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Status
Public on Nov 08, 2013
Title
NimbleGen 090918 Vitus vinifera exp HX12 [090918_Vitus_exp; GENE_CALL_ID version]
Technology type
in situ oligonucleotide
Distribution
custom-commercial
Organism
Vitis vinifera Manufacturer
NimbleGen
Manufacture protocol
Standard NimbleGen manufacture protocol.
Catalog number
05224691001
Support
glass
Description
12-plex array with 135,000 features per subarray.
Web link
http://www.nimblegen.com/products/expression/custom/grape/index.html Submission date
Nov 06, 2013
Last update date
Feb 26, 2016
Contact name
Pablo Carbonell-Bejerano
E-mail(s)
pablo.carbonell@icvv.es Organization name
CSIC
Department
Instituto de las Ciencias de la Vid y del Vino
Street address
Madre de Dios, 51
City
Logrono
State/province
La Rioja
ZIP/Postal code
26006
Country
Spain
Samples (946)
GSM1260587 , GSM1260588 , GSM1260589 , GSM1260590 , GSM1260591 , GSM1260592
GSM1260593 ,
GSM1260594 ,
GSM1260595 ,
GSM1260596 ,
GSM1260597 ,
GSM1260598 ,
GSM1260599 ,
GSM1260600 ,
GSM1260601 ,
GSM1260602 ,
GSM1260603 ,
GSM1260604 ,
GSM1260605 ,
GSM1260606 ,
GSM1260607 ,
GSM1260608 ,
GSM1260609 ,
GSM1260610 ,
GSM1260611 ,
GSM1260612 ,
GSM1260613 ,
GSM1260614 ,
GSM1260615 ,
GSM1260616 ,
GSM1260617 ,
GSM1260618 ,
GSM1260619 ,
GSM1260620 ,
GSM1260621 ,
GSM1260622 ,
GSM1260623 ,
GSM1260624 ,
GSM1260625 ,
GSM1260626 ,
GSM1260627 ,
GSM1260628 ,
GSM1260629 ,
GSM1260630 ,
GSM1260631 ,
GSM1260632 ,
GSM1260633 ,
GSM1260634 ,
GSM1260635 ,
GSM1260636 ,
GSM1260637 ,
GSM1260638 ,
GSM1260639 ,
GSM1260640 ,
GSM1269432 ,
GSM1269433 ,
GSM1269434 ,
GSM1269435 ,
GSM1269436 ,
GSM1269438 ,
GSM1269439 ,
GSM1269440 ,
GSM1269441 ,
GSM1269442 ,
GSM1269443 ,
GSM1269444 ,
GSM1269445 ,
GSM1269446 ,
GSM1269447 ,
GSM1269448 ,
GSM1269449 ,
GSM1269450 ,
GSM1269451 ,
GSM1269452 ,
GSM1269453 ,
GSM1269454 ,
GSM1269455 ,
GSM1269456 ,
GSM1269457 ,
GSM1269458 ,
GSM1269459 ,
GSM1269460 ,
GSM1269461 ,
GSM1269462 ,
GSM1272068 ,
GSM1272069 ,
GSM1272070 ,
GSM1272071 ,
GSM1272072 ,
GSM1272073 ,
GSM1272074 ,
GSM1272075 ,
GSM1272076 ,
GSM1272077 ,
GSM1272078 ,
GSM1272079 ,
GSM1276769 ,
GSM1276770 ,
GSM1276771 ,
GSM1276772 ,
GSM1276773 ,
GSM1276774 ,
GSM1276775 ,
GSM1276776 ,
GSM1276777 ,
GSM1276778 ,
GSM1276779 ,
GSM1276780 ,
GSM1276781 ,
GSM1276782 ,
GSM1276783 ,
GSM1276784 ,
GSM1276785 ,
GSM1276786 ,
GSM1276787 ,
GSM1276788 ,
GSM1276789 ,
GSM1276790 ,
GSM1276791 ,
GSM1276792 ,
GSM1291011 ,
GSM1291012 ,
GSM1291013 ,
