Takifugu rubripes Tetraodon nigroviridis Xenopus laevis Xenopus tropicalis	6	TXT	Fanxue Meng	Nov 02, 2011
GSE61060	A genome-wide search for epigenetically regulated genes in zebra finch using MethylCap-seq and RNA-seq	Methylation profiling by high throughput sequencing Expression profiling by high throughput sequencing	Taeniopygia guttata	10	BEDGRAPH TXT SRA Run Selector	Sandra Steyaert	Dec 10, 2015
GSE100396	Genome-wide mRNA expression and methylation patterns of neural genes in response to prenatal hormones	Methylation profiling by high throughput sequencing Expression profiling by high throughput sequencing	Taeniopygia guttata	48	DIFF TSV SRA Run Selector	Kristen Jean Navara	Mar 01, 2019
GSE147973	DNA methylation regulates transcription factor specific neurodevelopmental but not sexually dimorphic gene expression dynamics in zebra finch telencephalon [RRBS]	Methylation profiling by high throughput sequencing	Taeniopygia guttata	48	COV SRA Run Selector	Jeroen Galle	Apr 07, 2021
GSE147974	DNA methylation regulates transcription factor specific neurodevelopmental but not sexually dimorphic gene expression dynamics in zebra finch telencephalon	Methylation profiling by high throughput sequencing Expression profiling by high throughput sequencing	Taeniopygia guttata	72	COV	Jeroen Galle	Apr 07, 2021
GSE58334	Epigenetics and the Evolution of Darwin’s Finches	Methylation profiling by genome tiling array Genome variation profiling by genome tiling array	Camarhynchus parvulus Geospiza fortis Geospiza fuliginosa Geospiza scandens Platyspiza crassirostris Taeniopygia guttata	24	CSV GFF PAIR TXT	Michael K Skinner	Jun 10, 2014
GSE63936	Core and region enriched networks of behaviorally regulated genes: the singing epigenome	Genome binding/occupancy profiling by high throughput sequencing	Taeniopygia guttata	8	BW TXT SRA Run Selector	Andreas R Pfenning	Dec 08, 2014
GSE91399	Epigenetic signature of extended critical period learning	Genome binding/occupancy profiling by high throughput sequencing	Taeniopygia guttata	23	BED BW SRA Run Selector	Sarah E London	May 29, 2018
GSE73660	Hormones, Genes, and Athleticism: Effect of Androgens on the Avian Muscular Transcriptome	Expression profiling by high throughput sequencing	Manacus vitellinus Taeniopygia guttata	24	TXT SRA Run Selector	Jae-Hyung Lee	Mar 30, 2016
GSE96843	Weighted gene coexpression analysis of RNA-seq data from 65d juvenile Area X and adjacent non-song ventral striatopallidum (VSP).	Expression profiling by high throughput sequencing	Taeniopygia guttata	38	TSV SRA Run Selector	Zachary Daniel Burkett	Jan 25, 2018
GSE121348	Transcriptomics of the Avian Immune Response in Hypothalamus, Spleen, and Red Blood Cells using RNA-seq	Expression profiling by high throughput sequencing	Taeniopygia guttata	24	TXT SRA Run Selector	Eric Christian Rouchka	Jul 17, 2019
GSE136086	Functional Identification of Specialized Basal Ganglia Circuits that Regulate Vocal Motor Sequences	Expression profiling by high throughput sequencing	Taeniopygia guttata	2	TXT SRA Run Selector	Genevieve Konopka	May 19, 2021
GSE140470	Transcriptome profiling of the HVC of the young and adult zebra finch brain by RNA-Seq	Expression profiling by high throughput sequencing	Taeniopygia guttata	5	XLSX SRA Run Selector	XiaoChing Li	Jan 01, 2020
GSE147972	DNA methylation regulates transcription factor specific neurodevelopmental but not sexually dimorphic gene expression dynamics in zebra finch telencephalon [RNA-Seq]	Expression profiling by high throughput sequencing	Taeniopygia guttata	24	TXT SRA Run Selector	Jeroen Galle	Apr 07, 2021
GSE153665	Single-nuclei RNA sequencing of HVC and RA in zebra finches	Expression profiling by high throughput sequencing	Taeniopygia guttata	4	TXT SRA Run Selector	Genevieve Konopka	Feb 12, 2021
GSE165119	A conserved paint box underlies color pattern diversity in Estrildid finches.	Expression profiling by high throughput sequencing	Taeniopygia guttata	21	TXT SRA Run Selector	Noémie Robil	Jan 18, 2024
GSE177478	Single-cell Next Generation Sequencing (scNGS) facilitates analysis of gonadal single cells transcriptomes and revealed germ cell heterogeneity	Expression profiling by high throughput sequencing	Taeniopygia guttata	2	H5 MTX TSV SRA Run Selector	JAE YONG HAN	Dec 13, 2021
GSE185196	How thermal challenges change gene regulation in the songbird brain and gonad: implications for sexual selection in our changing world	Expression profiling by high throughput sequencing	Taeniopygia guttata	46	TSV SRA Run Selector	Kimberly A Rosvall	Oct 01, 2022
GSE191296	Emergence of sex-specific transcriptomes in a sexually-dimorphic brain nucleus	Expression profiling by high throughput sequencing	Taeniopygia guttata	22	TSV	Claudio V Mello	Jul 14, 2022
GSE195934	Single-cell RNA sequencing of the CFS414 zebra finch cell line	Expression profiling by high throughput sequencing	Taeniopygia guttata	2	MTX TSV	Matthew T Biegler	Feb 04, 2022