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Status
Public on Jun 08, 2015
Title
Agilent-050524 CMGG Human V2.0 60k
Technology type
in situ oligonucleotide
Distribution
custom-commercial
Organism
Homo sapiens Manufacturer
Agilent
Manufacture protocol
SurePrint
Submission date
May 05, 2014
Last update date
Oct 27, 2016
Contact name
Pieter mestdagh
E-mail(s)
pieter.mestdagh@ugent.be Organization name
Center for Medical Genetics
Street address
De Pintelaan 185
City
Gent
ZIP/Postal code
9000
Country
Belgium
Samples (109)
GSM1378156 , GSM1378157 , GSM1378158 , GSM1378159 , GSM1378160 , GSM1378161
GSM1378162 ,
GSM1378163 ,
GSM1378164 ,
GSM1378165 ,
GSM1378166 ,
GSM1378167 ,
GSM2121041 ,
GSM2121042 ,
GSM2121043 ,
GSM2121044 ,
GSM2121045 ,
GSM2121046 ,
GSM2121047 ,
GSM2121048 ,
GSM2121049 ,
GSM2121050 ,
GSM2121051 ,
GSM2121052 ,
GSM2121053 ,
GSM2121054 ,
GSM2121055 ,
GSM2121056 ,
GSM2121057 ,
GSM2121058 ,
GSM2302473 ,
GSM2302474 ,
GSM2302475 ,
GSM2302476 ,
GSM2302477 ,
GSM2302478 ,
GSM2302479 ,
GSM2302480 ,
GSM2302481 ,
GSM2302482 ,
GSM2302483 ,
GSM2302484 ,
GSM2302485 ,
GSM2302486 ,
GSM2302487 ,
GSM2302488 ,
GSM2362870 ,
GSM2362871 ,
GSM2362872 ,
GSM2362873 ,
GSM2362874 ,
GSM2362875 ,
GSM2362876 ,
GSM2362877 ,
GSM2362878 ,
GSM2362879 ,
GSM2362880 ,
GSM2362881 ,
GSM2362882 ,
GSM2362883 ,
GSM2362884 ,
GSM2362885 ,
GSM2362886 ,
GSM2362887 ,
GSM2362888 ,
GSM2362889 ,
GSM2362890 ,
GSM2362891 ,
GSM2362892 ,
GSM2362893 ,
GSM2362894 ,
GSM2362895 ,
GSM2362896 ,
GSM2362897 ,
GSM2864831 ,
GSM2864832 ,
GSM2864833 ,
GSM2864834 ,
GSM2864835 ,
GSM2864836 ,
GSM2864837 ,
GSM2864838 ,
GSM2864839 ,
GSM2864840 ,
GSM2864841 ,
GSM2864842 ,
GSM2864843 ,
GSM2864844 ,
GSM2864845 ,
GSM2864846 ,
GSM2864847 ,
GSM2864848 ,
GSM2864849 ,
GSM2864850 ,
GSM3664953 ,
GSM3664954 ,
GSM3664955 ,
GSM3664956 ,
GSM3664957 ,
GSM3664958 ,
GSM3664959 ,
GSM3664960 ,
GSM3664961 ,
GSM3664962 ,
GSM3664963 ,
GSM3664964 ,
GSM3664965 ,
GSM3664966 ,
GSM3664967 Series (6)
GSE57271 Novel culture conditions facilitating the induction of naïve pluripotency in human embryonic stem cells
GSE72792 Gene expression analysis of untreated and NT-shRNA transduced kidney proximal tubular epithelial cells (PTECs) at day 6 and day 16 after transduction, as well as SETD2-shRNA transduced PTECs at day 25 after transduction
GSE86432 Gene expression analysis to identify target genes of miR-150 in Burkitt lymphma cell lines
GSE89214 Gene expression analysis of kidney primary tubular epithelial cells (PTECs), SETD2-KD PTECs, PBRM1-KD PTECs and ccRCC derived cell lines