GSM1291014 ,
GSM1291015 ,
GSM1291016 ,
GSM1291017 ,
GSM1291018 ,
GSM1291019 ,
GSM1291020 ,
GSM1291021 ,
GSM1291022 ,
GSM1291023 ,
GSM1291024 ,
GSM1291025 ,
GSM1291026 ,
GSM1291027 ,
GSM1291028 ,
GSM1291029 ,
GSM1291030 ,
GSM1291031 ,
GSM1291032 ,
GSM1291033 ,
GSM1291034 ,
GSM1291035 ,
GSM1291036 ,
GSM1291037 ,
GSM1291038 ,
GSM1291039 ,
GSM1291040 ,
GSM1291041 ,
GSM1291042 ,
GSM1291043 ,
GSM1291044 ,
GSM1320336 ,
GSM1320337 ,
GSM1320338 ,
GSM1320339 ,
GSM1320340 ,
GSM1320341 ,
GSM1320342 ,
GSM1320343 ,
GSM1320344 ,
GSM1320345 ,
GSM1320346 ,
GSM1320347 ,
GSM1333815 ,
GSM1333816 ,
GSM1333817 ,
GSM1333818 ,
GSM1333819 ,
GSM1333820 ,
GSM1333821 ,
GSM1333822 ,
GSM1436885 ,
GSM1436886 ,
GSM1436887 ,
GSM1436888 ,
GSM1436889 ,
GSM1436890 ,
GSM1621382 ,
GSM1621383 ,
GSM1621384 ,
GSM1621385 ,
GSM1621386 ,
GSM1621387 ,
GSM1621388 ,
GSM1621389 ,
GSM1621390 ,
GSM1621391 ,
GSM1621392 ,
GSM1621393 ,
GSM1621394 ,
GSM1621395 ,
GSM1621396 ,
GSM1621397 ,
GSM1621398 ,
GSM1621399 ,
GSM1621400 ,
GSM1621401 ,
GSM1621402 ,
GSM1621403 ,
GSM1621404 ,
GSM1621405 ,
GSM1621406 ,
GSM1621407 ,
GSM1621408 ,
GSM1621409 ,
GSM1621410 ,
GSM1621411 ,
GSM1621412 ,
GSM1621413 ,
GSM1621414 ,
GSM1621415 ,
GSM1621416 ,
GSM1621417 ,
GSM1621418 ,
GSM1621419 ,
GSM1621420 ,
GSM1621421 ,
GSM1621422 ,
GSM1621423 ,
GSM1621424 ,
GSM1621425 ,
GSM1621426 ,
GSM1621427 ,
GSM1621428 ,
GSM1621429 ,
GSM1697076 ,
GSM1697077 ,
GSM1697078 ,
GSM1697079 ,
GSM1697080 ,
GSM1697081 ,
GSM1816199 ,
GSM1816200 ,
GSM1816201 ,
GSM1816202 ,
GSM1816203 ,
GSM1816204 ,
GSM1816205 ,
GSM1816206 ,
GSM1816207 ,
GSM1816208 ,
GSM1816209 ,
GSM1816210 ,
GSM1816211 ,
GSM1816212 ,
GSM1816213 ,
GSM1816214 ,
GSM1816215 ,
GSM1816216 ,
GSM1816217 ,
GSM1816218 ,
GSM1816219 ,
GSM1816220 ,
GSM1816221 ,
GSM1816222 ,
GSM1816223 ,
GSM1816224 ,
GSM1816225 ,
GSM1816226 ,
GSM1816227 ,
GSM1816228 ,
GSM1816229 ,
GSM1816230 ,
GSM1816231 ,
GSM1816232 ,
GSM1816233 ,
GSM1816234 ,
GSM1816235 ,
GSM1816236 ,
GSM1816237 ,
GSM1816238 ,
GSM1816239 ,
GSM1816240 ,
GSM1816241 ,
GSM1816242 ,
GSM1816243 ,
GSM1816244 ,
GSM1816245 ,
GSM1816246 ,
GSM1816247 ,
GSM1816248 ,
GSM1816249 ,
GSM1816250 ,
GSM1816251 ,
GSM1816252 ,
GSM1816253 ,
GSM1816254 ,
GSM1816255 ,
GSM1816256 ,
GSM1816257 ,
GSM1816258 ,
GSM1816259 ,
GSM1816260 ,
GSM1816261 ,
GSM1816262 ,
GSM1816263 ,
GSM1816264 ,
GSM1816265 ,
GSM1816266 ,
GSM1816267 ,
GSM1816268 ,
GSM1816269 ,
GSM1816270 ,
GSM1816271 ,
GSM1816272 ,
GSM1816273 ,
GSM1816274 ,
GSM1816275 ,
