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Platform GPL16571 Query DataSets for GPL16571
Status Public on Jan 30, 2013
Title Agilent-026440 Sus scrofa (Pig) Oligo Microarray v2 (Probe Name version)
Technology type in situ oligonucleotide
Distribution commercial
Organism Sus scrofa
Manufacturer Agilent Technologies
Manufacture protocol See manufacturer's web site at http://www.agilent.com/
 
Description Sus scrofa (Pig) Oligo Microarray v2

Arrays of this design have barcodes that begin with 16026440 or 2526440.
 
Submission date Jan 30, 2013
Last update date Jan 30, 2013
Organization Agilent Technologies
E-mail(s) cag_sales-na@agilent.com
Phone 877-424-4536
URL http://www.agilent.com
Department
Street address
City Palo Alto
State/province CA
ZIP/Postal code 94304
Country USA
 
Samples (596) GSM1074379, GSM1074381, GSM1074392, GSM1074394, GSM1074396, GSM1074398 
Series (42)
GSE43917 Long term intake of pea fiber affects the colonic barrier, bacterial and transcriptional profile using pig as model
GSE47397 Gene expression profiling in porcine chronic myocardial ischemia treated with intramyocardial injections of secretome
GSE48050 Suckling piglets: Control vs. weaned piglets
Relations
Alternative to GPL15007

Data table header descriptions
ID Agilent Probe Name
SPOT_ID Spot Identifier
CONTROL_TYPE Control Type
REFSEQ RefSeq Identifier
GB_ACC GenBank or RefSeq Accession
LOCUSLINK_ID LocusLink ID
GENE_SYMBOL Gene Symbol
GENE_NAME Gene Name
UNIGENE_ID UniGene ClusterID
ENSEMBL_ID Ensembl ID
ACCESSION_STRING Accession String
CHROMOSOMAL_LOCATION Chromosomal Location
DESCRIPTION Description
GO_ID GO IDs
SEQUENCE Sequence