GSE107325 Microarray analysis to identify miRNA targetome of primary Burkitt lymphoma tumors in comparison to normal CD19+ B cells
GSE128103 Differential gene expression in leukemic blasts and leukemic stem cells (LSC) sorted from pediatric AML patients compared to control myeloblasts and hematopoietic stem cells (HSC) sorted from cord blood
Data table header descriptions ID ORF Gene Symbol
GB_ACC Genbank Accession
lncRNA_ID LNCipedia lncRNA ID
SEQUENCE probe sequence
SPOT_ID
Data table ID ORF GB_ACC lncRNA_ID SEQUENCE SPOT_ID GE_BrightCorner
--GE_BrightCorner
DarkCorner
--DarkCorner
PVD_LNCIPEDIA_2013_22480
lnc-PMM2-3:1
CCTATTGGGGCCACTGGGGAAAAGGCCCAGCAGCGAAACCAACTAGTCCAAGCCAGGCAA
lnc-PMM2-3:1
PVD_LNCIPEDIA_2013_5106
lnc-DLK1-8:1__lnc-DLK1-8:2__lnc-DLK1-8:3__lnc-DLK1-8:4
ATAGACGAGATTGGATTTGGTCATTTCCCCAAGGTGAAGAGCATGGCGATTTCTTCTGTG
lnc-DLK1-8:1__lnc-DLK1-8:2__lnc-DLK1-8:3__lnc-DLK1-8:4
A_23_P9582
TUFM
NM_003321
TTTGTGTCCCACTTCATGCCTGTCATGTTCTCCCTGACTTGGAACATGGCCTGTCGGATT
A_24_P370670
ZMYM6NB
NM_001195156
TACCAGCCAGATCCCCTGAACTACCAAATAGCTGTGGGCTTTCTGGAACTGCTGGCTGGG
A_24_P389959
COPZ1
NM_016057
GGATTATGCTCACATGCTCCCTTGCCCTGACATTTTTGTAAATTCTGTGCCCTTTGCTGT
A_33_P3401301
RPL39
NM_001000
AGCAAAATCGTCCCATTCCCCGGTGGATTCGGATGAAAACTGGTAATAAAATCACGTACA
PVD_LNCIPEDIA_2013_4006
lnc-CLDN16-2:1__lnc-CLDN16-2:2
TCTGGCCTCAGAACTCTCAGCATCTCATTGATTAGCAACCTCATCTGTGGCAAATCTAAG
lnc-CLDN16-2:1__lnc-CLDN16-2:2
A_23_P332399
GULP1
NM_016315
ATAACTGGTCATTAATTATGAACATTTACTTCTCCAGTGCGTTTTTATGAAGATCTGGTT
A_33_P3212909
ZFHX2
NM_033400
GGAGAAGATGCAGCTGCATGCCAGGGGTGCAGCCCACGAAGAAAACAGCCAAATCTATAA
A_33_P3359858
XR_109903
CATCACCTGCATGCTCACATGATTCCATTATTTGAGCTCATGGCAGGAAATAGAACCTGA
PVD_LNCIPEDIA_2013_21997
lnc-ANKH-2:1
TTTAGAATTGGCATAATGAGACAAAAGAGTCCACTGTGGGAAATTTTTGCTTATGCAATG
lnc-ANKH-2:1
A_23_P38505
CXCL16
NM_022059
CCTCTCTTAGGCCCCTCATTTAAAAACGGTTATACTATAAAATCTGCTTTTCACACTGGG
PVD_LNCIPEDIA_2013_10511
lnc-NDUFV2-1:5
GTTTGGTAAGCAGCTTTAGACTCATTTTAGTACCTTAACTTAAAATACCACTCTCGGCAC
lnc-NDUFV2-1:5
ERCC-00014_76
AGAGAAAAGCTTTACGGTAAAGAAGCGGGCGTGGAGTATGCCGAAGTTTCTTTTCCAAAC
ERCC-00014_76
PVD_LNCIPEDIA_2013_6908
lnc-GJA1-2:1
GCAGTCACACCTAAAGATCTTGTATAGTCTGAAATTATTAACGGTCAACTGGGTTTGAAG
lnc-GJA1-2:1
PVD_LNCIPEDIA_2013_9609
lnc-MCTP2-9:1
GGAAAGATAATCCACAAATACCGGACACTGTTTATTAGAGCCACATACGCTTGGAACCAT
lnc-MCTP2-9:1
PVD_LNCIPEDIA_2013_19603
lnc-MFAP4-3:1
CGTCCCTTTGGGCCCTGAGGAATAATACTGCTGGTTTAATTCAAGATATAAAACCAATAA
lnc-MFAP4-3:1
PVD_LNCIPEDIA_2013_18581
lnc-C22orf34-1:1
GTGAAACCCAGTGGGTTTTAATTGTGAATCAGCACCAAAACACATGCAGATTTAATTTTT
lnc-C22orf34-1:1
60236 6536 Kbytes .Supplementary data files not provided
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