GSM1816276 ,
GSM1816277 ,
GSM1816278 ,
GSM1816279 ,
GSM1816280 ,
GSM1816281 ,
GSM1816282 ,
GSM1862195 ,
GSM1862196 ,
GSM1862197 ,
GSM1862198 ,
GSM1862199 ,
GSM1862200 ,
GSM1862201 ,
GSM1862202 ,
GSM1862203 ,
GSM1862204 ,
GSM1862205 ,
GSM1862206 ,
GSM1862207 ,
GSM1862208 ,
GSM1862209 ,
GSM1862210 ,
GSM1862211 ,
GSM1862212 ,
GSM1862213 ,
GSM1862214 ,
GSM1862215 ,
GSM1862216 ,
GSM1862217 ,
GSM1862218 ,
GSM1862219 ,
GSM1862220 ,
GSM1862221 ,
GSM1862222 ,
GSM1862223 ,
GSM1862224 ,
GSM1862225 ,
GSM1862226 ,
GSM1862227 ,
GSM1862228 ,
GSM1862229 ,
GSM1862230 ,
GSM1862231 ,
GSM1862232 ,
GSM1862233 ,
GSM1862234 ,
GSM1862235 ,
GSM1862236 ,
GSM1862237 ,
GSM1862238 ,
GSM1862239 ,
GSM1862240 ,
GSM1862241 ,
GSM1862242 ,
GSM1862243 ,
GSM1862244 ,
GSM1957815 ,
GSM1957816 ,
GSM1957817 ,
GSM1957818 ,
GSM1957819 ,
GSM1957820 ,
GSM1957821 ,
GSM1957822 ,
GSM1957823 ,
GSM1957824 ,
GSM1957825 ,
GSM1957826 ,
GSM1957827 ,
GSM1957828 ,
GSM1957829 ,
GSM1957830 ,
GSM1957831 ,
GSM1957832 ,
GSM1957833 ,
GSM1957834 ,
GSM1957835 ,
GSM1957836 ,
GSM1957837 ,
GSM1957838 ,
GSM1957839 ,
GSM1957840 ,
GSM1957841 ,
GSM1957842 ,
GSM1957843 ,
GSM1957844 ,
GSM1957845 ,
GSM1957846 ,
GSM1957847 ,
GSM1957848 ,
GSM1957849 ,
GSM1957850 ,
GSM1957851 ,
GSM1957852 ,
GSM1957853 ,
GSM1957854 ,
GSM1957855 ,
GSM1957856 ,
GSM1957857 ,
GSM1957858 ,
GSM1957859 ,
GSM1957860 ,
GSM1957861 ,
GSM1957862 ,
GSM1957863 ,
GSM1957864 ,
GSM1957865 ,
GSM1957866 ,
GSM1957867 ,
GSM1957868 ,
GSM1957869 ,
GSM1957870 ,
GSM1957871 ,
GSM1957872 ,
GSM1957873 ,
GSM1957874 ,
GSM1957875 ,
GSM1957876 ,
GSM1957877 ,
GSM1957878 ,
GSM1957879 ,
GSM1957880 ,
GSM1957881 ,
GSM1957882 ,
GSM1957883 ,
GSM1957884 ,
GSM1957885 ,
GSM1957886 ,
GSM1957887 ,
GSM1957888 ,
GSM1957889 ,
GSM1957890 ,
GSM1957891 ,
GSM1957892 ,
GSM1957893 ,
GSM1957894 ,
GSM1957895 ,
GSM1957896 ,
GSM1957897 ,
GSM1957898 ,
GSM1957899 ,
GSM1957900 ,
GSM1957901 ,
GSM1959042 ,
GSM1959043 ,
GSM1959044 ,
GSM1959045 ,
GSM1959046 ,
GSM1959047 ,
GSM1959048 ,
GSM1959049 ,
GSM1959050 ,
GSM1959051 ,
GSM1959052 ,
GSM1959053 ,
GSM1959054 ,
GSM1959055 ,
GSM1959056 ,
GSM1959057 ,
GSM1959058 ,
GSM1959059 ,
GSM1959060 ,
GSM1959061 ,
GSM1959062 ,
GSM1959063 ,
GSM1959064 ,
GSM1959065 ,
GSM1959066 ,
GSM1959067 ,
GSM1959068 ,
GSM1959069 ,
GSM1959070 ,
GSM1959071 ,
GSM1959072 ,
GSM1959073 ,
GSM1959074 ,
GSM1959075 ,
GSM1959076 ,
GSM1959077 ,
GSM1959078 ,
GSM1959079 ,
GSM1959080 ,
GSM1959081 ,
GSM1959082 ,
GSM1959083 ,
GSM1959084 ,
GSM1959085 ,
GSM1959086 ...