Data table
ID SPOT_ID CONTROL_TYPE REFSEQ GB_ACC LOCUSLINK_ID GENE_SYMBOL GENE_NAME UNIGENE_ID ENSEMBL_ID ACCESSION_STRING CHROMOSOMAL_LOCATION DESCRIPTION GO_ID SEQUENCE
A_72_P000001 A_72_P000001 FALSE AJ949619 Ssc.69874 gb|AJ949619 unmapped AJ949619 KN404_1 Sus scrofa cDNA clone C0007746c12 3', mRNA sequence [AJ949619] TGATGTATCTTGAGGCGTGACTTCCATATGAAGGCCTTTCCACAGCCGTTGCACTTATAA
A_72_P000006 A_72_P000006 FALSE EW533748 Ssc.47748 gb|EW533748|tc|TC571925 unmapped rret19_e18.y1 ret Sus scrofa cDNA 5', mRNA sequence [EW533748] TCCTGAAGTTCACCCTGTTTCTGGTGATTAAGGAGAACAATGCAACTGATGTCAAGACCG
A_72_P000036 A_72_P000036 FALSE tc|TC560237|tc|TC557223 unmapped Rep: Predicted protein - Chlamydomonas reinhardtii, partial (3%) [TC560237] GGATACAGGCTTCCCAGCTTCTCCTTTGAGATCCTCTCCCCTGGATGAAGGCTGATGACC
A_72_P000041 A_72_P000041 FALSE unmapped CATAATTAAATTATCTGCTTTCACTGTGCCATAGGAAGTATCTGCCATTTCCTCTTCTTT
A_72_P000051 A_72_P000051 FALSE CN162710 Ssc.47760 gb|CN162710 unmapped 952122 MARC 4PIG Sus scrofa cDNA 3', mRNA sequence [CN162710] GATTTCCTTCATAGACTGAAAACCCTTCATAAATCCATAGTAAGATGTCTGAAAAGACCT
A_72_P000056 A_72_P000056 FALSE unmapped GAACAATGATGCCTGATGTTTTCTCCGACGTGTACTCCTGCTGAAATTGAGACATGCTTC
A_72_P000061 A_72_P000061 FALSE unmapped TTGGCATCAGTGTACAGAGGCAGCCGATATTTTAGGAACAAAACCCGTATAACTAGCACC
A_72_P000071 A_72_P000071 FALSE tc|TC546991 unmapped Rep: Uncharacterized protein C15orf41 homolog - Bos taurus (Bovine), partial (46%) [TC546991] CTCAGAATAGGAGGGAGACTTTTGTAAATGACAAAAATAAAAGGGATGTGACTGTAGCAT
A_72_P000076 A_72_P000076 FALSE XM_001929523 100154922 SH2B3 SH2B adaptor protein 3 Ssc.38298 gb|XM_001929523|tc|TC578027 unmapped PREDICTED: Sus scrofa SH2B adaptor protein 3 (SH2B3), mRNA [XM_001929523] TGTCAAGCGCTGGCGGCGGAAATGATGAGGCGCTGGCCATTTTCCGAGCCTGGGTTTCCT
A_72_P000086 A_72_P000086 FALSE unmapped TTATTAGCATAGACGACCGTTACAGCTGAATGTCTGTAACAGCTGCCCTATGTCCACTAC
A_72_P000106 A_72_P000106 FALSE DY431821 Ssc.47774 gb|DY431821 unmapped 1556593 MARC 3PIG Sus scrofa cDNA 3', mRNA sequence [DY431821] ACTGGTTTCCACTCTGGGAAAATACAATCTTTACAACTATAACTGGTATCAGCAGATCAA
A_72_P000111 A_72_P000111 FALSE AK349235 gb|AK349235|tc|TC548456 unmapped Sus scrofa mRNA, clone:PTG010027F03, expressed in pituitary gland. [AK349235] ATATTTGTGTTCGCTTTGGGACGGGTCTTCCGTTTCATCTCATGCTTTATTTGTAAGATG
A_72_P000131 A_72_P000131 FALSE DY426195 Ssc.47779 gb|DY426195|tc|TC584404 unmapped 1545231 MARC 3PIG Sus scrofa cDNA 5', mRNA sequence [DY426195] TTTTTTAAAAAATAAGGTGTCCAGTAAAGCTGGCATGGGAGCGGTTGGCAGGGACTAGGT
A_72_P000136 A_72_P000136 FALSE unmapped ATAAGCCAGGACTTGACATCTAAATTGAGTGTTGACCTCTGGCACCAAAATCGGTGCCTT
A_72_P000146 A_72_P000146 FALSE unmapped GTGTCATCCTTGTTGTCAGGATATGGTTCAACAAAACCGTACATGTGGATCAGTTGCCAA
A_72_P000156 A_72_P000156 FALSE unmapped CAGAAAGGTCTTAATTTCACTGCCATGGACATTCCAGCTTTGCCTATGCTTTCCAGTGAG
A_72_P000171 A_72_P000171 FALSE AK344114 100154314 SHPRH SNF2 histone linker PHD RING helicase Ssc.41092 ENSSSCT00000004555 ens|ENSSSCT00000004555|gb|AK344114|gb|XM_001924790|tc|TC524220 unmapped Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:F1S736] [ENSSSCT00000004555] AGGTATTTCAGTGGAATCATCCTTCAGTGGTGAAATGTTAGAAGATTTGGGGTGGCTGCC
A_72_P000176 A_72_P000176 FALSE unmapped TGGGGCTTTATTTTCAGTGTCTCTGTCCTTTCTCTTGGGTTCCCCTTGAGTATTTACTGC
A_72_P000186 A_72_P000186 FALSE tc|TC550967 unmapped TTTCTCAAGCTGTCTTTGTGCTTTAAGGCTGGACACAGAGGATGACACCTTTCTGTTGGT
A_72_P000196 A_72_P000196 FALSE CF180809 Ssc.47792 gb|CF180809 unmapped 815964 MARC 3PIG Sus scrofa cDNA 3', mRNA sequence [CF180809] TTACCGCAGTGTACCTTTTTGCAACAAAGACCACACCTTACATATTGCAAGTGCTCAATG

Total number of rows: 43663

Table truncated, full table size 10434 Kbytes.




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