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Platform GPL1699 Query DataSets for GPL1699
Status Public on Sep 13, 2005
Title MWG rat 10k oligo set
Technology type spotted oligonucleotide
Distribution non-commercial
Organism Rattus norvegicus
 
Description Normal rat transcriptomes of six organs: lung, heart, kidney, liver, spleen and brain were obtained using a novel DNA microarray hybridization system. In this system, six organs were hybridized simultaneously on one glass slide.
Keywords = Transcriptome
Keywords = parallel hybridization
Keywords = microarray
 
Contributor(s) Chen Z, Chen J, Weng T, Liu L
Submission date Nov 11, 2004
Last update date Jan 18, 2013
Contact name Zhongming Chen
E-mail(s) zhongmi@okstate.edu
Phone 405-744-0329
URL http://www.cvm.okstate.edu/research/Facilities/LungBiologyLab/
Organization name Oklahoma State University
Department Deptment of Physiological Sciences
Lab Lin Liu Lab
Street address 264 McElroy Hall
City Stillwater
State/province OK
ZIP/Postal code 74078
Country USA
 
Samples (188) GSM35086, GSM35087, GSM35088, GSM35147, GSM35148, GSM35150 
Series (5)
GSE1963 Parallel Hybridizations of six organs
GSE2160 Transcriptomes of Alveolar epithelial cells
GSE2707 Gene expression profiles in AEC II during hyperoxia exposure and recovery

Data table header descriptions
ID
Name Gene name and description
Block Sub-grid (sub-array) number
Column Column number in a block
Row Row number in a block

Data table
ID Name Block Column Row
AF007818 leptin receptor ob-rc 1 1 1
AF027331 glutamate receptor subunit kainate subtype glur7; glur7b 1 2 1
AF032925 vascular endothelial growth factor b 186 precursor 1 3 1
AF046886 axl receptor tyrosine kinase 1 4 1
S79292 rat hypoxanthine-guanine phosphoribosyltransferase hprt; hypoxanthine guanine phosphoribosyl transferase; phosporibosyltransferase 1 5 1
NM_053986 myosin i heavy chain myr1; ib myo1b 1 6 1
NM_019360 cytochrome c oxidase subunit vic cox-vic; cox6c 1 7 1
M35602 beta-fibrinogen 1 8 1
M64391 olfactory protein 1 9 1
S48142 t-kininogenase 1 10 1
AB050745 calcium activated potassium channel beta1c subunit kcnmb1c 1 11 1
NM_030838 organic anion transporting polypeptide 3 slc21a7; transporter protein 1 12 1
NM_017026 myelin basic protein mbp 1 13 1
NM_053295 calpastatin probably multiple splicing products cast; calpastatin/canp inhibitor 1 14 1
NM_023101 snare vti1a-beta protein vti1-pending; vti1a 1 15 1
U60562 amelogenin 1 16 1
NM_012873 protamine 2 prm2 1 17 1
M25823 leukocyte-common antigen precursor; leukocyte common; l-ca variant 4 1 18 1
NM_019323 mast-cell protease 8 precursor rmcp-8; 9 mcpt9; mcpt8; rmcp-9; granzyme j rnkp-5; granzyme-like protein ii 1 19 1
NM_053655 dynamin-like protein dlp1 isoform dlp1-37; splice variant 1; 2; 3; 4; dynamin 1-like dnm1l 1 20 1

Total number of rows: 10000

Table truncated, full table size 993 Kbytes.




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Supplementary data files not provided

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