Accession list truncated, click here to browse through all related public accessions You can also download a list of all accessions here Series (27)
GSE52167 Circadian expression profiling in grapevine ripening berries
GSE52540 A microarray analysis highlights the role of tetrapyrrole pathways in grapevine responses to stolbur phytoplasma, phloem virus infections and recovered status
GSE52586 Transcript and metabolite analysis of Vitis vinifera cv. Trincadeira berries infected with Botrytis cinerea reveals an activation of a non-sustained plant defense response
GSE52829 The Transcriptomic Regulation of Berry Development is More Important at Night than During the Day
GSE53409 Night heat stress triggered different transcriptomic responses than day stress in green and ripening grapevine (Vitis vinifera) fruits
GSE54636 Effect of solar ultraviolet radiation on grape berry skin transcriptome
GSE55302 Transcriptomic analysis of the late stages of grapevine (Vitis vinifera cv. Cabernet Sauvignon) berry ripening indicates significant induction of ethylene signaling and flavor pathways in the skin.
GSE59436 Transcriptome analyses of grape berry skin induced by UV irradiation.
GSE66391 Water limitation and rootstock genotype interact to alter grape berry metabolism through transcriptome reprogramming
GSE69282 Analysis of the origin of parthenocarpy in Corinto Bianco grapes
GSE70670 Distinct transcriptome responses to water limitation in isohydric and anisohydric grapevine cultivars
GSE72421 Five Omic Technologies Are Concordant in Differentiating the Biochemical Characteristics of the Berries of Five Grapevine (Vitis vinifera L.) Cultivars
GSE75498 Disclosing the Molecular Basis of the Postharvest Life of Berry in Different Grapevine Genotypes
GSE75565 Plasticity of the berry ripening program in a white grape variety
GSE75998 Transcriptome differences among Albariño densimetrically-sorted berries
GSE75999 Response of Tempranillo grapes to immersion in a concentrated NaCl solution
GSE76000 Reducing sampling bias in molecular studies of grapevine fruit ripening: transcriptomic assessment of the density sorting method
GSE78798 Abscisic Acid Transcriptomic Signaling Varies with Grapevine Organ
GSE78920 Transcriptomic network analyses of leaf dehydration responses identify highly connected ABA and ethylene signaling hubs in three grapevine species differing in drought tolerance
GSE86551 Dissecting the biochemical and transcriptomic effects of locally applied heat stress on developing Cabernet Sauvignon grape berries
GSE92864 Whole Plant Temperature Manipulation Affects Flavonoid Metabolism and the Transcriptome of Grapevine Berries
GSE92980 Transcriptional Responses to Pre-flowering Leaf Defoliation in Grapevine Berry from Different Growing Sites, Years, and Genotypes
GSE97578 Grapevine field experiments reveal the contribution of genotype, the influence of environment and the effect of their interaction (GXE) on the berry transcriptome [array]
GSE106668 The major origin of seedless grapes is associated with a missense mutation in the MADS-box gene VviAGL11
