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Platform GPL18509

Query DataSets for GPL18509

Status

Public on Apr 01, 2014

Title

Agilent-021827 Human miRNA Microarray G4470C (miRNA ID version)

Technology type

in situ oligonucleotide

Distribution

custom-commercial

Organism

Homo sapiens

Manufacturer

Agilent Technologies

Manufacture protocol

see manufacturer's web site at http://www.agilent.com/

Catalog number

G4470C

Description

Arrays of this design have barcodes that begin with 16021827 or 2521827.
Features are numbered numbered Left-to-Right, Top-to-Bottom as scanned by an Agilent scanner (barcode on the left, DNA on the back surface, scanned through the glass), matching the FeatureNum output from Agilent's Feature Extraction software.
Human miRNA Microarray 3.0
Orientation:
Rows and columns are numbered as scanned by an Axon Scanner (barcode on the bottom, DNA on the front surface).
The ID column represents the Agilent Feature Extraction feature number.
To match data scanned on an Axon scanner, use the RefNumber column contained in the Agilent-provided GAL file as the ID_REF column in sample submissions.

Submission date

Apr 01, 2014

Last update date

Apr 01, 2014

Organization

Agilent Technologies

E-mail(s)

cag_sales-na@agilent.com

Phone

877-424-4536

URL

http://www.agilent.com

Department

Street address

City

Palo Alto

State/province

ZIP/Postal code

94304

Country

USA

Samples (79)

More...

GSM1361077, GSM1361078, GSM1361079, GSM1361080, GSM1361081, GSM1361082

Series (5)

More...

GSE56412	Development of micro RNA expression signatures for differential translation of protein isoforms.
GSE71130	Development of colorectal cancer miRNA expression signatures from expression profiles of embryonic development, precancer progression and cancer samples
GSE106645	Expression data from CTCL patient skin lesion [Agilent]

Relations

Alternative to

GPL14767

Data table header descriptions
ID	Agilent feature number
miRNA_ID	miRBase
ACCESSION_STRING	Accession String
SPOT_ID	Spot identifier

Data table
ID	miRNA_ID	ACCESSION_STRING	SPOT_ID
bkv-miR-B1-3p	bkv-miR-B1-3p	mir\|bkv-miR-B1-3p\|mir\|MIMAT0009150
bkv-miR-B1-5p	bkv-miR-B1-5p	mir\|bkv-miR-B1-5p\|mir\|MIMAT0009149
ebv-miR-BART1-3p	ebv-miR-BART1-3p	mir\|ebv-miR-BART1-3p\|mir\|MIMAT0003390
ebv-miR-BART1-5p	ebv-miR-BART1-5p	mir\|ebv-miR-BART1-5p\|mir\|MIMAT0000999
ebv-miR-BART10	ebv-miR-BART10	mir\|ebv-miR-BART10\|mir\|MIMAT0003420\|mir\|ebv-miR-BART10_v9.1\|mir\|MIMAT0003420
ebv-miR-BART10*	ebv-miR-BART10*	mir\|ebv-miR-BART10*\|mir\|MIMAT0004817
ebv-miR-BART11-3p	ebv-miR-BART11-3p	mir\|ebv-miR-BART11-3p\|mir\|MIMAT0003422
ebv-miR-BART11-5p	ebv-miR-BART11-5p	mir\|ebv-miR-BART11-5p\|mir\|MIMAT0003421
ebv-miR-BART12	ebv-miR-BART12	mir\|ebv-miR-BART12\|mir\|MIMAT0003423
ebv-miR-BART13	ebv-miR-BART13	mir\|ebv-miR-BART13\|mir\|MIMAT0003424
ebv-miR-BART13*	ebv-miR-BART13*	mir\|ebv-miR-BART13*\|mir\|MIMAT0004818
ebv-miR-BART14	ebv-miR-BART14	mir\|ebv-miR-BART14\|mir\|MIMAT0003426\|mir\|ebv-miR-BART14-3p_v9.1\|mir\|MIMAT0003426
ebv-miR-BART14*	ebv-miR-BART14*	mir\|ebv-miR-BART14*\|mir\|MIMAT0003425\|mir\|ebv-miR-BART14-5p_v9.1\|mir\|MIMAT0003425
ebv-miR-BART15	ebv-miR-BART15	mir\|ebv-miR-BART15\|mir\|MIMAT0003713
ebv-miR-BART16	ebv-miR-BART16	mir\|ebv-miR-BART16\|mir\|MIMAT0003714
ebv-miR-BART17-3p	ebv-miR-BART17-3p	mir\|ebv-miR-BART17-3p\|mir\|MIMAT0003716
ebv-miR-BART17-5p	ebv-miR-BART17-5p	mir\|ebv-miR-BART17-5p\|mir\|MIMAT0003715
ebv-miR-BART18-3p	ebv-miR-BART18-3p	mir\|ebv-miR-BART18-3p\|mir\|MIMAT0004835
ebv-miR-BART18-5p	ebv-miR-BART18-5p	mir\|ebv-miR-BART18-5p\|mir\|MIMAT0003717
ebv-miR-BART19-3p	ebv-miR-BART19-3p	mir\|ebv-miR-BART19-3p\|mir\|MIMAT0003718

Total number of rows: 962

Table truncated, full table size 62 Kbytes.

Download family	Format
SOFT formatted family file(s)	SOFT
MINiML formatted family file(s)	MINiML

Supplementary data files not provided