GSE111468 The MYB5-driven MBW complex recruits a WRKY factor to enhance the expression of targets involved in vacuolar hyper-acidification and trafficking in grapevine
GSE132262 Auxin treatment of grapevine (Vitis vinifera L.) berries delays ripening onset by inhibiting cell expansion
GSE138021 RAPID DEHYDRATION OF GRAPE BERRIES DAMPENS THE POST-RIPENING TRANSCRIPTOMIC PROGRAM AND THE METABOLITEPROFILE EVOLUTION
Relations Alternative to
GPL13936
Data table header descriptions ID GENE_CALL_ID
GENE_INFO PT_ACC Protein accession
SPOT_ID
Data table ID GENE_INFO PT_ACC SPOT_ID CHR10_JGVV116_1_T01
chr10.jigsawgaze_integrato.gff_no_repeat_PROT_JGVv116.1.t01
CBI23156 CHR10_JGVV116_1_T01
CHR10_JGVV116_2_T01
chr10.jigsawgaze_integrato.gff_no_repeat_PROT_JGVv116.2.t01
CBI23157 CHR10_JGVV116_2_T01
CHR10_JGVV116_3_T01
chr10.jigsawgaze_integrato.gff_no_repeat_PROT_JGVv116.3.t01
CCB48152 CHR10_JGVV116_3_T01
CHR10_JGVV116_4_T01
chr10.jigsawgaze_integrato.gff_no_repeat_PROT_JGVv116.4.t01
CCB48153 CHR10_JGVV116_4_T01
CHR10_JGVV116_5_T01
chr10.jigsawgaze_integrato.gff_no_repeat_PROT_JGVv116.5.t01
CCB48156 CHR10_JGVV116_5_T01
CHR10_JGVV116_6_T01
chr10.jigsawgaze_integrato.gff_no_repeat_PROT_JGVv116.6.t01
CCB48157 CHR10_JGVV116_6_T01
CHR10_JGVV116_8_T01
chr10.jigsawgaze_integrato.gff_no_repeat_PROT_JGVv116.8.t01
CCB48158 CHR10_JGVV116_8_T01
CHR10_JGVV116_9_T01
chr10.jigsawgaze_integrato.gff_no_repeat_PROT_JGVv116.9.t01
CCB48159 CHR10_JGVV116_9_T01
CHR10_JGVV116_10_T01
chr10.jigsawgaze_integrato.gff_no_repeat_PROT_JGVv116.10.t01
CBI23163 CHR10_JGVV116_10_T01
CHR10_JGVV116_11_T01
chr10.jigsawgaze_integrato.gff_no_repeat_PROT_JGVv116.11.t01
CBI23164 CHR10_JGVV116_11_T01
CHR10_JGVV116_12_T01
chr10.jigsawgaze_integrato.gff_no_repeat_PROT_JGVv116.12.t01
CCB48160 CHR10_JGVV116_12_T01
CHR10_JGVV116_13_T01
chr10.jigsawgaze_integrato.gff_no_repeat_PROT_JGVv116.13.t01
CCB48161 CHR10_JGVV116_13_T01
CHR10_JGVV116_14_T01
chr10.jigsawgaze_integrato.gff_no_repeat_PROT_JGVv116.14.t01
CBI23166 CHR10_JGVV116_14_T01
CHR10_JGVV116_15_T01
chr10.jigsawgaze_integrato.gff_no_repeat_PROT_JGVv116.15.t01
CCB48162 CHR10_JGVV116_15_T01
CHR10_JGVV116_16_T01
chr10.jigsawgaze_integrato.gff_no_repeat_PROT_JGVv116.16.t01
CCB48163 CHR10_JGVV116_16_T01
CHR10_JGVV116_17_T01
chr10.jigsawgaze_integrato.gff_no_repeat_PROT_JGVv116.17.t01
CBI23169 CHR10_JGVV116_17_T01
CHR10_JGVV116_18_T01
chr10.jigsawgaze_integrato.gff_no_repeat_PROT_JGVv116.18.t01
CBI23170 CHR10_JGVV116_18_T01
CHR10_JGVV116_19_T01
chr10.jigsawgaze_integrato.gff_no_repeat_PROT_JGVv116.19.t01
CCB48164 CHR10_JGVV116_19_T01
CHR10_JGVV116_20_T01
chr10.jigsawgaze_integrato.gff_no_repeat_PROT_JGVv116.20.t01
CCB48165 CHR10_JGVV116_20_T01
CHR10_JGVV116_21_T01
chr10.jigsawgaze_integrato.gff_no_repeat_PROT_JGVv116.21.t01
CBI23173 CHR10_JGVV116_21_T01
29971 3237 Kbytes .Supplementary file Size Download File type/resource GPL17894_090918_Vitus_exp.ndf.gz
7.9 Mb
(ftp) (http) NDF
GPL17894_090918_Vitus_exp.ngd.gz
182.0 Kb
(ftp) (http) NGD
GPL17894_090918_Vitus_exp.pos.gz
99 b
(ftp) (http) POS
GPL17894_090918_Vitus_exp_HX12.ncd.gz
309 b
(ftp) (http) NCD
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